Gvermi5244.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5244.t1 vs. uniprot
Match: A0A2V3J699_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J699_9FLOR) HSP 1 Score: 130 bits (327), Expect = 2.880e-36 Identity = 64/88 (72.73%), Postives = 73/88 (82.95%), Query Frame = 0
Query: 88 MPSAPHGADCRALQQFVRLYSWRVLAESGFRAIAYWDESFTTVIAKDEFMASAKKRERNNITLRKQRVDAGAAALILQDVLDAMKRLE 175
MP APHG DC+ALQ F+RLYS RVL ESGF +AYWDES+T+VIA + FM +AKK ERNN LRK+RVDA AA+LILQDVLDAMK LE
Sbjct: 1 MPQAPHGGDCKALQTFIRLYSERVLHESGFHGLAYWDESYTSVIATETFMTNAKKSERNNHRLRKRRVDASAASLILQDVLDAMKSLE 88
BLAST of Gvermi5244.t1 vs. uniprot
Match: A0A3M2EJP1_9PROT (Putative pre-16S rRNA nuclease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M2EJP1_9PROT) HSP 1 Score: 79.3 bits (194), Expect = 2.350e-15 Identity = 57/149 (38.26%), Postives = 79/149 (53.02%), Query Frame = 0
Query: 29 GGPLVGMDVGTRHIGVALSDDARLISFPHSAYRR-RSVLSDVHRLRLLAAETQAHCAVVGMP---SAPHGADCRALQQFVRLYSWRVLAESGFRAIAYWDESFTTVIAKDEFMASAKKRERNNITLRKQRVDAGAAALILQDVLDAMKR 173
G PL+G+D GTR IGVA+SD R I+ P + RR R + D+ + LAA A V+G+P GA C +++ F R LA R I WDE +TV A A+ + +R R++ VD AAA IL D L+A++R
Sbjct: 19 GAPLIGLDHGTRMIGVAVSDSRRSIASPLTTLRRSRRLTPDLQAIEALAAARGAAAFVLGLPRNMDGSEGARCDSVRSFARS-----LARVSPRPILLWDERLSTVAAHAVLDATDARADR-----RRRLVDRLAAAHILADALEALRR 157
BLAST of Gvermi5244.t1 vs. uniprot
Match: A0A7C6LH06_9FIRM (Putative pre-16S rRNA nuclease n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6LH06_9FIRM) HSP 1 Score: 77.8 bits (190), Expect = 5.160e-15 Identity = 54/138 (39.13%), Postives = 75/138 (54.35%), Query Frame = 0
Query: 32 LVGMDVGTRHIGVALSDDARLISFPHSAYRRRSVLSDVHRLRLLAAETQAHCAVVGMPSAPHGADCRALQQFVRLYSWRVLAESGFRAIAYWDESFTTVIAKDEFMASAKKRERNNITLRKQRVDAGAAALILQDVLD 169
L+G+D+G R IG+A+SDD L + P Y R D+ L LA E A V G+P G + + VR ++ ++ +SG + + DE FTTVIA + +A+ RER R+Q VD AAALILQ LD
Sbjct: 7 LIGIDIGERRIGLAVSDDLWLTAQPRGVYHRSGEAKDIDYLVALAREEGAVAFVAGLPKRTTGEEGPEAAK-VRAFTRKLEEKSGL-PVRFADERFTTVIAHNLLLAADTSRER-----RRQVVDKLAAALILQTFLD 137
BLAST of Gvermi5244.t1 vs. uniprot
Match: UPI000DD2EA7F (Holliday junction resolvase RuvX n=1 Tax=Oceanibium sediminis TaxID=2026339 RepID=UPI000DD2EA7F) HSP 1 Score: 77.8 bits (190), Expect = 7.130e-15 Identity = 52/145 (35.86%), Postives = 79/145 (54.48%), Query Frame = 0
Query: 30 GPLVGMDVGTRHIGVALSDDARLISFPHSAYRRRSVLSDVHRLRLLAAETQAHCAVVGMPSAPHGADCRALQQFVRLYSWRVLAESGFRAIAYWDESFTTVIAKDEFMASAKKRERNNITLRKQRVDAGAAALILQDVLDAMKRL 174
GPL+ +D+GT+ IG+ALSD R I+ PH+ +RR D L L AE V+G+P G++ Q R ++ R LA G A +WDE +TV A+ + + R+R R + +D+ AA++ILQ +LD + L
Sbjct: 17 GPLLALDLGTKTIGLALSDVRRTIASPHATLKRRKFTLDAEALDKLIAERGVVGIVLGLPRNMDGSEGPRAQS-TRAFA-RNLAARGVPAQLFWDERLSTVAAERALLEADASRKR-----RAEIIDSVAASVILQGLLDRLGHL 154
BLAST of Gvermi5244.t1 vs. uniprot
Match: A0A847FLX5_9CHLR (Putative pre-16S rRNA nuclease n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A847FLX5_9CHLR) HSP 1 Score: 77.4 bits (189), Expect = 7.790e-15 Identity = 55/144 (38.19%), Postives = 78/144 (54.17%), Query Frame = 0
Query: 32 LVGMDVGTRHIGVALSDDARLISFPHSAYRRRSVLSDVHRLRLLAAETQAHCAVVGMPSAPHG---ADCRALQQFVRLYSWRVLAESGFRAIAYWDESFTTVIAKDEFMASAKKRERNNITLRKQRVDAGAAALILQDVLDAMK 172
L+G+DVG R IGVA+SD LI+ P R S + D R+ L E QA VVG P G A + ++++V + + AE I +WDE F+T A +E +A + +R R R+ +DA AAA+ILQD LD +
Sbjct: 3 LLGLDVGDRRIGVAVSDATGLIATPLEIVHRTSRVQDFRRIASLLREQQAGGLVVGHPLNDDGSASAQAQRIERYVATLAEALRAEGLDVPIIFWDERFSTQRA-EEAVALSGRRSRQ----RRGHIDAVAAAVILQDYLDEQR 141
BLAST of Gvermi5244.t1 vs. uniprot
Match: UPI00166DBCB2 (Holliday junction resolvase RuvX n=1 Tax=Aureimonas endophytica TaxID=2027858 RepID=UPI00166DBCB2) HSP 1 Score: 77.4 bits (189), Expect = 8.160e-15 Identity = 54/146 (36.99%), Postives = 74/146 (50.68%), Query Frame = 0
Query: 32 LVGMDVGTRHIGVALSDDARLISFPHSAYRRRSVLSDVHRLRLLAAETQAHCAVVGMP---SAPHGADCRALQQFVRLYSWRVLAESGFRAIAYWDESFTTVIAKDEFMASAKKRERNNITLRKQRVDAGAAALILQDVLDAMKRL 174
L G+D+GT+ IGVALSD + P S RR +D L+ L +TQA V+G+P G ++ + FVR Y + R IA+WDE +TV A ++ R + R +RVDA AAA ILQ LD + L
Sbjct: 19 LAGLDLGTKTIGVALSDLSWAFGQPRSVIRRTKFTADATALKALLDDTQAGGIVIGLPLNMDGTEGPRVQSTRAFVRNY-----LKFDDRQIAFWDERLSTVAATRAMISMDVSRAK-----RAERVDAAAAAFILQGALDRLASL 154
BLAST of Gvermi5244.t1 vs. uniprot
Match: A0A3E0KPE6_9FIRM (Putative pre-16S rRNA nuclease n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A3E0KPE6_9FIRM) HSP 1 Score: 77.4 bits (189), Expect = 9.360e-15 Identity = 54/148 (36.49%), Postives = 76/148 (51.35%), Query Frame = 0
Query: 29 GGPLVGMDVGTRHIGVALSDDARLISFPHSAYRRRSVLSDVHRLRLLAAETQAHCAVVGMPSAPHGA---DCRALQQFVRLYSWRVLAESGFRAIAYWDESFTTVIAKDEFMASAKKRERNNITLRKQRVDAGAAALILQDVLDAMKR 173
GG +G+DVG R IGVA+SD+ + + RRS+ DV RL L E + V+G+P G + A+Q F R L S + YWDE F+T A+ +A+ +R R RKQ +D AA++ILQ LD +R
Sbjct: 13 GGRTLGLDVGQRRIGVAVSDELGWTAQGLTVIERRSLAEDVRRLVALVKEYGCNGIVIGLPRRTDGRLGPEAEAVQAF-----GRQLEASAGVPVVYWDERFSTAQAEHTLLAAGVRRAR-----RKQVIDQLAASVILQAYLDRRRR 150
BLAST of Gvermi5244.t1 vs. uniprot
Match: A0A537QZR6_9PROT (Putative pre-16S rRNA nuclease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QZR6_9PROT) HSP 1 Score: 77.0 bits (188), Expect = 1.260e-14 Identity = 56/145 (38.62%), Postives = 74/145 (51.03%), Query Frame = 0
Query: 29 GGPLVGMDVGTRHIGVALSDDARLISFPHSAYRRRSVLSDVHRLRLLAAETQAHCAVVGMPSAPHGADCRALQQFVRLYSWRVLAESGFRAIAYWDESFTTVIAKDEFMASAKKRERNNITLRKQRVDAGAAALILQDVLDAMKR 173
G L+G+DVGT+ IG+ALSD +I+ P RRR DV L L + V+G+P + G D Q VR ++ +LA +A+WDE +T E +A R+R R Q VD AAA ILQ LDAM R
Sbjct: 16 GRRLMGLDVGTKTIGLALSDTRLVIASPLETIRRRRFREDVAALFALIDRHEVGGLVIGLPLSMDGGDSSRTQS-VRQFARNLLAVRDM-PVAFWDERLSTAAVTREMIAHDMTRKR-----RAQIVDRVAAAYILQGFLDAMGR 153
BLAST of Gvermi5244.t1 vs. uniprot
Match: A0A1Y3QP20_9FIRM (Putative pre-16S rRNA nuclease n=1 Tax=Firmicutes bacterium ZCTH02-B6 TaxID=1861639 RepID=A0A1Y3QP20_9FIRM) HSP 1 Score: 76.3 bits (186), Expect = 2.590e-14 Identity = 53/151 (35.10%), Postives = 78/151 (51.66%), Query Frame = 0
Query: 26 RQTGGPLVGMDVGTRHIGVALSDDARLISFPHSAYRRRSVLSDVHRLRLLAAETQAHCAVVGMPSAPHGA---DCRALQQFVRLYSWRVLAESGFRAIAYWDESFTTVIAKDEFMASAKKRERNNITLRKQRVDAGAAALILQDVLDAMKR 173
R GG +G+DVG R IGVA+SD+ + + RRS+ DV RL LA + VVG+P G + +A+Q F R L + + YWDE F+T A+ + + +R+R R+Q +D AA++ILQ LD +R
Sbjct: 10 RAAGGRALGLDVGQRRIGVAVSDELGWTAQGVTVIERRSLREDVRRLAALAKQYGCARIVVGLPRRTDGRLGPEAQAVQAF-----GRQLESATGLPVEYWDERFSTAQARHTLLEAGVRRDR-----RRQVIDQLAASVILQAYLDRRRR 150
BLAST of Gvermi5244.t1 vs. uniprot
Match: A0A3A0ERK8_9PROT (Putative pre-16S rRNA nuclease n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0ERK8_9PROT) HSP 1 Score: 76.3 bits (186), Expect = 2.650e-14 Identity = 57/167 (34.13%), Postives = 84/167 (50.30%), Query Frame = 0
Query: 14 MRSELQRFKLHVRQTGGPLVGMDVGTRHIGVALSDDARLISFPHSAYRRRSVLSDVHRLRLLAAETQAHCAVVGMP---SAPHGADCRALQQFVRLYSWRVLAESGFRAIAYWDESFTTVIAKDEFMASAKKRERNNITLRKQRVDAGAAALILQDVLDAMKRLENG 177
M ELQ F + G L+G+DVGT+ IGVA+SD R I+ P +R+ + D+ RL LAAE Q V+G+P G ++++QF + R+ IA WDE ++T + +A R++ R + VD AAA ILQ LD ++ G
Sbjct: 5 MIMELQDFATML-PPAGRLMGLDVGTKTIGVAVSDATRFIATPLETIQRKKLSPDLDRLAALAAERQVAGIVIGLPVNMDGTMGPRVQSVRQFAKDCGQRLALP-----IALWDERWSTAAVTRQLIAEDASRKK-----RAEVVDRMAAAYILQGALDYLRGQAGG 160 The following BLAST results are available for this feature:
BLAST of Gvermi5244.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5244.t1 ID=Gvermi5244.t1|Name=Gvermi5244.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=180bpback to top |