Gvermi5428.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5428.t1
Unique NameGvermi5428.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length291
Homology
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BLAST of Gvermi5428.t1 vs. uniprot
Match: A0A2V3IZ12_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ12_9FLOR)

HSP 1 Score: 81.6 bits (200), Expect = 4.750e-15
Identity = 67/177 (37.85%), Postives = 91/177 (51.41%), Query Frame = 0 
Query:   27 ERGKSMPWDLDDDFFNRQLDFI-PIPALDE---------DSEIYKNFISHKPEPLEAAWPNFQDTELVAAAIPNSSQSSPLMTSIPNQTLPSQSIHETDYFSSCDETTVERNEEDLSLELKIKDIQKNFVIQSSGRTAQLRTQF--KREIQKPPTTAGITLNDLKAVFHLERPKAEK 191
            E   +  WD + + F+    ++   P  DE          +  +K+F            P+    E    AI + S SS  + S  + + P    H  D  S       E ++ED+ LE+KIKDI+K+F   SS + AQ R+    K+EIQKPPTTAGITL+DLKAVFHLERPKAEK
Sbjct:   25 ENRHAFTWDWNSELFDSNFSYLLSFPCTDEIENENDGTATTRDFKDFFK----------PSIPHHEGNRIAISSPSDSSQTVPSFTHNSSPLLGAHRED-LSRTQADLDECHDEDM-LEMKIKDIKKDFARHSSAK-AQERSHLSVKKEIQKPPTTAGITLDDLKAVFHLERPKAEK 188
The following BLAST results are available for this feature:
BLAST of Gvermi5428.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZ12_9FLOR4.750e-1537.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 173..218
e-value: 2.2E-7
score: 30.7
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 156..240
score: 11.672182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:1906341..1907213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5428.t1Gvermi5428.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 1906341..1907213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5428.t1 ID=Gvermi5428.t1|Name=Gvermi5428.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=291bp
MADDSFIDSNNPYDELTQGSCKEDPFERGKSMPWDLDDDFFNRQLDFIPI
PALDEDSEIYKNFISHKPEPLEAAWPNFQDTELVAAAIPNSSQSSPLMTS
IPNQTLPSQSIHETDYFSSCDETTVERNEEDLSLELKIKDIQKNFVIQSS
GRTAQLRTQFKREIQKPPTTAGITLNDLKAVFHLERPKAEKRLRLKRTTF
SNLSRYYGISKWPFRTIRDAMNRMNANDKMLKSKSLSKEKSRKLKDQQRL
LSGVIDLIYSDPKESKDTNTLAVLLRIVAARENPEEFSDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom