Gvermi7043.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7043.t1
Unique NameGvermi7043.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length109
Homology
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BLAST of Gvermi7043.t1 vs. uniprot
Match: A0A2V3IED4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IED4_9FLOR)

HSP 1 Score: 92.4 bits (228), Expect = 3.320e-22
Identity = 47/65 (72.31%), Postives = 58/65 (89.23%), Query Frame = 0 
Query:   17 APTEVPSSPAVNDADIEAHRQIEDEVQQLLSEMHTSFKSFSDDIFTKIDQMEAKINELDETLVSL 81
            A T +PSSP+V DA+++AHRQIE EVQQLLSEM ++FKSFSD++FT+IDQMEAKI+ELD TL SL
Sbjct:   19 AATHLPSSPSVKDAEVDAHRQIEKEVQQLLSEMQSTFKSFSDNVFTQIDQMEAKISELDSTLKSL 83
The following BLAST results are available for this feature:
BLAST of Gvermi7043.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IED4_9FLOR3.320e-2272.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availableGENE3D1.20.5.430coord: 35..78
e-value: 1.5E-8
score: 36.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
IPR009643Heat shock factor binding 1PFAMPF06825HSBP1coord: 39..83
e-value: 1.9E-9
score: 37.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1242391..1242717 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7043.t1Gvermi7043.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1242391..1242717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7043.t1 ID=Gvermi7043.t1|Name=Gvermi7043.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=109bp
MNSAQDASAESQIAPAAPTEVPSSPAVNDADIEAHRQIEDEVQQLLSEMH
TSFKSFSDDIFTKIDQMEAKINELDETLVSLSKSVEPSAQRAGASDALSA
SPPKQTAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009643HS1-bd