Gvermi7015.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7015.t1
Unique NameGvermi7015.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length129
Homology
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BLAST of Gvermi7015.t1 vs. uniprot
Match: A0A2V3J4G5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4G5_9FLOR)

HSP 1 Score: 167 bits (422), Expect = 4.670e-51
Identity = 91/129 (70.54%), Postives = 107/129 (82.95%), Query Frame = 0 
Query:    1 MLAVSSA-LARAAALTAPKRGLAIVATVKQASDTSATQFPAPSHVSLASEAADIAHQIHAFYSNPDSVISLPEQTREALQAEVMKRVLAVPDAEISDAWAQQNLQVPAEIRLGDNPLFESAQHSRSSSK 128
            MLA+ +A LARAA   AP R LAI ATVK ASDTSA +FPAPSHVS+A+EAAD+A Q++ FYSNPDSVI++P+  RE+L+AEVMK+V AVPDA IS AWA QNLQ+P+EIRLGDNPLFES Q  R SSK
Sbjct:    1 MLALRAASLARAATSAAPIRALAITATVKDASDTSAMKFPAPSHVSIAAEAADLARQLNEFYSNPDSVIAIPDDIRESLRAEVMKKVGAVPDANISAAWANQNLQIPSEIRLGDNPLFESHQKLRDSSK 129
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BLAST of Gvermi7015.t1 vs. uniprot
Match: R7QGD0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGD0_CHOCR)

HSP 1 Score: 131 bits (329), Expect = 6.340e-37
Identity = 65/127 (51.18%), Postives = 96/127 (75.59%), Query Frame = 0 
Query:    1 MLAVSSALARAAALTAPKRGLAIVATVKQASDTSATQFPAPSHVSLASEAADIAHQIHAFYSNPDSVISLPEQTREALQAEVMKRVLAVPDAEISDAWAQQNLQVPAEIRLGDNPLFESAQHSRSSS 127
            +L  SS+L RAAA   P+R LAI +TV QA+DTS   FPAPSHVSL+S+AA++A Q+  FYS+PDSVI +PE+TR+ + A++ KR+ ++PD  +++ W   ++ VP+E+RLGDNP FE+ + +R +S
Sbjct:    3 LLRASSSLRRAAAAV-PRRHLAIASTVGQATDTSKMDFPAPSHVSLSSQAAELASQLTNFYSDPDSVIKIPEETRKVIHADISKRIRSIPDTPLTEDWTDAHITVPSEVRLGDNPYFEAFKKAREAS 128
The following BLAST results are available for this feature:
BLAST of Gvermi7015.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4G5_9FLOR4.670e-5170.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGD0_CHOCR6.340e-3751.18Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..128
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:956206..956732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7015.t1Gvermi7015.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 956206..956732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7015.t1 ID=Gvermi7015.t1|Name=Gvermi7015.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=129bp
MLAVSSALARAAALTAPKRGLAIVATVKQASDTSATQFPAPSHVSLASEA
ADIAHQIHAFYSNPDSVISLPEQTREALQAEVMKRVLAVPDAEISDAWAQ
QNLQVPAEIRLGDNPLFESAQHSRSSSK*
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