Gvermi5220.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5220.t1
Unique NameGvermi5220.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length312
Homology
BLAST of Gvermi5220.t1 vs. uniprot
Match: A0A2V3IDX8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDX8_9FLOR)

HSP 1 Score: 218 bits (556), Expect = 5.580e-66
Identity = 138/306 (45.10%), Postives = 169/306 (55.23%), Query Frame = 0
Query:   17 LVSRSHAAAGFLAPCRTDSQCTGLRECRKITPYAIDANTGIDFASRLSVSNGID--VTSILSAITSQRCDSSAKYCVCVSDTLEDEPLCSNDNDCPEKGESCATNCIADAQKEAFVDINASGNILSAVCPNPTRCPSERQCVPVVVTADSTFSL-----CLARFSSPSSPGDANGEAEGNSGDGEGGDS----SEVCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYHGEVMMMKTYCARIGGCTRSIMHVNSPRYRRALQIASDTPHLTFTALAARYGTNAEEHVLRTAVRLGL 311
            L   + AA G LAPCR+DS C G R CR         +T    A    + N     V +IL +IT    D    YC+CV  T ED   CS+D+DC +  E  A NC+AD+Q EA  +  +         P+ T C   +    ++ +   TF       CLARF   S+ G                      SE+CIA +SL HL PH+L+Y KH++ARVLCD H SCATAGHMVR+ G  MMMK+YC  +G C RSI  VNSPRY RALQI SD+P LTFTA AARY T AEEHVLRTAV +GL
Sbjct:   16 LAVSAFAAGGNLAPCRSDSNCAGERSCRAFALDLSSISTIFQSAQSEDLENPDSGTVLAILQSITQSCRDED--YCLCVP-TDEDLIGCSSDSDCSDGEECLADNCVADSQLEAAKEPKSCXXXXXXTVPD-TIC--AKLTAGLLDSLAETFGFEDNGFCLARFKESSTSGKPGSXXXXXXXXXXXXXXXXXXSEICIAVKSLRHLQPHQLVYRKHMTARVLCDTHGSCATAGHMVRFRGRAMMMKSYCELVGNCERSITLVNSPRYTRALQIPSDSPDLTFTAFAARYATTAEEHVLRTAVHIGL 315          
BLAST of Gvermi5220.t1 vs. uniprot
Match: A0A2V3IQ05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ05_9FLOR)

HSP 1 Score: 136 bits (343), Expect = 5.640e-35
Identity = 81/211 (38.39%), Postives = 111/211 (52.61%), Query Frame = 0
Query:  103 CSNDNDCPEKGESCATNCIADAQKEAFVDINASGNILSAV--CPNPTRCPSERQCVPVVVTADSTFSLCLARFSSPSSPGDANGEAEGNSGDGEGGDSSEVCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYHGEVMMMKTYCARIGGCTRSIMHVNSPRYRRALQIASDTPHLTFTALAARYGTNAEEHVLRTAVRLGL 311
            C N++DC +  +   TN + + +     D        S +  C           CV    T+   F       +        +G    N+       +S+VCIAA+SL+HL+  +L+Y +H  ARVLCD+  SCAT GH+V +HG  MMM +YC  +  C   IMHVNSPRY RA+++ S T  L FTA AARY T  EEH+L TA+RLGL
Sbjct:   46 CKNNSDCSDGRKCLLTNTVTEVECADKADTIGCECRKSEMKDCSXXXXXXXXXXCVDSSNTSSQPFCFSKKAAAKDDELTPVDGPTAPNAS--PAAQTSDVCIAARSLAHLSQRDLVYARHRVARVLCDSSGSCATPGHIVLFHGVPMMMTSYCEAVS-CVAKIMHVNSPRYTRAVRVPSLTDGLQFTAFAARYQTTTEEHLLATAIRLGL 253          
BLAST of Gvermi5220.t1 vs. uniprot
Match: A0A2V3IN45_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN45_9FLOR)

HSP 1 Score: 132 bits (331), Expect = 1.430e-32
Identity = 98/285 (34.39%), Postives = 137/285 (48.07%), Query Frame = 0
Query:   75 LSAITSQRCDSSAKYCVCVSDTLEDEPLCSNDNDCPEKGESC---------------ATNCIADAQKEAFVDINASGNILSAVCPNPTRCPSERQCVPVVVTADSTFSLCLARFSS-----------PS------------SPGDANGEAEGNSGDGEGGDSSE----------VCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYHGEVMMMKTYCARIGGCTRSIMHVNSPRYRRALQIASDTPHLTFTALAARYGTNAEEHVLRTAVRLGL 311
            +S  +S  C  ++ YC C+  T++ +  C          E+C                + C+ ++Q + FVD+          C +   CPS   CV ++      FS C A  S+           PS            +P     ++   + DG   +  E          VCIAA+SL HL  + LLY+KH+ ARVLCDA QSCAT GHMV Y+G  MMM+TYC  +  C  ++M VNS RY+   ++ S T  L+F A AARY T  EEH+LRTAVR+GL
Sbjct:   49 ISINSSTDCSQTSSYCACLPQTIQ-QATCXXXXX-XXXXETCIPVPGRVSSVIKFPDVSVCVHNSQMD-FVDLTP--------CSSVAGCPSHATCVTILF-----FSFCAASSSAEPPITQSPAPEPSLEPEIPDSTPVAAPLHLEQDSPKQTEDGRDQEQREDQPDDIDGVPVCIAAKSLQHLPENMLLYSKHIPARVLCDAQQSCATPGHMVLYNGRPMMMRTYCQLVQ-CRSAVMPVNSVRYQWRWRLDSHTHGLSFLAFAARYQTRVEEHMLRTAVRVGL 316          
BLAST of Gvermi5220.t1 vs. uniprot
Match: R7Q4J5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4J5_CHOCR)

HSP 1 Score: 122 bits (306), Expect = 1.060e-30
Identity = 61/111 (54.95%), Postives = 77/111 (69.37%), Query Frame = 0
Query:  201 VCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYHGEVMMMKTYCARIGGCTRSIMHVNSPRYRRALQIASDTPHLTFTALAARYGTNAEEHVLRTAVRLGL 311
            VCI A +L HL  HEL+Y++HVS+RVLCDA  SCAT GH+VRY G+ MMMK YC RI  C   I+ VNSPRY   +++ S T  L +T+ AARY +  EE  +  AVR+GL
Sbjct:   44 VCIDAAALQHLQTHELVYSRHVSSRVLCDAFGSCATQGHIVRYAGKAMMMKNYC-RIVECEERIIKVNSPRYSIGMRVPSKTDGLEYTSFAARYESVVEEAAIAAAVRMGL 153          
BLAST of Gvermi5220.t1 vs. uniprot
Match: R7QQZ1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQZ1_CHOCR)

HSP 1 Score: 128 bits (321), Expect = 2.800e-30
Identity = 97/293 (33.11%), Postives = 135/293 (46.08%), Query Frame = 0
Query:   39 GLRECRKITPYAIDANTGIDFASRLSVSNGIDVTSILSAITSQRCD-------------SSAKYCVCV-SDTLEDEPLCSNDNDCPEKGESCATNCIADAQKEAFVDINASGNILSAVCPNPTRCPSERQCVPVVVTADSTFSLCLARFSSPSSPGDANGEAEGNSGDG----EGG--DSSEVCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYHGEVMMMKTYCARIGGCTRSIMHVNSPRYRRALQIASDTPHLTFTALAARYGTNAEEHVLRTAVRLGL 311
            G +  RK  P     +    F + L ++N + +T      TS+  +             SS + C+CV +D LE    C++ NDC   GE C             V  N S    S    N    P E        T   T           +  GD+  E    + DG     GG  D  ++CI A++L HL+ + L++ KH  +RVLCD + SCAT G MV + G  M M TYC  +G C  ++M VNSPR+ R ++I S+T  L +TA AA Y T AEE ++R AVR GL
Sbjct:  156 GRQSGRKAAPLGTSKDLAGLFRTSLPIANRMGLTGDTCTSTSECAEGRICVDIANQDTCSSGERCLCVPTDGLES---CTSSNDCSTAGEVC-------------VQGNESTLCFSEETANAEDMPIETS------TTGGTGXXXXXEEMPTAGDGDSESEGSITNPDGLNVPSGGNDDDDDLCIDARALGHLSRNGLVFEKHAVSRVLCDENDSCATRGDMVVFRGHAMRMSTYCESVG-CKEAVMEVNSPRFNRGMRIKSNTKGLEYTAFAAPYETQAEESLIRMAVRFGL 425          
BLAST of Gvermi5220.t1 vs. uniprot
Match: R7Q934_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q934_CHOCR)

HSP 1 Score: 129 bits (324), Expect = 1.070e-29
Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 0
Query:  194 EGGDSSEVCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYHGEVMMMKTYCARIGGCTRSIMHVNSPRYRRALQIASDTPHLTFTALAARYGTNAEEHVLRTAVRLGL 311
            EG +  +VCI +++L HL   EL++ KH  ARV+CDA  SCAT GHMV Y GE MMM TYC ++G C +  M VNSP++++ +++ S T  L F ALAARYGT AEE+++  AV+LGL
Sbjct:  731 EGNEEDDVCIDSEALRHLGQRELVFLKHRWARVVCDASGSCATRGHMVMYEGETMMMGTYCEKVG-CEKRTMLVNSPKFKKGMRVNSKTSGLEFLALAARYGTKAEENMISFAVKLGL 847          
BLAST of Gvermi5220.t1 vs. uniprot
Match: R7QS06_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS06_CHOCR)

HSP 1 Score: 125 bits (315), Expect = 1.050e-28
Identity = 64/140 (45.71%), Postives = 90/140 (64.29%), Query Frame = 0
Query:  180 GDANGEAEGNSGDGEG--------GDSSEVCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYHGEVMMMKTYCARIGGCTRSIMHVNSPRYRRALQIASDTPHLTFTALAARYGTNAEEHVLRTAVRLGL 311
            GD + E+EG+  + +G         D  +VCI  ++L HL+ + L++ KH  +RVLCD + SCAT GHMV + G  M M TYC  +G C  ++M VNSPR++R ++I S+T  L +TA AARY T AEE ++R AVR GL
Sbjct:  472 GDGDSESEGSITNPDGLDVPPGGNDDEDDVCIDVRALGHLSSNGLVFEKHAVSRVLCDENDSCATRGHMVVFRGHAMRMSTYCESVG-CKEAVMEVNSPRFKRGMRIESNTKGLEYTAFAARYDTQAEESLIRMAVRFGL 610          
BLAST of Gvermi5220.t1 vs. uniprot
Match: A0A2V3IFA6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFA6_9FLOR)

HSP 1 Score: 120 bits (301), Expect = 2.740e-27
Identity = 77/225 (34.22%), Postives = 103/225 (45.78%), Query Frame = 0
Query:   91 VCVSDTLEDEPLCSNDNDCPEKGESCATNCIADAQ---KEAFVDINASGNILSAVCPNPTRCPSERQCVPVVVTADSTFS-LCLARFSSPSSPGDANGEAEGNSGDGEGGDSSEVCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYHGEVMMMKTYCARIGGCTRSIMHVNSPRYRRALQIASDTPHLTFTALAARYGTNAEEHVLRTAVRLGL 311
            VC + TL   PL      C E GES +   +   +   +       AS       C     C SE +C       DS  +  C+ +                           EVCI+   L H+   E+ Y+ H  ARVLCD H SCATAGH+V Y    MMM TYC R+G C + IMHVN  RY+R   ++S++  L F+  +ARY T  EE +L  A+R+GL
Sbjct:  265 VCAARTLSLGPLVDEPTPCSEGGESLSIKDLFGGESPCRSRSTPTPASSIESPPKCTGENECSSEEEC-----RIDSNGAPRCIRK--------------------------KEVCISVHHLLHMNESEMTYSTHRLARVLCDEHNSCATAGHIVVYEAVPMMMSTYCNRVG-CVQKIMHVNGVRYQRGRMVSSNSKGLMFSTFSARYNTGIEEKLLGVAIRIGL 457          
BLAST of Gvermi5220.t1 vs. uniprot
Match: A0A2V3IF61_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF61_9FLOR)

HSP 1 Score: 116 bits (290), Expect = 4.860e-27
Identity = 59/111 (53.15%), Postives = 73/111 (65.77%), Query Frame = 0
Query:  201 VCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYHGEVMMMKTYCARIGGCTRSIMHVNSPRYRRALQIASDTPHLTFTALAARYGTNAEEHVLRTAVRLGL 311
            +CI+   LSHL   +L Y+ H  ARVLCD H SCATAGH+V Y    MMM +YC  +  C + IMHVNS RY+R   + S++  LTFTA AARY T  EE +L  A+RLGL
Sbjct:  162 ICISVHHLSHLHGDDLRYSTHRLARVLCDKHNSCATAGHIVIYEAVPMMMSSYCKTVR-CVQKIMHVNSVRYKRRSVVQSNSKGLTFTAFAARYNTVLEEKLLGMAIRLGL 271          
BLAST of Gvermi5220.t1 vs. uniprot
Match: A0A2V3IKG9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKG9_9FLOR)

HSP 1 Score: 114 bits (285), Expect = 5.980e-27
Identity = 58/111 (52.25%), Postives = 71/111 (63.96%), Query Frame = 0
Query:  201 VCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYHGEVMMMKTYCARIGGCTRSIMHVNSPRYRRALQIASDTPHLTFTALAARYGTNAEEHVLRTAVRLGL 311
             CIA ++L HL    LLY KH+ +RVLCD + SCAT GHMVR+H   MMMK+YC R   C   IM VNS RY+R   + S +P L FTA AAR+ T  EE +L  A  +GL
Sbjct:  100 ACIATEALKHLPRSSLLYDKHLYSRVLCDKYGSCATGGHMVRFHSRTMMMKSYCIRTT-CDERIMFVNSLRYKRKFLVESSSPGLEFTAFAARFETVFEESILGAAHFIGL 209          
The following BLAST results are available for this feature:
BLAST of Gvermi5220.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3IDX8_9FLOR5.580e-6645.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQ05_9FLOR5.640e-3538.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IN45_9FLOR1.430e-3234.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4J5_CHOCR1.060e-3054.95Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QQZ1_CHOCR2.800e-3033.11Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q934_CHOCR1.070e-2952.54Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QS06_CHOCR1.050e-2845.71Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IFA6_9FLOR2.740e-2734.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IF61_9FLOR4.860e-2753.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKG9_9FLOR5.980e-2752.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..311
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:674199..675134 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5220.t1Gvermi5220.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 674199..675134 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5220.t1 ID=Gvermi5220.t1|Name=Gvermi5220.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=312bp
MTFFATTLLFAAVFAVLVSRSHAAAGFLAPCRTDSQCTGLRECRKITPYA
IDANTGIDFASRLSVSNGIDVTSILSAITSQRCDSSAKYCVCVSDTLEDE
PLCSNDNDCPEKGESCATNCIADAQKEAFVDINASGNILSAVCPNPTRCP
SERQCVPVVVTADSTFSLCLARFSSPSSPGDANGEAEGNSGDGEGGDSSE
VCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYHGEVMMM
KTYCARIGGCTRSIMHVNSPRYRRALQIASDTPHLTFTALAARYGTNAEE
HVLRTAVRLGL*
back to top