Gvermi5222.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5222.t1
Unique NameGvermi5222.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length225
Homology
BLAST of Gvermi5222.t1 vs. uniprot
Match: A0A2V3IER7_9FLOR (EamA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IER7_9FLOR)

HSP 1 Score: 249 bits (636), Expect = 2.170e-78
Identity = 139/220 (63.18%), Postives = 175/220 (79.55%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYVFGMEKRLAPAVVLASVVSVLGVALLTLDNVSASFSLLGDGVMLLTAFLSTAFILRTKVHTKVAEAGPLVPAKVLAQTTFASLYLLASSLRLRAAPTSFGAL--FAGATPMLLLANVAMVLWGGIFVSWMSTVLQVKGQKLVAASETVIIFTSMPLWASVWAWPLGERFGAHGLVGASLILGATAIAAASASKKQ 221
            L+HTTA+RGAFL+QMSTIIVPIAA++ GME R+  AV+LA VVSV GVALLTLDNVS++FS LGDG+MLL AF++T +ILR+K H+  A AGPLVPAKV+ QT FA LY   S L +  +    GA+  F GATP+L+ ANV +VLW G+ + W+STVLQ++GQ LV+ASE VIIFTS PLWA++ AWPLGERFG  G++GA+LILGATA+A  + S K+
Sbjct:  170 LKHTTAARGAFLSQMSTIIVPIAAFLCGMEARIPRAVLLACVVSVFGVALLTLDNVSSTFSWLGDGMMLLVAFMATVYILRSKQHSSKAHAGPLVPAKVIGQTFFALLYFSLSLLMMPGSVRGVGAVTWFTGATPILVAANVMLVLWAGVCICWLSTVLQMRGQSLVSASEAVIIFTSTPLWAALMAWPLGERFGPRGIIGAALILGATAVAGRAGSDKK 389          
BLAST of Gvermi5222.t1 vs. uniprot
Match: A0A2V3J448_9FLOR (Putative transporter n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J448_9FLOR)

HSP 1 Score: 107 bits (267), Expect = 8.970e-24
Identity = 84/223 (37.67%), Postives = 126/223 (56.50%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYVFGMEKRLAPAVVLASVVSVLGVALLTLDNVSASFSL-----LGDGVMLLTAFLSTAFILRTKVHTK-VAEAGPLVPAKVLAQTTFASLYLLASSLRLRAAPTSFGALFAGA-------TPMLLLANVAMVLWGGIFVSWMSTVLQVKGQKLVAASETVIIFTSMPLWASVWAW-PLGERFGAHGLVGASLILGATAI 212
            LR+T ASR AFL QMST++VP+AA    +EK L P V + +  ++ GV LLTL    A+ +      LGD + +L+A + T ++LRT  H +   ++  LV  KV +Q   + ++L A +     +  S  A  + A       TP  +  N+ +VLW G+ VS  ++ LQ KGQ+ V ASE  ++F + PLWASV A   LGER  + G+ GA++I+    I
Sbjct:  168 LRYTDASRAAFLQQMSTVLVPLAAAALRIEK-LTPQVTMGAACALAGVGLLTLTAAPAAAAAATLRPLGDLLEVLSAVILTVYMLRTSYHARNTKKSSALVAIKVCSQAALSFIWLGAQTAFQSGSTVSAAAATSVAAAAPVLWTPTAVFLNLMIVLWAGVLVSAAASWLQTKGQQAVPASEAAVLFAAQPLWASVVATLMLGERLTSLGMAGAAMIVSGAVI 389          
BLAST of Gvermi5222.t1 vs. uniprot
Match: R7QC72_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC72_CHOCR)

HSP 1 Score: 105 bits (261), Expect = 1.090e-22
Identity = 83/208 (39.90%), Postives = 120/208 (57.69%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYVFGMEKRLAPAVVLASVVSVLGVALLTLDNVSASFS-LLGDGVMLLTAFLSTAFILRTKVHTKVAEAGPLVPAKVLAQTTFASLYLLASSLRL--RAAPT--SFGALFAGATPMLLLANVAMVLWGGIFVSWMSTVLQVKGQKLVAASETVIIFTSMPLWAS-VWAWPLGERFGAHGLVGASL 205
            L+ T+ASR AFL Q+ T+IVP+ A VFG++K + P   L+S+++V GVALL+ D    + S   GD + +L+AF  + +I+R   +     A PLV  K+  Q   +  + L++ + +     P   S G   A  T   +L N  +V+W G+F S +S   Q KGQ+ V ASE V+IF + PLWAS V A  LGE FGA G  G +L
Sbjct:  229 LQQTSASRAAFLVQLQTVIVPVLAGVFGLDK-ITPKTWLSSLIAVGGVALLSSDKGHGTVSSFTGDALEVLSAFFFSTYIIRLSKYCNEIPANPLVAMKIAVQAVLSIGWALSAEIGILFNHGPNDLSKGDEVAAWTLGAVLVNAGVVVWTGLFSSALSGWAQTKGQQGVPASEAVVIFATQPLWASGVAAIILGESFGAKGFAGGAL 435          
BLAST of Gvermi5222.t1 vs. uniprot
Match: A0A7S0ZJN1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJN1_9RHOD)

HSP 1 Score: 88.2 bits (217), Expect = 1.220e-16
Identity = 75/220 (34.09%), Postives = 117/220 (53.18%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYVFGMEKRLAPAVVLASVVSVLGVALLTLDNVSASFS-LLGDGVMLLTAFLSTAFILRTKVHTKVAEAGPLVPAKVLAQTTFASLYLLASSLRLRAAPTSFGALFAGATPMLLLANVAMVLWGGIFVSWMSTVLQVKGQKLVAASETVIIFTSMPLWASVWAWP-LGERFGAHGLVGASLILGATAIAAASASKKQ 221
            L  T+A R AFLNQ+ T++VP+     G EK +       SV+++ GVALL+ D+   + S   GD   + +A   + +++R        +   LV  K+  Q   +  + + ++       ++F       +   L+A + ++LW GIF S +S V+Q  GQK   ASET +I ++ PLWAS  A   L ERFG  G++G +LIL ATA++A    KKQ
Sbjct:  261 LETTSAGRAAFLNQLQTVMVPLICVALGQEK-ITKLTAACSVLAITGVALLSGDSSPTTVSSTAGDAWQIASALFFSLYVIRVGTLAGRYKTPFLVGMKIFVQMILSVGWGVVANWDRLQHLSNFE---YNLSQHELIATIGVILWTGIFCSAVSAVVQTTGQKGTPASETALILSTQPLWASALAAIFLSERFGPKGILGGALILSATALSARFKEKKQ 476          
BLAST of Gvermi5222.t1 vs. uniprot
Match: A0A7S1T8V9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T8V9_9RHOD)

HSP 1 Score: 87.8 bits (216), Expect = 1.320e-16
Identity = 71/213 (33.33%), Postives = 112/213 (52.58%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYVFGMEKRLAPAVVLASVVSVLGVALLTLDNVSASFSLLGDGVMLLTAFLSTAFILRTKVHTKVAEAGPLVPAKVLAQTTFASLYLLASSLRLRAAPTSFGALFAGATPMLLLANVAMV---LWGGIFVSWMSTVLQVKGQKLVAASETVIIFTSMPLWASVWAWPL-GERFGAHGLVGASLILGATAI 212
            L+ T ASR AFLNQM T+IVP+   + G+E+        A + +V+GVA+L+      S+S++GD   L++A   + ++LR   +    +   LV AKV+ Q T +  ++L +  +            +   P  +   V +V   +W G+  S +S +LQ   Q+ + ASET +I +S PLWAS +A  L GE     G++G   IL AT I
Sbjct:  197 LKATQASRAAFLNQMQTVIVPVLGAILGIERVTMSGWASAGL-AVIGVAILSSAGEPGSYSVVGDTFELVSALFFSVYVLRVGKYAATCDPRNLVGAKVVIQATLSVGWILWNITQNGTVNHPVEFFESADNPWSVYEAVVIVGTIVWNGLMTSALSGLLQTTAQRYIKASETALILSSQPLWASAFAAGLLGEHLSFRGIIGGLAILLATVI 408          
BLAST of Gvermi5222.t1 vs. uniprot
Match: A0A7S2ZDY3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDY3_9RHOD)

HSP 1 Score: 87.0 bits (214), Expect = 2.520e-16
Identity = 76/222 (34.23%), Postives = 115/222 (51.80%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYVFGMEKRLAPAVVLASVVSVLGVALLTLDN-VSASFSLLGDGVMLLTAFLSTAFILRTKVHTKVAEAGPLVPAKVLAQTTFASLYLLASSLRLRAAPTSF--GALFAGATPMLLLANVAMVLWGGIFVSWMSTVLQVKGQKLVAASETVIIFTSMPLWASVWAWPL-GERFGAHGLVGASLILGATAIAAASASKKQ 221
            L+   A R AFLNQM T+IVPIA    G+EK+L+   + +S ++V GVA+L  DN      SL GD + L +A   + +ILR   ++K  +   LV  KV+ Q   A ++   S   L+     +  G L        LLA  A++ W G+  S +S  LQ   QK+V  S+  +IF S PL A+  +W L GE       +G   I+GA   ++A ++ ++
Sbjct:  197 LQSVGAGRAAFLNQMQTVIVPIAGLALGIEKKLSFRTLASSFIAVFGVAILAADNNPEVVSSLKGDILELTSALFFSLYILRLTSYSKRTKLPRLVGGKVIVQAALAWVWTFQSFATLQTTIHFYPDGGLHD------LLAWAAVIAWTGLMSSALSGWLQTAAQKVVRPSDAAVIFASQPLVAAALSWILLGENLDLQAGIGGLFIVGAAVWSSAGSASEE 412          
BLAST of Gvermi5222.t1 vs. uniprot
Match: R1DXE7_EMIHU (EamA domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DXE7_EMIHU)

HSP 1 Score: 75.1 bits (183), Expect = 3.250e-12
Identity = 71/209 (33.97%), Postives = 107/209 (51.20%), Query Frame = 0
Query:    7 TTASRGAFLNQMSTIIVPIAAYVFGMEKRLAPAVVLASVVSVLGVALLTLDNVSASFSLLGDGVMLLTAFLSTAFILRTKVHTKVAEAGPLVPAKVLAQTTFASLYLLASSLRLRAAPTSFGALFAGATPMLLLANVAMVLWGGIFVSWMSTVLQVKGQKLVAASETVIIFTSMPLWASVWAWP-LGERFGAHGLVGASLILGATAIAA 214
            T+A  GAFL Q++T++VP+A    G+   + P +  A   +++G+A+ T D   A+ SL GD   +  A     + LR  V  K      L+  KV AQ   A+L + A  L   A    F       TP  L+A   +VLW GI V+ ++  LQV GQ+ V  +   +++ S PLWA++ +   LGE  G  GL+G +  L A  +AA
Sbjct:  163 TSADHGAFLIQLTTLLVPVAQAFQGVP--IPPRIWAAVGTALVGLAIFTADPSDAAASLSGDASCVAAALCYALYDLRLFVWGKRVTPLRLIQNKVAAQ---AALAVTAVPLLAYADARQF---VESVTPSDLVALAPLVLWSGIVVNGVAPFLQVGGQQAVGPARAQVVYASGPLWAALLSLAVLGETIGPQGLLGGAAFLAAVLLAA 363          
BLAST of Gvermi5222.t1 vs. uniprot
Match: A0A7S3W097_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W097_EMIHU)

HSP 1 Score: 71.2 bits (173), Expect = 1.250e-11
Identity = 67/197 (34.01%), Postives = 101/197 (51.27%), Query Frame = 0
Query:    7 TTASRGAFLNQMSTIIVPIAAYVFGMEKRLAPAVVLASVVSVLGVALLTLDNVSASFSLLGDGVMLLTAFLSTAFILRTKVHTKVAEAGPLVPAKVLAQTTFASLYLLASSLRLRAAPTSFGALFAGATPMLLLANVAMVLWGGIFVSWMSTVLQVKGQKLVAASETVIIFTSMPLWASVWAWP-LGERFGAHGLVG 202
            T+A  GAFL Q++T++VP+A    G+   + P +  A   +++G+A+ T D   A+ SL GD   +  A     + LR  V  K      L+  KV AQ   A+L + A  L   A    F       TP  L+A   +VLW GI V+ ++  LQV GQ+ V  +   +++ S PLWA++ +   LGE  G  GL+G
Sbjct:   12 TSADHGAFLIQLTTLLVPVAQAFQGVP--IPPRIWAAVGTALVGLAIFTADPSDAAASLTGDASCVAAALCYALYDLRLFVWGKRVTPLRLIQNKVAAQ---AALAVTAVPLLAYADARQF---VESVTPSDLVALAPLVLWSGIVVNGVAPFLQVGGQQAVGPARAQVVYASGPLWAALLSLAVLGETIGPQGLLG 200          
BLAST of Gvermi5222.t1 vs. uniprot
Match: A0A8J2WI97_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WI97_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.820e-11
Identity = 66/211 (31.28%), Postives = 106/211 (50.24%), Query Frame = 0
Query:    7 TTASRGAFLNQMSTIIVPIAAYVFGMEKRLAPAVVLASVVSVLGVALLTLDNVSASF--SLLGDGVMLLTAFLSTAFILRTKVHTKVAEAGPLVPAKVLAQTTFASLYLLASSLRLRAAPTSFGALFAGATPMLLLANVAMVLWGGIFVSWMSTVLQVKGQKLVAASETVIIFTSMPLWASVWAWP-LGERFGAHGLVGASLILGATAIAA 214
            T++  GAFL Q++T+IVP+     G+   + P +  A V+++ GV + TLD  +A+   S  GD + +L A     + LR   H        L+  K+ AQ   A L +LA+     +      A      P+      A  +W G+FV+  ++VLQV GQ+ V  +   +++ S PLWA++ +   LGE  G  G VG +L + A  +AA
Sbjct:  161 TSSDHGAFLIQLTTLIVPLVQGARGVP--IPPRIWAAVVLALTGVFVFTLDPAAAATAASQQGDALCVLAAIFYATYDLRLFEHGSRVAPLTLITTKITAQ---AGLSVLAAVAAWSSVGPQLDAFDGDLWPV-----AAAAIWSGVFVNAFASVLQVSGQQAVGPARAQVVYASQPLWAAILSLIFLGETVGVEGCVGGALFIAACFLAA 361          
BLAST of Gvermi5222.t1 vs. uniprot
Match: A0A6U6LLQ7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6LLQ7_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 4.750e-11
Identity = 71/223 (31.84%), Postives = 113/223 (50.67%), Query Frame = 0
Query:    7 TTASRGAFLNQMSTIIVPIAAYVFGME--KRLAPAVVLASVVSVLGVALLTLDNVSASFS----------LLGDGVMLLTAFLSTAFILRTKVHTKVAEAGPLVPAKVLAQTTFASLYLLASSLRLRAAPTSF--GALFAGATPMLLLANVAMVLWGGIFVSWMSTVLQVKGQKLVAASETVIIFTSMPLWASVWAWP-LGERFGAHGLVGASLILGATAIAA 214
            TTA  GAFL Q++T+IVP+   + G+   +R+  ++VLA    + GV L T D  +A  +          +LGD + ++ A     + LR     ++     L+  K+  Q   +++ L A     R    SF     F+ A P+     +A+VLW G+ V+ ++  LQV GQ+ V  +    ++ S PLWA+  ++  LGE  GA GLVG +  LGA  +AA
Sbjct:  250 TTADHGAFLIQLTTLIVPVVQGIMGVPIPRRIVTSIVLA----LAGVFLFTQDPSAACSAGNVADNSNAVVLGDALCVVAAGFYATYDLRLFKWGQLVAPRELITRKIATQAALSAVLLAAIG---RDDTVSFLSNLDFSTAGPL-----IAVVLWAGVMVNAIAPFLQVGGQQAVGPTRAQTLYASQPLWAATLSYFFLGETVGAQGLVGGAAFLGALFLAA 460          
The following BLAST results are available for this feature:
BLAST of Gvermi5222.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IER7_9FLOR2.170e-7863.18EamA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3J448_9FLOR8.970e-2437.67Putative transporter n=1 Tax=Gracilariopsis chorda... [more]
R7QC72_CHOCR1.090e-2239.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZJN1_9RHOD1.220e-1634.09Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1T8V9_9RHOD1.320e-1633.33Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2ZDY3_9RHOD2.520e-1634.23Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
R1DXE7_EMIHU3.250e-1233.97EamA domain-containing protein n=2 Tax=Emiliania h... [more]
A0A7S3W097_EMIHU1.250e-1134.01Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A8J2WI97_9STRA3.820e-1131.28Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6U6LLQ7_9STRA4.750e-1131.84Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR42920OS03G0707200 PROTEIN-RELATEDcoord: 3..220
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 190..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..215
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 57..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 116..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 216..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..189
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..155
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 130..215
NoneNo IPR availableTMHMMTMhelixcoord: 133..155
NoneNo IPR availableTMHMMTMhelixcoord: 36..54
NoneNo IPR availableTMHMMTMhelixcoord: 195..217
NoneNo IPR availableTMHMMTMhelixcoord: 13..32
NoneNo IPR availableTMHMMTMhelixcoord: 61..83
NoneNo IPR availableTMHMMTMhelixcoord: 168..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:703445..704119 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5222.t1Gvermi5222.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 703445..704119 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5222.t1 ID=Gvermi5222.t1|Name=Gvermi5222.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=225bp
MNALRHTTASRGAFLNQMSTIIVPIAAYVFGMEKRLAPAVVLASVVSVLG
VALLTLDNVSASFSLLGDGVMLLTAFLSTAFILRTKVHTKVAEAGPLVPA
KVLAQTTFASLYLLASSLRLRAAPTSFGALFAGATPMLLLANVAMVLWGG
IFVSWMSTVLQVKGQKLVAASETVIIFTSMPLWASVWAWPLGERFGAHGL
VGASLILGATAIAAASASKKQASR*
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