Gvermi8043.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8043.t1
Unique NameGvermi8043.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length232
Homology
BLAST of Gvermi8043.t1 vs. uniprot
Match: R7QR43_CHOCR (Brix domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR43_CHOCR)

HSP 1 Score: 288 bits (736), Expect = 1.310e-94
Identity = 148/231 (64.07%), Postives = 175/231 (75.76%), Query Frame = 0
Query:    1 LTREQARAISDEFTPVLAGHARPRVVLTTAQRPTDAALNFIKELLPVVPRAAYFARHRASVAAFCAAAAAKRATDVLIVAERAGAVHALTHVHLPAGPTAVYALSSFTPARALPARGRPTAHHPPELIVSNFSTALGLRVARMLAALFPHPPHFAARQAVTLRNQRDFIFFRFHRYVFAAARDSARLQELGPRFTLKLRALHRGLFHHPDRADHHFRWKPAAHVNRRRFFL 231
            LTREQA AI+DEFTPVLAG  RPRVV+TT  RP+D + +F+K LLPV+P++ YF R  ASVA F A+AA K  TDV++V E  GA+  LTHVHLP GPTAVY LSSF P   +  RGR T H  PE+I+++F+T LGLRV RML +LFPH P+F  RQ  T  NQRDFIFFRFHRYVF A RD ARLQELGPRFTLKLRAL +G+F  P +ADH F+WK    ++RRRFFL
Sbjct:   72 LTREQALAITDEFTPVLAGDVRPRVVITTGLRPSDVSFDFVKALLPVLPKSIYFERLDASVAEFAASAAGKGYTDVVLVKEDRGALSTLTHVHLPEGPTAVYKLSSFVPNAKIKGRGRCTGH-TPEVILNHFTTRLGLRVGRMLGSLFPHEPNFVGRQVATFHNQRDFIFFRFHRYVFTAERDRARLQELGPRFTLKLRALQKGVFMDPQKADHEFKWKTKTDIDRRRFFL 301          
BLAST of Gvermi8043.t1 vs. uniprot
Match: A0A7S1XCX8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XCX8_9RHOD)

HSP 1 Score: 189 bits (481), Expect = 1.080e-55
Identity = 110/231 (47.62%), Postives = 143/231 (61.90%), Query Frame = 0
Query:    5 QARAISDEFTPVLAGHARPRVVLTTA-QRPTDAALNFIKELLPVVPRAAYFARH---RASVAAFCAAAAAKRATDVLIVAERAGAVHALTHVHLPAGPTAVYALSSFTPARALPARGRPTAHHPPELIVSNFSTALGLRVARMLAALFPHPPHFAARQAVTLRNQRDFIFFRFHRYVFAAARDSARLQELGPRFTLKLRALHRGLFHHPDRADHHFRWKPAAHVNRRRFFL 231
            Q +   DEF  VL G   P+V+LTT  QR +  +  F+ E+L ++P + Y  R    R    A  AA  A+  TDVLI+ E    +  LTH+HLP GP+AVY LSSFTP++ +P  GR + H P ELI++NFST LG ++ RML+A FPH P    RQ VT+ NQRDFIFFRFHRY+F      ARLQELGPRFTLKL+ + +G+    D     + W+     +RR FFL
Sbjct:  106 QQQDAQDEFAEVLEGRQVPKVMLTTGRQRVSKLSYQFLGEILRLIPNSVYMKRDPEKRIRDIALWAADTARCFTDVLILKEDHRKLSTLTHIHLPDGPSAVYRLSSFTPSKNIPNHGRGSRHQP-ELILNNFSTQLGHKIGRMLSAWFPHRPDHIGRQVVTIHNQRDFIFFRFHRYIFKEDASKARLQELGPRFTLKLKYIQKGIV---DTEKGEYIWRATKERDRRTFFL 332          
BLAST of Gvermi8043.t1 vs. uniprot
Match: A0A5J4YSY4_PORPP (Brix domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSY4_PORPP)

HSP 1 Score: 188 bits (477), Expect = 2.640e-55
Identity = 98/202 (48.51%), Postives = 130/202 (64.36%), Query Frame = 0
Query:    5 QARAISDEFTPVLAGHARPRVVLTTAQRPTDAALNFIKELLPVVPRAAYFARHRASVAAFCAAAAAKRATDVLIVAERAGAVHALTHVHLPAGPTAVYALSSFTPARALPARGRPTAHHPPELIVSNFSTALGLRVARMLAALFPHPPHFAARQAVTLRNQRDFIFFRFHRYVFAAARDSARLQELGPRFTLKLRALHRGLF 206
            + + + DEF  V  G   P V++TT  +P      F++ELL V+P + Y+ R    +      +A +  +DVL+V +    + AL H+HL AGPTAVY LSS+ PAR +   G  T+H P ELI++ F+T +G RV RML ALFPH P+F  RQ VTL NQRDFIFFRFHRY+F      ARLQELGPRFTL+L+++ RG F
Sbjct:   91 EEQQLRDEFAAVFQGEQTPHVLITTGLKPKQVTYGFVQELLYVIPNSVYYERKSYDIKEVVKYSAMREFSDVLVVKDDHKQLTALIHIHLAAGPTAVYRLSSYIPARNIHGHGTKTSHQP-ELILNRFTTGIGHRVGRMLGALFPHEPNFKGRQVVTLHNQRDFIFFRFHRYMFNDKGSGARLQELGPRFTLRLQSMQRGAF 291          
BLAST of Gvermi8043.t1 vs. uniprot
Match: A0A7S0ZK03_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZK03_9RHOD)

HSP 1 Score: 181 bits (460), Expect = 7.440e-54
Identity = 97/196 (49.49%), Postives = 126/196 (64.29%), Query Frame = 0
Query:   11 DEFTPVLAGHARPRVVLTTAQRPTDAALNFIKELLPVVPRAAYFARHRASVAAFCAAAAAKRATDVLIVAERAGAVHALTHVHLPAGPTAVYALSSFTPARALPARGRPTAHHPPELIVSNFSTALGLRVARMLAALFPHPPHFAARQAVTLRNQRDFIFFRFHRYVFAAARDSARLQELGPRFTLKLRALHRGLF 206
            DEF  V  G   P+V++TTA+ P     +FI+ LLP++P++ Y+ R    +      A  +  +D+LIV +    +  LTH+HLP GPTAVY L+SF P+  +   GR T H P E+I++ F+T LG RV RML AL+PH  +F  RQAVTL NQRDFIFFRFHRY F      A LQELGPRFTLK+R L +G F
Sbjct:   10 DEFASVFNGEIDPKVLITTARNPLQICYSFIQSLLPMIPKSIYYKRSEYDIREIVKYAKRRAFSDILIVKDDRNQLTTLTHIHLPNGPTAVYRLTSFVPSDDIKDHGRRTVHIP-EVILNRFTTQLGHRVGRMLGALWPHRANFEGRQAVTLHNQRDFIFFRFHRYQFNQDGSRAALQELGPRFTLKMRNLQKGTF 204          
BLAST of Gvermi8043.t1 vs. uniprot
Match: A0A7S0ITJ0_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0ITJ0_9EUKA)

HSP 1 Score: 179 bits (454), Expect = 7.640e-52
Identity = 100/225 (44.44%), Postives = 140/225 (62.22%), Query Frame = 0
Query:   11 DEFTPVLAGHARPRVVLTTAQRPTDAALNFIKELLPVVPRAAYFARHRASVAAFCAAAAAKRATDVLIVAERAGAVHALTHVHLPAGPTAVYALSSFTPARALPARGRPTAHHPPELIVSNFSTALGLRVARMLAALFPHPPHFAARQAVTLRNQRDFIFFRFHRYVF----AAARDSARLQELGPRFTLKLRALHRGLFHHPDRADHHFRWKPAAHVNRRRFFL 231
            DEF P  +G   PR ++TT + P+D  L+F++ELL ++P + Y  R+  +V    AA   +  T++L++ E+A    +L  + LP GPTA + L++    + +   GRPTAH P ELI++NFST LG R+ RMLA LFPH P F  RQ VT+ NQRDF+FFR HRYVF         + RLQELGPRFTLKL++L  G F  P   ++ ++ K     +RRRF +
Sbjct:   93 DEFAPHFSGGLPPRTMITTGRYPSDKLLSFVEELLVMLPNSEYRPRNAITVKRIVAACTERSFTNLLLLTEKAKKPQSLWLIKLPGGPTARFKLTTLVLPKRISGHGRPTAHRP-ELILNNFSTRLGHRLGRMLACLFPHDPQFKGRQVVTMHNQRDFVFFRHHRYVFEDNTGKGDVAVRLQELGPRFTLKLKSLQLGTFD-PQHGEYEWKHKADLDTSRRRFHV 315          
BLAST of Gvermi8043.t1 vs. uniprot
Match: A0A7S1KZ06_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1KZ06_ALECA)

HSP 1 Score: 175 bits (443), Expect = 5.860e-50
Identity = 93/221 (42.08%), Postives = 128/221 (57.92%), Query Frame = 0
Query:   11 DEFTPVLAGHARPRVVLTTAQRPTDAALNFIKELLPVVPRAAYFARHRASVAAFCAAAAAKRATDVLIVAERAGAVHALTHVHLPAGPTAVYALSSFTPARALPARGRPTAHHPPELIVSNFSTALGLRVARMLAALFPHPPHFAARQAVTLRNQRDFIFFRFHRYVFAAARDSARLQELGPRFTLKLRALHRGLFHHPDRADHHFRWKPAAHVNRRRFFL 231
            DEF     G+ +P+V++TT + PT    N +KEL+ V+P   Y+ R        C  A  K  TD+++ AE+  AV  +   HLP GPT+ + L+     + +       A H PELI++NF+T LG RV R LAALFP  P F  R+ VT  NQRDF+FFR +RY F A     +LQE+GPRFTLK R L  GLF      +  + W+P + V+R+RFF+
Sbjct:  117 DEFNKYFTGNTKPKVLMTTQKAPTKTLFNLMKELIHVIPNTFYYPRRDFEFKKICEYAGNKGFTDIILFAEKGKAVTGMYICHLPKGPTSFWRLTRLKLGQEMKGSATCNATHNPELILNNFTTRLGRRVGRQLAALFPQKPDFNGRRTVTFHNQRDFVFFRHYRYAFKADGTKCKLQEIGPRFTLKCRFLQHGLFD-AKAGEFEYIWRPDSQVSRKRFFV 336          
BLAST of Gvermi8043.t1 vs. uniprot
Match: A0A1Y1XU22_9FUNG (Brix-domain-containing protein (Fragment) n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XU22_9FUNG)

HSP 1 Score: 171 bits (434), Expect = 3.650e-49
Identity = 103/232 (44.40%), Postives = 137/232 (59.05%), Query Frame = 0
Query:    4 EQARAISDEFTPVLAGHARPRVVLTTAQRPTDAALNFIKELLPVVPRAAYFARHRA----SVAAFCAAAAAKRATDVLIVAERAGAVHALTHVHLPAGPTAVYALSSFTPARALPARGRPTAHHPPELIVSNFSTALGLRVARMLAALFPHPPHFAARQAVTLRNQRDFIFFRFHRYVFAAARDSARLQELGPRFTLKLRALHRGLFHHPDRADHHFRWKPAAHVNRRRFFL 231
            E      DEF     G A P++++TT++RP+     F +ELL V P + +  R        +  FC     +  TDV+IV E     +A+T VHLP GPTA + LSS  P + +   GR +AH P E+I++NF+T LG  + RM  +LFPH P F  RQ  T  NQRDFIFFR HRYVF + +  A LQELGPRFTLKL+ L +GLF  P   ++ + +KP    +RRRFFL
Sbjct:   64 ENDEEAQDEFAQYFDGKA-PKMLITTSKRPSPGVYEFAEELLSVFPNSEFVKRKSQFEIQDIVQFCIN---RDYTDVMIVNEDRKEPNAVTLVHLPNGPTAYFKLSSIVPGKRIQGHGRSSAHKP-EIIMNNFNTRLGHTIGRMFTSLFPHVPEFQGRQVATFHNQRDFIFFRRHRYVFKSGK-RADLQELGPRFTLKLKWLQKGLFD-PKNGEYEWIFKPEMETSRRRFFL 288          
BLAST of Gvermi8043.t1 vs. uniprot
Match: M2XX80_GALSU (Brix domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XX80_GALSU)

HSP 1 Score: 168 bits (425), Expect = 8.850e-48
Identity = 95/221 (42.99%), Postives = 130/221 (58.82%), Query Frame = 0
Query:   11 DEFTPVLAGHARPRVVLTTAQRPTDAALNFIKELLPVVPRAAYFARHRASVAAFCAAAAAKRATDVLIVAERAGAVHALTHVHLPAGPTAVYALSSFTPARALPARGRPTAHHPPELIVSNFSTALGLRVARMLAALFPHPPHFAARQAVTLRNQRDFIFFRFHRYVFAAARDSARLQELGPRFTLKLRALHRGLFHHPDRADHHFRWKPAAHVNRRRFFL 231
            DEF+ V +G   P+VV+    + T    NFI ELL ++P + ++ R ++S+      AA K  TDV+   E    +  L HVHLP GP A Y++ S+ P + +   GR TA  P E+I+S+F+T LG+R+ARML ALF   P ++ RQ VTL NQRDFIFFRFHRY F        LQE GPRFTL+L+ L +GL   P   D    ++     ++  FFL
Sbjct:   75 DEFSDVFSGAVIPKVVVVPGLKATRMTYNFISELLQIIPNSVFYERKKSSLNQASVKAAEKGFTDVIFTEENRKQITGLFHVHLPHGPCAYYSIRSYVPCKKVVGHGRSTASKP-EVILSHFTTQLGIRIARMLGALFALEPEYSGRQVVTLHNQRDFIFFRFHRYQFDDRGVKVSLQEQGPRFTLQLQQLTKGL---PGNDDAEIEFRKKKKASKYEFFL 291          
BLAST of Gvermi8043.t1 vs. uniprot
Match: A0A397V111_9GLOM (Anticodon-binding protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397V111_9GLOM)

HSP 1 Score: 167 bits (423), Expect = 2.430e-47
Identity = 97/225 (43.11%), Postives = 134/225 (59.56%), Query Frame = 0
Query:   10 SDEFTPVLAGHARPRVVLTTAQRPTDAALNFIKELLPVVPRAAYFARH-RASVAAFCAAAAAKRATDVLIVAERAGAVHALTHVHLPAGPTAVYALSSFTPARALPARGRPTAHHPPELIVSNFSTALGLRVARMLAALFPHPPHFAARQAVTLRNQRDFIFFRFHRYVFAAARDSARLQELGPRFTLKLRALHRGLFHHPDRADHHFRW--KPAAHVNRRRFFL 231
            SDEF+        P++++TT++RP+ A   F  EL+ V P + +  R  + S+     +   +  TDV+I++E     +A+T VHLP GPTA + L+S   +R +   GR + H P ELI++NF+T LG  + R   ALFPH P F  RQ  T  NQRDFIFFR HRYVF   ++ A LQE+GPRFTLKL+ L +G+F      D  + W  KP    +RRRFFL
Sbjct:   85 SDEFSAYFREGIAPKILITTSKRPSKAGYEFTSELVDVFPNSQFMKRESKYSIKRIIESCMNRDFTDVMIISEDRKIPNAVTLVHLPEGPTAYFKLTSIKLSREIDGHGRSSCHKP-ELILNNFNTRLGHTIGRWFQALFPHVPEFQGRQVATFHNQRDFIFFRRHRYVFKN-KEKAELQEIGPRFTLKLKWLQKGIFD----KDEEYEWIFKPELETSRRRFFL 303          
BLAST of Gvermi8043.t1 vs. uniprot
Match: A0A813HNN6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HNN6_POLGL)

HSP 1 Score: 168 bits (425), Expect = 2.840e-47
Identity = 93/228 (40.79%), Postives = 131/228 (57.46%), Query Frame = 0
Query:    4 EQARAISDEFTPVLAGHARPRVVLTTAQRPTDAALNFIKELLPVVPRAAYFARHRASVAAFCAAAAAKRATDVLIVAERAGAVHALTHVHLPAGPTAVYALSSFTPARALPARGRPTAHHPPELIVSNFSTALGLRVARMLAALFPHPPHFAARQAVTLRNQRDFIFFRFHRYVFAAARDSARLQELGPRFTLKLRALHRGLFHHPDRADHHFRWKPAAHVNRRRFFL 231
            E+  AI DEF    AG   P+++LTT + P+    +F+KEL+ V+P   Y+ R        C  AA K  TDVL+  E+A  V  +   HLP GPT+ + L+     + +       A H PELI++NF T LG R+ R LAALFP  P F  R+ +T  NQRDF+FFR +RY F    +  +LQE+GPRFTLKLR +  G F      ++ F W+P + V+R++ F+
Sbjct:  111 EEDEAI-DEFEKYFAGGKTPKILLTTQKAPSKKLFDFLKELVHVIPNTFYYPRRDFPFKKICEYAANKDFTDVLLFHEKAKVVQGVYICHLPKGPTSYWRLTRLKLGQEMAGGATCNASHNPELILNNFVTRLGRRIGRQLAALFPQKPEFKGRRTITFHNQRDFVFFRHYRYNFKDDGEKCKLQEIGPRFTLKLRYMQHGTFDSKS-GEYEFIWRPDSQVSRKKMFV 336          
The following BLAST results are available for this feature:
BLAST of Gvermi8043.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QR43_CHOCR1.310e-9464.07Brix domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A7S1XCX8_9RHOD1.080e-5547.62Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YSY4_PORPP2.640e-5548.51Brix domain-containing protein n=1 Tax=Porphyridiu... [more]
A0A7S0ZK03_9RHOD7.440e-5449.49Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0ITJ0_9EUKA7.640e-5244.44Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S1KZ06_ALECA5.860e-5042.08Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A1Y1XU22_9FUNG3.650e-4944.40Brix-domain-containing protein (Fragment) n=1 Tax=... [more]
M2XX80_GALSU8.850e-4842.99Brix domain-containing protein n=1 Tax=Galdieria s... [more]
A0A397V111_9GLOM2.430e-4743.11Anticodon-binding protein n=2 Tax=Gigaspora TaxID=... [more]
A0A813HNN6_POLGL2.840e-4740.79Hypothetical protein n=1 Tax=Polarella glacialis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007109Brix domainSMARTSM00879Brix_2coord: 26..201
e-value: 1.4E-29
score: 114.3
IPR007109Brix domainPFAMPF04427Brixcoord: 37..199
e-value: 2.7E-18
score: 66.8
IPR007109Brix domainPROSITEPS50833BRIXcoord: 23..207
score: 32.544659
NoneNo IPR availableGENE3D3.40.50.10480coord: 23..197
e-value: 6.2E-26
score: 93.1
NoneNo IPR availablePANTHERPTHR22734:SF3RIBOSOME PRODUCTION FACTOR 1coord: 8..231
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 23..204
IPR044281U3 snoRNP protein/Ribosome production factor 1PANTHERPTHR22734U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4coord: 8..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:794356..795051 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8043.t1Gvermi8043.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 794356..795051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8043.t1 ID=Gvermi8043.t1|Name=Gvermi8043.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=232bp
LTREQARAISDEFTPVLAGHARPRVVLTTAQRPTDAALNFIKELLPVVPR
AAYFARHRASVAAFCAAAAAKRATDVLIVAERAGAVHALTHVHLPAGPTA
VYALSSFTPARALPARGRPTAHHPPELIVSNFSTALGLRVARMLAALFPH
PPHFAARQAVTLRNQRDFIFFRFHRYVFAAARDSARLQELGPRFTLKLRA
LHRGLFHHPDRADHHFRWKPAAHVNRRRFFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007109Brix
IPR044281IMP4/RPF1