Gvermi7936.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi7936.t2 vs. uniprot
Match: A0A2V3IRB1_9FLOR (Protein THYLAKOID FORMATION 1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRB1_9FLOR) HSP 1 Score: 383 bits (984), Expect = 7.910e-130 Identity = 219/319 (68.65%), Postives = 251/319 (78.68%), Query Frame = 0
Query: 1 MTIAFVTSPAAARLRRRPSPLRQCSRPXXXXXXXXXXVRVCARDPN-SASPPSVSSQLDAPPVPSANSVNAPGSSFASRFGDLRGNSIEPVSATMSRFNRAFARPIPIVYRSIINEMLTTTHLAVVCAMWRFDAVFAFGFDSIFSTFLRYYPSEQERDLLYAACASSLNLDIDLIKTSAASVRDWLEGKTEDDIFAALNTASPSASADAVGPVIEALAYIRHSADFDWYYSRLFGIGLIQVMDAVGAQLSAANAEKWADKIGLVQSKFTSEMGAYLSNMERLKQAEQIFAEATAREAKKTAERLAAKAQAAAKQAAQLE 318
MT+AF+ SPA R XXXXXXXXXX CA+DP S+SP S S+ + + P S F RF DLRG +EPVSATM+RFN FARPIPIVYR+++NEMLTTTHLAVVCAMWRFDAVFAFGFD+IFS FLRYYP E+ERD LY ACA SL+LD+ I+ +AA V WL+ KTE D+F ALN A PSASAD VGPV+EALAYIR +ADFDWYYSRLFGIGLIQ+M+AVG +L+ ANAEKWA ++GL+QSKFT+EMGAYLSNMERLKQAEQIFAEATAREAKKTAERLAA+AQAAAK+A QLE
Sbjct: 1 MTVAFLHSPAVRLAAARTPHXXXXXXXXXXXXXXXXXXXXCAQDPPLSSSPQSASTADTSAXXXXXXXXSPPRSDFRHRFDDLRGKPVEPVSATMARFNAQFARPIPIVYRAVVNEMLTTTHLAVVCAMWRFDAVFAFGFDAIFSAFLRYYPDERERDQLYVACAQSLHLDVHAIRRTAADVSAWLQDKTEADVFNALNAAPPSASADTVGPVVEALAYIRDAADFDWYYSRLFGIGLIQIMNAVGVELTVANAEKWAHRVGLMQSKFTAEMGAYLSNMERLKQAEQIFAEATAREAKKTAERLAARAQAAAKEADQLE 319
BLAST of Gvermi7936.t2 vs. uniprot
Match: A0A1X6PJF0_PORUM (Uncharacterized protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJF0_PORUM) HSP 1 Score: 231 bits (588), Expect = 3.030e-70 Identity = 119/248 (47.98%), Postives = 173/248 (69.76%), Query Frame = 0
Query: 73 SSFASRFGDLRGNSIEPVSATMSRFNRAFARPIPIVYRSIINEMLTTTHLAVVCAMWRFDAVFAFGFDSIFSTFLRYYPSEQERDLLYAACASSLNLDIDLIKTSAASVRDWLEGKTEDDIFAALNTASPSASADAVGPVIEALAYIRHSADFDWYYSRLFGIGLIQVMDAVGAQLSAANAEKWADKIGLVQSKFTSEMGAYLSNMERLKQAEQIFAEATAREAKKTAERLAAKAQAAAKQAAQLEQE 320
S F ++ RG + VS TM++FN F RP+P VYR+II+E+L TTHLA CAMW++DA+FA+GFD F+ FL++YP E ER LY A A+SL + + A+SVR W EGK+E DIFA AS + + DA P + AL Y+ ++ +F++YYSRL GIG+I++M G +L+ NA +W+D++ + ++K T+E+G Y + +ERLK AEQ+FAE AR+A+KTAERL +A+ AA +A + E+E
Sbjct: 81 SKFYKKYNSYRGKDVPTVSETMTKFNELFPRPVPSVYRNIISEILMTTHLAKHCAMWKYDAIFAYGFDETFNEFLQFYPIESERTALYHAVANSLGFSPEELAKDASSVRSWAEGKSEADIFA----ASKAGAGDASEPAVAALQYVANADEFEFYYSRLHGIGVIKLMTGAGVELTPENAGRWSDELQVPKAKLTTELGTYEAAVERLKAAEQLFAEIAARDARKTAERLERRAEQAAAEATEAEKE 324
BLAST of Gvermi7936.t2 vs. uniprot
Match: A0A7S3A1V4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A1V4_9RHOD) HSP 1 Score: 207 bits (526), Expect = 2.770e-61 Identity = 102/241 (42.32%), Postives = 159/241 (65.98%), Query Frame = 0
Query: 75 FASRFGDLRGNSIEPVSATMSRFNRAFARPIPIVYRSIINEMLTTTHLAVVCAMWRFDAVFAFGFDSIFSTFLRYYPSEQERDLLYAACASSLN-LDIDLIKTSAASVRDWLEGKTEDDIFAALNTASPSASADAVGPVIEALAYIRHSADFDWYYSRLFGIGLIQVMDAVGAQLSAANAEKWADKIGLVQSKFTSEMGAYLSNMERLKQAEQIFAEATAREAKKTAERLAAKAQAAAKQA 314
FA +F +R + V+ TM++FN +FARP+P VYRSI+NE++T HL VC MWR+DAVF FGF I + +YPS +E++ L++ +L+ LD+ ++ +V ++ GKTED++ + + + S GPV+ A Y++ + ++WYYSR FG G+I +++ +G +L+ N E+WA IG + K E+G YLS++ERLKQAEQ+FA+ ARE KK A++LA A+AA ++A
Sbjct: 56 FAKKFESIRDAKVPTVTDTMAKFNESFARPVPSVYRSIVNEIITLNHLTTVCPMWRYDAVFGFGFTQIMDKYFSFYPSAEEKEKLFSCIVGALSGLDLQKMRDDTKAVEAFIAGKTEDEVLSMIESGSSE------GPVLSAFQYVKEAEFYEWYYSRNFGFGVIFIIEQLGGELTDENVERWAKAIGASEVKIKDELGVYLSSLERLKQAEQMFADLAAREKKKAADQLAVDAKAALEEA 290
BLAST of Gvermi7936.t2 vs. uniprot
Match: A0A7S0BGJ2_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BGJ2_9RHOD) HSP 1 Score: 204 bits (519), Expect = 1.990e-60 Identity = 102/236 (43.22%), Postives = 153/236 (64.83%), Query Frame = 0
Query: 75 FASRFGDLRGNSIEPVSATMSRFNRAFARPIPIVYRSIINEMLTTTHLAVVCAMWRFDAVFAFGFDSIFSTFLRYYPSEQERDLLYAACASSLN-LDIDLIKTSAASVRDWLEGKTEDDIFAALNTASPSASADAVGPVIEALAYIRHSADFDWYYSRLFGIGLIQVMDAVGAQLSAANAEKWADKIGLVQSKFTSEMGAYLSNMERLKQAEQIFAEATAREAKKTAERLAAKAQA 309
FA +F +R + V+ TM++FN FARP+P VYR+I+NE++T HL VC MW +DAV+ FGF I + +YPS +E++ L + SL LD+ ++ A ++ ++ KTEDD+ A + + S GPV+ A Y++ S +DWYYSR FG G+I +++ +G +L+ AN E+WA IG+ + K E+G YLS++ERLKQAEQ+FA+ ARE KK A++LA A+A
Sbjct: 55 FAKKFESIRHAKVPTVTDTMAKFNETFARPVPSVYRTIVNEIITLNHLTTVCPMWHYDAVYGFGFIEIMEKYFSFYPSAEEKEKLLSCIVGSLTGLDLQTMRDDAKAIEAFVAEKTEDDVLAMIESGSRE------GPVLSAFQYVKESEFYDWYYSRSFGFGVIFIVEKLGGELTDANLERWAKAIGVSEVKIKDELGVYLSSLERLKQAEQMFADLAAREKKKAADQLAVDAKA 284
BLAST of Gvermi7936.t2 vs. uniprot
Match: S0F2S3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F2S3_CHOCR) HSP 1 Score: 199 bits (507), Expect = 1.100e-59 Identity = 107/197 (54.31%), Postives = 132/197 (67.01%), Query Frame = 0
Query: 128 MWRFDAVFAFGFDSIFSTFLRYYPSEQERDLLYAACASSLNLDIDLIKTSAASVRDWLEGKTEDDIFAALNTASPSASADAVGPVIEALAYIRHSADFDWYYSRLFGIGLIQVMDAVGAQLSAANAEKWADKIGLVQSKFTSEMGAYLSNMERLKQAEQIFAEATAREAKKTAERLAAKAQAAAKQAAQLEQEQQTD 324
MWRFD+VFA+GFD +F FLRYYP ERD LY AC S+ LD + I+++AA+V DWLEGK+E D+ AL A ASA VGPVIEA+AY+RH+ FDWYYSR+FGIGLIQVM VG LS NAE WAD + + +SKF +EMGAYLS+M AA+AQAAAK+A QLE+E + +
Sbjct: 1 MWRFDSVFAYGFDQVFEQFLRYYPDLDERDALYKACVESVRLDYNTIRSNAAAVGDWLEGKSEKDVLDALAAAPEGASAADVGPVIEAVAYVRHAGPFDWYYSRMFGIGLIQVMAKVGVDLSITNAEAWADAMKMEKSKFAAEMGAYLSSMXXXXXXXXXXXXXXXXXXXXXXXXXAARAQAAAKEADQLEKEDELE 197
BLAST of Gvermi7936.t2 vs. uniprot
Match: A0A7S1XEQ4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEQ4_9RHOD) HSP 1 Score: 171 bits (433), Expect = 8.640e-48 Identity = 89/218 (40.83%), Postives = 138/218 (63.30%), Query Frame = 0
Query: 78 RFGDLRGNSIEPVSATMSRFNRAFARPIPIVYRSIINEMLTTTHLAVVCAMWRFDAVFAFGFDSIFSTFLRYYPSEQERDLLYAACASSLNLDIDLIKTSAASVRDWLEG-KTEDDIFAALNTASPSASADAVGPVIEALAYIRHSADFDWYYSRLFGIGLIQVMDAVGAQLSAANAEKWADKIGLVQSKFTSEMGAYLSNMERLKQAEQIFAEATAR 294
++G LRG S++ V+ + FN F RP+ VY SIINE L +THLA VCA +R+D +F +GF F+ FL YP+E +R LL+ A +L+LD I+ A +VR WLE +ED++F+ L++ + V +AL Y+ + F+W+YSR+FGIGL ++M+ VG ++ +W++K+ + +K E +Y S +E++K AEQ+FAE TAR
Sbjct: 27 KYGHLRGRSVKTVADALRDFNDTFNRPVFSVYSSIINEFLASTHLARVCAAFRYDPIFGYGFTESFNDFLANYPNEGDRTLLFDAIIKALDLDRQQIRDDAEAVRSWLESVSSEDEVFSLLDSPGNN-------KVAQALHYVATAPYFEWFYSRVFGIGLFKIMEKVGVKIDQEALRRWSEKLNISIAKLEDEWASYGSAIEKMKVAEQLFAEVTAR 237
BLAST of Gvermi7936.t2 vs. uniprot
Match: A0A7S0ZHJ1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZHJ1_9RHOD) HSP 1 Score: 171 bits (433), Expect = 3.620e-47 Identity = 97/238 (40.76%), Postives = 142/238 (59.66%), Query Frame = 0
Query: 73 SSFASRFGDLRGNSIEPVSATMSRFNRAFARPIPIVYRSIINEMLTTTHLAVVCAMWRFDAVFAFGFDSIFSTFLRYYPSEQERDLLYAACASSLNLDIDLIKTSAASVRDWLEGKTEDDIFAALNTASPSASADAVGPVIEALAYIRHSADFDWYYSRLFGIGLIQVMDAVGAQLSAANAEKWADKIGLVQSKFTSEMGAYLSNMERLKQAEQIFAEATAREAKKTAERLAAKAQAA 310
S FA ++ R S+ PV ++ F + FARP+P VY ++INE LTTTHL+VV + +DA+FA+GF+ F+ FL+YYPSE E++ L+ +L LD+ I+ AASVR W+EGKT +D+FA + SAD V A R + ++ SR+F +G + +++AV A + EK A + + M + ME+LK AEQ+FAE AR+ +K AERLA KA+ A
Sbjct: 65 SEFAKKYSSKRNASVRPVGESVKAFFKLFARPLPTVYSTLINETLTTTHLSVVNYAFNYDAIFAYGFEESFNRFLQYYPSESEKERLFECLLKALELDVGKIRKDAASVRQWVEGKTIEDLFAVAD-----GSADDGSSVASAFRTARENDRMSFHISRMFALGCVYLLEAVKADAEGEDCEKLAAVLDVSAFGIKDAMDQNRAGMEKLKAAEQLFAEVAARDKRKNAERLAEKAKLA 297
BLAST of Gvermi7936.t2 vs. uniprot
Match: A0A5J4Z783_PORPP (Protein THYLAKOID FORMATION 1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z783_PORPP) HSP 1 Score: 170 bits (430), Expect = 6.990e-47 Identity = 94/246 (38.21%), Postives = 147/246 (59.76%), Query Frame = 0
Query: 75 FASRFGDLRGNSIEPVSATMSRFNRAFARPIPIVYRSIINEMLTTTHLAVVCAMWRFDAVFAFGFDSIFSTFLRYYPSEQERDLLYAACASSLNLDIDLIKTSAASVRDWLEGKTEDDIFAALNTASPSASADAVGPVIEALAYIRHSADFDWYYSRLFGIGLIQVMDAVGAQLSAANAEKWADKIGLVQSKFTSEMGAYLSNMERLKQAEQIFAEATAREAKKTAERLAAKAQAAAKQAAQLEQE 320
FA F R ++PV+ T+ F ++ARPIP VY S++NE LTTTHL+V AM+ +DA+FA+GF F F +YP E++R L+ +L LD + + A++V+ W EGKT D+ A + +S S + + A R +++SR+F +G++ +++AVG + + A+K A+K+G M Y + MERLK AEQ++AE AR++K+ AERLA KA+ A ++A + E E
Sbjct: 57 FAKMFAKERTKDVKPVANTVQAFFNSYARPIPTVYSSLVNETLTTTHLSVYHAMFTYDAMFAYGFKESFDRFFAFYPDEEQRKRLFTCMLQALELDEKKLVSDASAVKAWTEGKTVADLMAIADGSSEDTSCPGL---VSAFKVAREKKPMFYHFSRMFSLGIVYLLEAVGGKTTQEEADKIAEKLGKTSYYIKDAMDQYRAGMERLKAAEQLYAEVNARDSKRLAERLAEKAKRAEEEALRAENE 299
BLAST of Gvermi7936.t2 vs. uniprot
Match: M1VAS6_CYAM1 (Photosystem II biogenesis protein Psb29 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VAS6_CYAM1) HSP 1 Score: 170 bits (431), Expect = 8.360e-47 Identity = 94/245 (38.37%), Postives = 150/245 (61.22%), Query Frame = 0
Query: 75 FASRFGDLRGNSIEPVSATMSRFNRAFARPIPIVYRSIINEMLTTTHLAVVCAMWRFDAVFAFGFDSIFSTFLRYYPSEQERDLLYAACASSLNLDIDLIKTSAASVRDWLEGKTEDDIFAALNTASPSASADAVGPVIEALAYIRHSADFDWYYSRLFGIGLIQVMDAVGAQLSAANAEKWADKIGLVQSKFTSEMGAYLSNMERLKQAEQIFAEATAREAKKTAERLAAKAQAAAKQAAQLEQ 319
FA +F RG + VS T++RF R RP+ Y+ ++E+LTT HLA+VCAM+R+D +FA GF S++ F R YP ER+ L+ +L+LD+ + A +++GKTE ++ + + SA+A PVI AL R AD ++YY+RLFGIGL+++M + G +++ + +KWA+ + + ++ ++G Y +ME+L QAE +F E ARE + A+ LA KAQ A ++ + EQ
Sbjct: 74 FARKFAPFRGKPVRTVSETVTRFYRNLKRPVVFYYQQAVDEILTTAHLALVCAMFRYDVIFALGFVSVYRDFFRSYPRPDERESLFRCICDALDLDVGQVTKEADDALAYVQGKTEAELIEEIERDTGEDSAEAQ-PVIAALRACRR-ADGEYYYTRLFGIGLMKIMSSCGVEINLESVKKWANMLKISYARLDQDIGTYQMSMEKLTQAEVMFKELEARERARIADELARKAQEAEEELRKREQ 316
BLAST of Gvermi7936.t2 vs. uniprot
Match: A0A7S0XWV0_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0XWV0_HEMAN) HSP 1 Score: 162 bits (410), Expect = 7.030e-44 Identity = 108/282 (38.30%), Postives = 163/282 (57.80%), Query Frame = 0
Query: 45 PNSASPPSVSSQLDAPPVPSANSVNAPGSS-FASRFGDLRGNSIEPVSATMSRFNRAFARPIPIVYRSIINEMLTTTHLAVVCAMWRFDAVFAFGFDSIFSTFLRYYPSEQERDLLYAACASSLNLDIDLIKTSAASVRDWLEGKTEDDIFAALNTASPSASADAVGPVIEALAYIRHSADFDWYYSRLFGIGLIQVMDAVGAQLSAANAEKWADKIGLVQ----------SKFTSEMGAYLSNMERLKQAEQIFAEATAREAKKTAERLAAKAQAAAKQAA 315
P +AS SV++ A P+ + V+ G+ A +FG LRG IEP ++ RF + +P+P V+R NE+L +HL +V A + +DA +A G S F F + ++ R L+ A ++L L+ + I+ A V W +GKTE DI AA+N S VG + L+ + + + DW Y+R FG GLI+ M VG + + ANA+KWA+ IG+ + S+F S++G +LS++E+ +Q Q+FAE ARE KK AERLA A+ AAK+AA
Sbjct: 38 PAAASSHSVTNVATALPIRRSLEVSMSGTGKLAEKFGHLRGADIEPCDKSVQRFYEFYGKPVPFVFRGATNEILYMSHLDLVNARFSYDAFWACGVFSTFDVFFQGIDADT-RTKLFDALMTALKLEPETIRADAEKVLSWAQGKTEADIVAAMNGEDQS----EVGSI---LSKAKSAGEDDWIYTRNFGAGLIKTMQVVGVEPNTANAKKWAEAIGISENTSAMTGLSMSRFESDVGVFLSSVEKFQQVIQLFAEVEAREKKKVAERLAGMAEEAAKEAA 311 The following BLAST results are available for this feature:
BLAST of Gvermi7936.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi7936.t2 ID=Gvermi7936.t2|Name=Gvermi7936.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=341bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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