Gvermi8077.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi8077.t1
Unique Name	Gvermi8077.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	206

Homology

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BLAST of Gvermi8077.t1 vs. uniprot
Match: A0A2V3IVZ1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVZ1_9FLOR)

HSP 1 Score: 221 bits (564), Expect = 2.640e-69
Identity = 120/209 (57.42%), Postives = 158/209 (75.60%), Query Frame = 0

Query:    1 MMHELRTRLGHLLSSAEQRGLLPAAADAAPPPAPADADPAAXXX----AAPDAPRRAVELIIGDELQRRSSVDEFAPASDADVRAEQRRWARLGLDLRAVQTMVDACTGAARLGPLLERQRHIIALIVTIHERSVRLKHALDANNVQARRTTAAVESLDKLNVTRADVQHSLECAVATANILGASHFAHDEQMCSFKNFLKHNPPAFPE 205
            MM+ELR+R+G L+S+AE++GLLP++ +  P  +   A+  A       A  D  R  V+ IIG E Q++SSVDEF   S+AD+RAEQ +WARLGLD  AV++MVDACT    +  LL  Q+ ++ALIVT++E+SVRLK A+DANN QAR+TT A+E LDK+NV+ ++VQ SLE AVATANILGASHFAHD++MCSFKNFLK++PP  PE
Sbjct:   71 MMYELRSRIGELISTAEEKGLLPSSGEKQPSSSHGSAELTASFNTGDPAGEDDDR--VDKIIGKEGQKQSSVDEFVLHSEADIRAEQEKWARLGLDYEAVKSMVDACTSGKEVKELLHNQKELMALIVTVYEKSVRLKEAMDANNYQARKTTKAIEGLDKINVSLSEVQESLESAVATANILGASHFAHDDEMCSFKNFLKYHPPRAPE 277

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BLAST of Gvermi8077.t1 vs. uniprot
Match: R7Q5F0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5F0_CHOCR)

HSP 1 Score: 150 bits (379), Expect = 2.790e-41
Identity = 71/142 (50.00%), Postives = 101/142 (71.13%), Query Frame = 0

Query:   62 LQRRSSVDEFAPASDADVRAEQRRWARLGLDLRAVQTMVDACTGAARLGPLLERQRHIIALIVTIHERSVRLKHALDANNVQARRTTAAVESLDKLNVTRADVQHSLECAVATANILGASHFAHDEQMCSFKNFLKHNPPAF 203
            L  R+S+D+       D RAEQ RWARLG+D   V  +++ CTG  ++  +L RQ  ++  I+   E+SVRL  A++ + V A+RTT A+E LD++++  +DVQ +LE AVATANILGASHF+HD++MCSFKNFL+HNPP +
Sbjct:  145 LPERTSIDDLTRELSEDSRAEQNRWARLGIDEATVSAVLEQCTGGPKMASVLNRQALLLQQIMAAKEKSVRLNAAMEKHGVAAKRTTMALERLDRIHIALSDVQDNLESAVATANILGASHFSHDDEMCSFKNFLRHNPPKY 286

The following BLAST results are available for this feature:

BLAST of Gvermi8077.t1 vs. uniprot

BLAST of Gvermi8077.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IVZ1_9FLOR	2.640e-69	57.42	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7Q5F0_CHOCR	2.790e-41	50.00	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..49
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..8
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..28
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 9..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 29..205
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..28

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24226	contig	ScGOVlb_24226:940982..941599 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi8077.t1	Gvermi8077.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24226 940982..941599 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi8077.t1 ID=Gvermi8077.t1|Name=Gvermi8077.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=206bp
MMHELRTRLGHLLSSAEQRGLLPAAADAAPPPAPADADPAADADAAPDAP
RRAVELIIGDELQRRSSVDEFAPASDADVRAEQRRWARLGLDLRAVQTMV
DACTGAARLGPLLERQRHIIALIVTIHERSVRLKHALDANNVQARRTTAA
VESLDKLNVTRADVQHSLECAVATANILGASHFAHDEQMCSFKNFLKHNP
PAFPE*