Gvermi6906.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6906.t1
Unique NameGvermi6906.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length487
Homology
BLAST of Gvermi6906.t1 vs. uniprot
Match: A0A2V3IW81_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW81_9FLOR)

HSP 1 Score: 711 bits (1836), Expect = 1.020e-254
Identity = 338/486 (69.55%), Postives = 407/486 (83.74%), Query Frame = 0
Query:    1 MVSNLNPGSNVPKETPWGLSWEELFTSLRPSYEENMVMKSIASQVEDVLKNANLPHELIMGSSFGKKTMMKGETKLHIYSIQQDFQPENYFEAHLKPILQALKSEKRFAELKESGFAAVFHTNGIEVHLYAAGTLYGGPKDLLLPPKTVDKQSFQLIPEVARGYALARDVHVETSCSILRTQVIANQAPLYHDLVRVAKKWRSTSDFMSKADIPGDYLIELLMLEAFTGAPCMAHGPELYGIVFRRFLSLAATQCGSGSDIMADDSMPKSMLWWDRYFNRGVIDMCMAKGMLDVSRSNQCSIIVVDPAVPFINIARSVPDWTEMRRCARESLSSFQNNDLLDSLQDKVHALTEGMHEAINGMRAEIEMLQRLAVSPRRWSGVVQFNEVHMNSETWTKVMEVELHTIPWQVNARKTRTDGTGYATTVDISLQMMGKKKLEQSLDVDVLFRGGTSNLVFDSNVDHVLICKRSEIVRNRDYTMQITVIG 486
            MVSN     +   ET WGL WE++F +LRPS +E  + KSI SQVEDVLK+A+LPH L  G SFGKKT+  GE KL ++SI  DFQP+NYFE HLKP++ ALKS   F++LKE+G AAVF+ +GIEV + AAG LYGGPKDLLLP K  +KQS +++P++ RG  +AR+VHVET+C +LR+QVIANQ PLYHD+VR AKKWRST DF+S AD+PGDYLIELLMLEAFTGAPCM  GP LY    RRFLSLAA QCGSGSD+MADDSMPKSMLWWDRY+NRG ID+CMAKG+LDV RS+ CSIIVVDPAVPF+N+ARSVPDW+EMR+CAR+SLSSFQN DLLDSL  ++ AL+EGM + +NGMR +IE LQ L  SPRRWSG +QFNEVHMNS+ WTKVMEVEL T+ W++NARK RT+GTGY + VDISLQ +GKK LE+++DVDVLFRGGTSNLVFD++VDHVLIC+RSEIVRNRDY++Q+T++G
Sbjct:    1 MVSNTLQEHSASTETSWGLPWEDVFAALRPSPDEINLYKSIISQVEDVLKDAHLPHNLFPGGSFGKKTLTTGENKLQLFSIYDDFQPDNYFEVHLKPMMAALKSANVFSDLKENGLAAVFNKDGIEVRILAAGVLYGGPKDLLLPLKENEKQSGEVLPDILRGQQIAREVHVETTCGVLRSQVIANQCPLYHDMVRSAKKWRSTCDFISSADMPGDYLIELLMLEAFTGAPCMPRGPGLYSTTMRRFLSLAAAQCGSGSDVMADDSMPKSMLWWDRYYNRGTIDLCMAKGLLDVGRSDLCSIIVVDPAVPFVNVARSVPDWSEMRKCARDSLSSFQNTDLLDSLDHRLRALSEGMLDTVNGMRNQIEALQLLVNSPRRWSGAIQFNEVHMNSDAWTKVMEVELQTVKWRINARKARTEGTGYTSCVDISLQRIGKK-LERTIDVDVLFRGGTSNLVFDADVDHVLICRRSEIVRNRDYSIQVTIVG 485          
BLAST of Gvermi6906.t1 vs. uniprot
Match: R7QIV2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIV2_CHOCR)

HSP 1 Score: 489 bits (1260), Expect = 4.250e-167
Identity = 253/495 (51.11%), Postives = 337/495 (68.08%), Query Frame = 0
Query:    5 LNPGSNVPKETPWGLSWEELFTSLRPSYEENMVMKSIASQVEDVLKNANLPH-ELIMGSSFGKKTMMKGETKLHIYS-IQQDFQPENYFEAHLKPILQALKSEK--RFAELKESGFAAVFHTNGIEVHLYAAGTLYGGPKDLLLPPKTVDKQSFQL------IPEVARGYALARD---VHVETSCSILRTQVIANQAPLYHDLVRVAKKWRSTSDFMSKADIPGDYLIELLMLEAFTGAPCMAHGPELYGIVFRRFLSLAATQCGSGSDIMADDSMPKSMLWWDRYFNRGVIDMCMAKGMLDVSRSNQCSIIVVDPAVPFINIARSVPDWTEMRRCARESLSSFQNNDLLDSLQDKVHALTEGMHEAINGMRAEIEMLQRLAVSPRRWSGVVQFNEVHMNSETWTKVMEVELHTIPWQVNARKTRTDGTGYATTVDISLQMMGKKKLEQSLDVDVLFRGGTSNLVFDSNVDHVLICKRSEIVRNRDYTMQITVIG 486
            L   S+   ETPWG SW+ LFTSLRPS  +   + S+   ++D L+  N+ H  L  GS FGK T++ G+  L +Y+     F   +YFE+HL+P+L AL S K  RFA++ + G A  F   G+ V L+AAG L  GPK+LL     + +QS         +   ARG   A D   +HVETSC++LR   IA Q+PLY D+VRVAKKWR+TSDFM   + PGDYL+ELLMLEA+ GAP     P+ Y  +FRRFLSL ++Q G+GS+++ADD+MP+S L W   +N G ++  +A G+L    ++ CS++VVDPAVPF N+A +V DW E+R  AR SLS FQN++LL+ LQ K+++L+EGM E I GM+ +I  LQ L  SPRRWSG +QF EVHMN E WTKV EVEL T+ W+VNARK+RTDG GY+  VDISLQ +GK  L +++DVDV FR  TSNLVFD+N DHVLI  +SE++RNR+Y +QIT++ 
Sbjct:    2 LEKTSSASVETPWGQSWDSLFTSLRPSPSDLNTLSSLVDTIDDTLRAGNISHVSLHAGSGFGKGTLIAGDMSLDVYAQFGATFSATSYFESHLQPMLDALTSAKGIRFADINDRGLAIHFSFEGVSVRLFAAGALNSGPKELLAMQGGIGRQSSNTEKRSSGVGSNARGQFPAMDERGIHVETSCALLRVGFIAMQSPLYKDMVRVAKKWRATSDFMVSENRPGDYLLELLMLEAYLGAPVSPPTPDSYATIFRRFLSLVSSQSGTGSEVVADDAMPRSFLSWPVLYNHGAVEQSIALGLLKTGSADHCSLVVVDPAVPFANVATTVADWGEIRAVARNSLSHFQNSELLEQLQTKLNSLSEGMEEVIIGMQQKIAHLQSLEESPRRWSGNIQFKEVHMNGENWTKVTEVELRTVTWRVNARKSRTDGVGYSKMVDISLQRIGKP-LTRTIDVDVNFRSKTSNLVFDANNDHVLIVGKSEVLRNRNYPIQITIVA 495          
The following BLAST results are available for this feature:
BLAST of Gvermi6906.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IW81_9FLOR1.020e-25469.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIV2_CHOCR4.250e-16751.11Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1410.20coord: 160..345
e-value: 1.1E-17
score: 66.2
NoneNo IPR availablePANTHERPTHR11258:SF11SUBFAMILY NOT NAMEDcoord: 56..335
IPR0267742'-5'-oligoadenylate synthasePANTHERPTHR112582-5 OLIGOADENYLATE SYNTHETASEcoord: 56..335

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:407145..408605 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6906.t1Gvermi6906.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 407145..408605 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6906.t1 ID=Gvermi6906.t1|Name=Gvermi6906.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=487bp
MVSNLNPGSNVPKETPWGLSWEELFTSLRPSYEENMVMKSIASQVEDVLK
NANLPHELIMGSSFGKKTMMKGETKLHIYSIQQDFQPENYFEAHLKPILQ
ALKSEKRFAELKESGFAAVFHTNGIEVHLYAAGTLYGGPKDLLLPPKTVD
KQSFQLIPEVARGYALARDVHVETSCSILRTQVIANQAPLYHDLVRVAKK
WRSTSDFMSKADIPGDYLIELLMLEAFTGAPCMAHGPELYGIVFRRFLSL
AATQCGSGSDIMADDSMPKSMLWWDRYFNRGVIDMCMAKGMLDVSRSNQC
SIIVVDPAVPFINIARSVPDWTEMRRCARESLSSFQNNDLLDSLQDKVHA
LTEGMHEAINGMRAEIEMLQRLAVSPRRWSGVVQFNEVHMNSETWTKVME
VELHTIPWQVNARKTRTDGTGYATTVDISLQMMGKKKLEQSLDVDVLFRG
GTSNLVFDSNVDHVLICKRSEIVRNRDYTMQITVIG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0267742-5A_synthase