Gvermi5183.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5183.t1
Unique NameGvermi5183.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length959
Homology
BLAST of Gvermi5183.t1 vs. uniprot
Match: A0A2V3J6U8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U8_9FLOR)

HSP 1 Score: 1191 bits (3082), Expect = 0.000e+0
Identity = 603/945 (63.81%), Postives = 728/945 (77.04%), Query Frame = 0
Query:   11 VTLENIQNALAILHRGDQRVSEADRYLDQARASPQLWHVLPALLSSPSQPQLLFAAHALYSRIHADWLAMDEASRSAAVSLAVDALLSPSLAQQSQATRSSAVYYLGKALGGAISRSPQAFQESMWEMLVMKLRDKPALKCDVMAAIAAEMDHNATSHVANHVLIRAFCRSRAHQVVPDAVFLLISCPQSGPISEERTQQLKAAVQCLQAWTPYADKMQIANALLHVIVVPQLAHSATEALNEVVGYSGTSHSLLLSTTKGLMAAFHGASGPDAHVIHHAISEVVCSLSEWNADELMEQQTEQSGEIIRIAIDLLWTCLNAPDKSSFFAAIEGWMAWISADHLIQEDQARIGPERICAVLSVVIQRMGSLCFIRGYLNPELDDCESEEEKGPVLELLATGALSIGHNKYLALVSKFLPTDDNMPPNQICAALEAMGASKDSTEDASISEEEWNESKQVLERVLRLADARTVNSLANGGVQHWQTALQRSALRALASHSLLIARDEKLFYTTAACAVNVLRKTELADWGAALLQSLSEIQPRSLLPFLRDLITALNQSVSGMSTCAAEQATDAVASVASLLPLRQERVTALEEMVRKPCERLCVAAARGIDASLNEPVLCRDLALLCTAMRVYNDHEAVVFVFQRIKEAVFHLARGLCGNGTISKAICSLLEVNALPTLFDEDDEASGDRVYSRDEKSRLNLIVSITKLLGECFENSGPDGEDVWLKTMNKLIPDLVTGVEDAPGSCEGEALVCITECVKCAVVGLNKFSADNYETQPEMTRMFFKLVTTLTKRASSALIPAAADISRIAMRTLYCSNVGNVKASLNFWKALFSRTVQAPLQQIVLNIANGPNGVSVGVLCAARNSRCTSDVADVLFAMCRIISGEMDENQFLRDCLTAAFGVAGVPKEGLDRNVREMLFRDCYVSVGSKKEFRRALDEVGRMCNM 955
            +T ENI  AL +L  GD R+  AD YL QARASPQ+W VLPALL+S SQ  LLF A ALY+RI +DWLA+D+  RS+AVSLAV+ALLS SLAQQ+QA  SS V+YLGKALG A+S SPQ FQE +WEMLV+KL+ + ALKCDVMAAIA E+DHNATSHVANHV IRAFCRSRAHQVVPDA++LL S   +  +SEE  +QL+ AVQCLQ+WTPYADK Q+A+ALL VI +PQLA S TEALNE+VGYSGTS  LLL T +GL AAFH A GPD H++HHAISEVVCSLSEWNADELMEQQT+QS  +I   I+LLW CLN PDK+SFFAAIEGWMAW++ADHL+Q DQ R+G +R+ AVLSVVIQRM SL F+R    PELD+ + ++EKGPV++LL  G+LSIGH KY+ L SKFL    + PP QICA LEA+ AS            +W   ++VLE V+RL ++    S+ NG    WQT L+ S L+ALAS++LL+ +D+KLFY +A CAV  L++ ELA  GA LL++L E+ P  L+ FL+DLI  LN SV+ MS  AAE+AT AVAS+A  L  R ERV+ALEE+VRK CERLCVAA    D  LNE  LCRDL LL TA+RVYND EA V VFQRI++AVF L R  C NG ISKAIC+LLEVNA PTL DEDDE S + V + DEK RL   VS+ KL+ ECF+ SGPDGE+ WLKTMNKL+PDLVTG+ED  G  +G+AL C+ ECV+CAVVGL  FS++N++TQPEMTR+ FKLVTTLT RAS  ++P A++IS  AMR +  S VG+VKA L+FWKALFSR   A LQQ VLN+  GPN ++ G LCAAR +RC SD ADVLFAMCRII+G++DE Q LR+CL +AFG+  VPKEGL+R+VREMLFR CY SVG+KKEFR+ALD+VGR+C M
Sbjct:   10 ITTENIHKALLVLQHGDHRLLHADHYLAQARASPQVWQVLPALLASTSQTSLLFGAQALYTRIRSDWLALDDNIRSSAVSLAVEALLSHSLAQQTQANCSSVVHYLGKALGCAVSMSPQQFQEPLWEMLVLKLQGRRALKCDVMAAIATELDHNATSHVANHVQIRAFCRSRAHQVVPDAIYLLNSVRNNETVSEECIKQLRVAVQCLQSWTPYADKAQVADALLKVIGIPQLAGSVTEALNEIVGYSGTSLPLLLCTARGLTAAFHAARGPDMHIVHHAISEVVCSLSEWNADELMEQQTDQSRVVIHTVIELLWICLNVPDKASFFAAIEGWMAWVAADHLMQADQPRLGVDRVSAVLSVVIQRMESLSFVRACFEPELDEEDGDDEKGPVVDLLCVGSLSIGHYKYILLTSKFLSEASSRPPGQICATLEALAASTXXXXXXXXXXHDWKGVREVLETVIRLVESGAAGSIQNGDGHPWQTVLRSSGLKALASYTLLLVKDDKLFYRSAVCAVRALQQPELARQGACLLRNLGEVGPNFLVQFLQDLIMVLNHSVTKMSVSAAEEATYAVASIACKLETRGERVSALEELVRKACERLCVAARGKDDLVLNEASLCRDLILLSTAVRVYNDQEAAVCVFQRIRDAVFQLCRRHCANGVISKAICTLLEVNASPTLLDEDDEVSDECVSAHDEKCRLAFTVSVLKLVAECFKRSGPDGENAWLKTMNKLVPDLVTGMEDNMGVFDGDALDCVRECVQCAVVGLKNFSSENFDTQPEMTRLVFKLVTTLTTRASGTVLPLASEISHTAMRIIQSSEVGSVKAGLSFWKALFSRRAGAMLQQTVLNVTGGPNAIAAGALCAARYTRCASDAADVLFAMCRIIAGQLDEKQMLRECLRSAFGMENVPKEGLERSVREMLFRGCYSSVGNKKEFRKALDKVGRVCGM 954          
BLAST of Gvermi5183.t1 vs. uniprot
Match: R7QDU7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDU7_CHOCR)

HSP 1 Score: 499 bits (1285), Expect = 1.120e-158
Identity = 314/919 (34.17%), Postives = 502/919 (54.62%), Query Frame = 0
Query:   63 LFAAHALYSRIHADWLAM-DEASRSAAVSLAVDALLSPSLAQQSQATRSSAVYYLGKALGGAISRSPQA-FQESMWEMLVMKLRDKPALKCDVMAAIAAEMDHNATSHVANHVLIRAFCRSRAHQVVPDAVFLLISCPQSGPISEERTQQ---LKAAVQCLQAWTPYADKMQIANALLHVIVVPQLAHSATEALNEVVGYSGTSHSLLLSTTKGLMAAFH---GASGPDAHVIHHAISEVVCSLSEWNADELMEQQTEQSGEIIRIAIDLLWTCLNAPDKSSFFAAIEGWMAWISADHLIQEDQARIGPERICAVLSVVIQRMGSLCFIRGYLNPELDDC-ESEEEKGPVLELLATGALSIGHNKYLALVSKFLPTDDNMPPNQICAALEAMGASKDSTEDASISEEEWNESKQVLERVLRLADARTVNSLANGGVQHWQTALQRSALRALASHSLLIARD--EKLFYTTAACAVNVLRKTELADWGAALLQSLSEIQPRSLLPFLRDLITALNQSVSGMSTCAAEQATDAVASVASLLPLRQERVTALEEMVRKPCERLCVAAARGIDASLNEPVLCRDLALLCTAMRVYNDHEAVVFVFQRIKEAVFHLARGLCGNGTISKAICSLLEVNALPTLFDEDDEASGDRVYSRDEKS---------RLNLIVSITKLLGECFENSGPDGEDVWLKTMNKLIPDLVTGVEDAPGS-CEGEALVCITECVKCAVVGLNKFSADNYETQPEMTRMFFKLVTTLTKRASSA--LIPAAADISRIAMRTLYCSNVGNVKASLNFWKALFSRTVQAPLQQIVLNIANGPNGVSVGVLCAARNSRCTSDVADVLFAMCRII---SGEMDENQFLRDCLTAAFGVAGVPKEGLDRNVREMLFRDCYVSVGSKKEFRRALDEVGRMCNM 955
            +FAA+ +++R  ADWL   +EA    A  L ++ L        + A  +S V++ GK  G  +S +     ++ MW  L+ +L     LKC+ +AA   E+DH + SHV  + ++RAFC+S+AH+V+   V +L S   + P+S  +      L+AAV CL AW  YAD+  IA+ LL  I VPQLA  A+E L E+VGYSG++  LL+ T  GL++ F    G SG     +HHAI+EVV SLS+ NADEL+EQ    S  I+  A  LL  CL   D +SFFA+++GW +WI+A +L++++QAR+  ER+  V+ +V+QR+ SL F+          C E+ +E   V +LL      IG   Y+ ++  F  TD N+    +CAAL ++  + +  E     +E+ +    +L R+L L +  + NS   G   +   +++  AL A+ S + L++    E  F     CA   +   ++ +  +  L  L++  P  L  FL DL+++  +++S MS  AA      +A V S L  R ER  AL  ++ +PC+ L ++     + S  E  +CR L L+   ++  ND+E  + V+ R++  +F +A   CGN T+S+AIC +LEV  LPTL D++        ++ D +          R  L +S   L  ECF  SG DGE VWL  + ++ P +V  ++   G+  EG AL C+   ++ ++ GL  F+  NY+++ +M   +F+  T L    SS   +I  ++  +   ++ L C+ +  V+ +L +WK++F    Q  + + +L  A G + ++   +CAAR++RC   VAD LFA+C+ +   SG +D +  LR CLTAAF   GV   GLD  VRE L+R C  + GS ++FR+AL E GR+ ++
Sbjct:    1 MFAANTIHARTRADWLTFANEAHFLTAFHLVLEGLERAKHISSAGAAATSPVHFFGKTSGFCLSMAHTPNLRDVMWASLISQLGSDHVLKCNALAAAVQEIDHTSDSHVETYAVMRAFCQSKAHEVLTSPVAVLASL-DAAPLSPHKPMSIPDLRAAVLCLHAWQRYADRNAIASVLLKAIRVPQLADDASETLAEMVGYSGSNMQLLMGTCDGLLSTFQHVRGCSGQST--VHHAIAEVVSSLSDGNADELLEQVNTNSVLIVEKATQLLTLCLELRDDASFFASVQGWTSWITAANLVEQNQARLVLERVAHVVRLVVQRITSLQFMADLTESHGRGCPETNDELVCVRDLLLESTKCIGIGGYVEVIKPFFETDWNVSTRSLCAALFSVAVAGEIDESVGSQKEDRHVVLGLLGRILDLIETISANSREAG---NGYASVKIFALSAMCSFAELLSDQGSEAEFRRALHCAGTGILDPQVNEKSSEFLYELADAHPERLRMFLTDLLSSGTRALSQMSDKAALNCVRGLAKVTSALETRGERQKALNIILEEPCKYL-LSTRNEQETSTVEQKVCRSLGLVAAGLQEVNDNEIAMNVYSRLRGTIFEIAISRCGNETVSRAICRVLEVCVLPTLLDDEQPRPAALAHNEDTRGIPASSVGCGRAVLAMSCMSLAAECFRRSGEDGETVWLSAVAEIAPHVVEFLDGGCGTEAEGRALACLRMSLEHSLEGLQSFTNGNYDSRKDMAVEYFRFATRLLSAESSVAVIIQKSSGSADAGLKGLQCNEIIVVREALLWWKSVFGPG-QGEVARAILAGAGGADNIARAFVCAARHTRCAGAVADALFALCKWVAQVSGNIDPDNVLRTCLTAAFAAEGVASLGLDVKVRETLYRSCISATGSMRDFRQALREFGRVYSL 911          
The following BLAST results are available for this feature:
BLAST of Gvermi5183.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6U8_9FLOR0.000e+063.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QDU7_CHOCR1.120e-15834.17Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 9..957
e-value: 2.2E-48
score: 167.2
NoneNo IPR availablePANTHERPTHR12363TRANSPORTIN 3 AND IMPORTIN 13coord: 13..920
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 13..856

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:543687..546563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5183.t1Gvermi5183.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 543687..546563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5183.t1 ID=Gvermi5183.t1|Name=Gvermi5183.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=959bp
MQENGDSIVSVTLENIQNALAILHRGDQRVSEADRYLDQARASPQLWHVL
PALLSSPSQPQLLFAAHALYSRIHADWLAMDEASRSAAVSLAVDALLSPS
LAQQSQATRSSAVYYLGKALGGAISRSPQAFQESMWEMLVMKLRDKPALK
CDVMAAIAAEMDHNATSHVANHVLIRAFCRSRAHQVVPDAVFLLISCPQS
GPISEERTQQLKAAVQCLQAWTPYADKMQIANALLHVIVVPQLAHSATEA
LNEVVGYSGTSHSLLLSTTKGLMAAFHGASGPDAHVIHHAISEVVCSLSE
WNADELMEQQTEQSGEIIRIAIDLLWTCLNAPDKSSFFAAIEGWMAWISA
DHLIQEDQARIGPERICAVLSVVIQRMGSLCFIRGYLNPELDDCESEEEK
GPVLELLATGALSIGHNKYLALVSKFLPTDDNMPPNQICAALEAMGASKD
STEDASISEEEWNESKQVLERVLRLADARTVNSLANGGVQHWQTALQRSA
LRALASHSLLIARDEKLFYTTAACAVNVLRKTELADWGAALLQSLSEIQP
RSLLPFLRDLITALNQSVSGMSTCAAEQATDAVASVASLLPLRQERVTAL
EEMVRKPCERLCVAAARGIDASLNEPVLCRDLALLCTAMRVYNDHEAVVF
VFQRIKEAVFHLARGLCGNGTISKAICSLLEVNALPTLFDEDDEASGDRV
YSRDEKSRLNLIVSITKLLGECFENSGPDGEDVWLKTMNKLIPDLVTGVE
DAPGSCEGEALVCITECVKCAVVGLNKFSADNYETQPEMTRMFFKLVTTL
TKRASSALIPAAADISRIAMRTLYCSNVGNVKASLNFWKALFSRTVQAPL
QQIVLNIANGPNGVSVGVLCAARNSRCTSDVADVLFAMCRIISGEMDENQ
FLRDCLTAAFGVAGVPKEGLDRNVREMLFRDCYVSVGSKKEFRRALDEVG
RMCNMVTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold