Gvermi8000.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi8000.t1
Unique Name	Gvermi8000.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	87

Homology

[Close]

BLAST of Gvermi8000.t1 vs. uniprot
Match: A0A2V3IQ12_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ12_9FLOR)

HSP 1 Score: 67.8 bits (164), Expect = 3.990e-13
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 0

Query:    4 AASELDPDIKPAPA-KPKRRAQPGDFEKQVDRIRRDLGTIRTNLAVAEKALE 54
            AAS+ + D  P  A KPKRRAQPGDFE+QV+ IRRD+GTIR+NLA AEKAL+
Sbjct:    3 AASKNNGDTPPPSAQKPKRRAQPGDFERQVEHIRRDIGTIRSNLAAAEKALD 54

[Close]

BLAST of Gvermi8000.t1 vs. uniprot
Match: R7QKY2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKY2_CHOCR)

HSP 1 Score: 52.8 bits (125), Expect = 3.700e-7
Identity = 23/37 (62.16%), Postives = 34/37 (91.89%), Query Frame = 0

Query:   20 KRRAQPGDFEKQVDRIRRDLGTIRTNLAVAEKALEVA 56
            K+RAQPGDFE+QV++IR D+ T+R+NLA A+KAL+++
Sbjct:   19 KKRAQPGDFERQVEQIRTDIKTVRSNLAEAQKALDMS 55

The following BLAST results are available for this feature:

BLAST of Gvermi8000.t1 vs. uniprot

BLAST of Gvermi8000.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IQ12_9FLOR	3.990e-13	69.23	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QKY2_CHOCR	3.700e-7	62.16	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24226	contig	ScGOVlb_24226:601401..601850 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi8000.t1	Gvermi8000.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24226 601401..601850 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi8000.t1 ID=Gvermi8000.t1|Name=Gvermi8000.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=87bp
MSGAASELDPDIKPAPAKPKRRAQPGDFEKQVDRIRRDLGTIRTNLAVAE
KALEVAPAVAPLAQPQQQLQNECREDHGHDAVEQRT*