Gvermi8078.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi8078.t1
Unique Name	Gvermi8078.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	945

Homology

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BLAST of Gvermi8078.t1 vs. uniprot
Match: A0A2V3IW43_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW43_9FLOR)

HSP 1 Score: 248 bits (633), Expect = 3.670e-65
Identity = 164/417 (39.33%), Postives = 225/417 (53.96%), Query Frame = 0

Query:    1 MQRHPSGCDPQAFR--GRHRAPVPPQHLPPSRTI-DPALLTLPGMQTALGELERSSPSLYRGTIDRANLTRMANDITEILVRHVNRLRLQANIAAHAAHPHHTPTPPQRHST-----RKRARPLPCVEEIDLPL--------SPHHTSSAPRPSSYRQHPHAADVPRTLSLPRQRRRRTVRYVFSDDSDSERVRPSRHSERPHRSKEIRHNLNDDLAFEHMEQAARLHQHSPPTKPEHAHPDTDPFLSPQQTSDDEVPYVPKLVCPKLYVRERALQSDFASLTPIITDPDDDTDTEHFRKWNARRIKKPVHEDPNENLFMQRQCAIFPFGRKTRLRRDVIVDVQLMNSLAKQGLHHKNVSNILYTLPLIPDDFLHVGGRHWTDFDTTQAFRKTSSALVS-DFHVGRRHVMPITRNGT 400
            MQRHP GCDP ++     HR P   +    +R   DPAL+TLPGMQTAL ELER  PSLYRGTI R N+ R+A+D+T IL+ HVN++R Q+   +        PT P+R          R + L   E+ D P         +P    +  R    RQ        +  + PR+RRR      + D S+SE     R S+RP R+KEIR NLNDDLA+E++ +AAR                     + Q + + E     K+V PK YVRER L+SD+ASLTPI T+ DDDTDTE +RKWNARR++KP +    +   ++  C+IFP GRK RL  D++V++ LM   A  G      S++L  LP IP   +  GG +  D + T  FR +S+   S +  + R+HV+P    G+
Sbjct:    1 MQRHPEGCDPSSYHTYSSHRKPATTRERARNRASWDPALITLPGMQTALRELERLGPSLYRGTIPRHNMDRLAHDLTSILLTHVNQIRTQSKRPS--------PTEPKREGVGDDVRSSRIQSLGSKEDRDQPAGRYRLRRGAPSRDPTDEREKGVRQRNSLQHDIQDNARPRRRRRSAY---YDDYSESEADEQFRRSQRPRRTKEIRENLNDDLAYEYIAEAARQEXXXXXXXXXXXXXAKVAAEAVQSSDESEEEIFLKVVRPKPYVRERTLESDYASLTPISTERDDDTDTEMYRKWNARRVRKPAYAYGAQESSIRELCSIFPLGRKNRLVSDMLVNISLMRRSAAYGQRAIVNSSVLQRLPRIPSRCIVPGGWNVRDVELTHGFRSSSAKAESINRDLNRQHVLPAPNQGS 406

The following BLAST results are available for this feature:

BLAST of Gvermi8078.t1 vs. uniprot

BLAST of Gvermi8078.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IW43_9FLOR	3.670e-65	39.33	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 783..823
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 697..746
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 576..647
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 456..480
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 456..524
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 671..746
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 576..633

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24226	contig	ScGOVlb_24226:942577..946041 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi8078.t1	Gvermi8078.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24226 942577..946041 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi8078.t1 ID=Gvermi8078.t1|Name=Gvermi8078.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=945bp
MQRHPSGCDPQAFRGRHRAPVPPQHLPPSRTIDPALLTLPGMQTALGELE
RSSPSLYRGTIDRANLTRMANDITEILVRHVNRLRLQANIAAHAAHPHHT
PTPPQRHSTRKRARPLPCVEEIDLPLSPHHTSSAPRPSSYRQHPHAADVP
RTLSLPRQRRRRTVRYVFSDDSDSERVRPSRHSERPHRSKEIRHNLNDDL
AFEHMEQAARLHQHSPPTKPEHAHPDTDPFLSPQQTSDDEVPYVPKLVCP
KLYVRERALQSDFASLTPIITDPDDDTDTEHFRKWNARRIKKPVHEDPNE
NLFMQRQCAIFPFGRKTRLRRDVIVDVQLMNSLAKQGLHHKNVSNILYTL
PLIPDDFLHVGGRHWTDFDTTQAFRKTSSALVSDFHVGRRHVMPITRNGT
PAITNNTPAKHHVPARKVQPQQSHVPAAKPIAPALESALCQNGSNAPTVA
GAVHQHMSSAPLSSNAAAHTDVQYSRRLNGTNPIPPKRAEPQARLSNDNV
LRPAAVEPVHTTRPTDGRQEGIHSDFARRPVLAMKQIVGLQATQPIQQAS
NHPMPGPDGMHAQTPIRSDVLQSMILNAQQQKQQPQYNMQLAMTPNRGSS
SQIHPQKRSYPREQQKQVQPISDPRQAPAQGQVSADQRYLPHGISGRIPS
KEEIEAYQFLLRQGLPSQSVEQYALPGHSESRANPINKRRDQSQSIRRGP
RYGSSDNGTDRVIGNGTTFPKVPLNSSPIDKNRRQPTLGLPATQTGSVVS
HVRSGPQVAQPTPHPSAENTMALLNGPKISESANVLIMPDSDADPNSPTG
GHELSESKKDNQPTIQVKRNEKSIPNASLAHFVSNCEPAPEVQMGSTRPP
ELPSSAVKGVPRWQCERPNLAATPLNGHATIQSQLPESRGSNVDPIQAVQ
EQKIGGDDQRRKYEEDYRAAYALQVRKAMEEIRKKNGNADQELG*