Gvermi7038.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7038.t1
Unique NameGvermi7038.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length269
Homology
BLAST of Gvermi7038.t1 vs. uniprot
Match: A0A2V3IJ70_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ70_9FLOR)

HSP 1 Score: 350 bits (898), Expect = 4.350e-119
Identity = 181/263 (68.82%), Postives = 208/263 (79.09%), Query Frame = 0
Query:    1 MDPARVTNARATQAYIVAAFLGAVGAALFVSLLDTLRVSSLAEGFSGIANSPWALSALADYIVGACFAALYVYLRDGSSVFCLSNKLFAVVFPFVGNFALLWYVAFLIFRARDVTLGLLPYTTEGSSG-PLNMRSEGSAKQSKVIGSVFFGLLLGFAAVCFWASKLESLREGYVILRTVKWAGFLFIDNLTGLLFTVMFVIVREGELNCITTLWIISFTLFGNAPTCLYVIHMAQLALTRDVPFSMVLLSRKKQLSVHSALVD 262
            M+     NARATQAYI AAFL  VG ALF+SL+ T+R S L+EG SGI  SPWALSALADY VGACFAALYV+LRDG  VFCLSNK+FAVVFPFVGNFALLWYVA+LI +A+DVT GLLP T E      ++MRS  + K  K IG  FF LLL FAAVCFWAS+ +SL+EGY +L+ VKWAGF FIDNLTG+LFTV+F+IVREGE+NCIT+LWI+    FGN PTCLYVIH+AQ A +RDV FS VLLSR K +SVHS L D
Sbjct:    1 MESTTAANARATQAYIFAAFLTTVGVALFMSLVQTIRKSPLSEGISGIGESPWALSALADYFVGACFAALYVFLRDGPPVFCLSNKVFAVVFPFVGNFALLWYVAYLIVKAKDVTRGLLPQTVETPGNVEIDMRSSSTQKHPKTIGVAFFALLLWFAAVCFWASQRQSLQEGYRVLKMVKWAGFTFIDNLTGILFTVVFIIVREGEVNCITSLWILGLVFFGNGPTCLYVIHVAQQAFSRDVSFSRVLLSRSKSVSVHSVLED 263          
BLAST of Gvermi7038.t1 vs. uniprot
Match: A0A2V3J599_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J599_9FLOR)

HSP 1 Score: 153 bits (387), Expect = 7.460e-42
Identity = 89/257 (34.63%), Postives = 144/257 (56.03%), Query Frame = 0
Query:    1 MDPARVTNARATQAYIVAAFLGAVGAALFVSLLDTLRVSSLAEGFSGIANSPWALSALADYIVGACFAALYVYLRDGSSVFCLSNKLFAVVFPFVGNFALLWYVAFLIFRARDVTLGLLPYTTEGSSGPLNMRSEGSAKQSKVIGSVFFGLLLGFAAVCFWASKLESLREGYVILRTV--KWAGFLFIDNLTGLLFTVMFVIVREGELNCITTLWIISFTLFGNAPTCLYVIHMAQLALTRDVPFSMVLLSRKKQLS 255
            MD    T+    + Y +AA L     A+  +       +SL      I+ S WA+    D   GA FA  Y+++R+G SV C+  KLFA ++PF+ NFALLWYVA++I   +D+   L+PY+T  ++G + MR++ + + ++++ S+   L      +   A + ES    +  L +   KW  F + D+L GLLFT +++I REG  +  + LW ++  + GNA TC+YV  MA  A++ DVP + VLLS +K ++
Sbjct:    1 MDSTTATSPSLIKTYSIAALLFIASFAVLFAYTSAALETSLLNAPQDISQSGWAVVIFFDASFGAVFAVYYLFVRNGPSVACIPAKLFAFLWPFISNFALLWYVAYMILLHKDLRSALIPYSTAEANGQVPMRTQRNRRTAQIVASIASFLFFVIVVLDINAMRYESFSTAWTKLLSNQNKWITFTYADSLAGLLFTAIYIIEREGGPSPTSVLWAVALLVLGNAVTCVYVFLMALQAISEDVPITHVLLSSRKTIA 257          
The following BLAST results are available for this feature:
BLAST of Gvermi7038.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IJ70_9FLOR4.350e-11968.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J599_9FLOR7.460e-4234.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 212..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 231..268
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 110..142
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..200
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 163..182
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 201..211
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..85
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 209..231
NoneNo IPR availableTMHMMTMhelixcoord: 177..199
NoneNo IPR availableTMHMMTMhelixcoord: 87..109
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 13..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1110859..1111665 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7038.t1Gvermi7038.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1110859..1111665 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7038.t1 ID=Gvermi7038.t1|Name=Gvermi7038.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=269bp
MDPARVTNARATQAYIVAAFLGAVGAALFVSLLDTLRVSSLAEGFSGIAN
SPWALSALADYIVGACFAALYVYLRDGSSVFCLSNKLFAVVFPFVGNFAL
LWYVAFLIFRARDVTLGLLPYTTEGSSGPLNMRSEGSAKQSKVIGSVFFG
LLLGFAAVCFWASKLESLREGYVILRTVKWAGFLFIDNLTGLLFTVMFVI
VREGELNCITTLWIISFTLFGNAPTCLYVIHMAQLALTRDVPFSMVLLSR
KKQLSVHSALVDDIDQVV*
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