Gvermi8150.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi8150.t1
Unique Name	Gvermi8150.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	466

Homology

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BLAST of Gvermi8150.t1 vs. uniprot
Match: A0A2V3ISX8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISX8_9FLOR)

HSP 1 Score: 363 bits (933), Expect = 1.370e-118
Identity = 207/454 (45.59%), Postives = 292/454 (64.32%), Query Frame = 0

Query:    1 MIRNNKLSYLTAQLPWYSFEIVRTSTSSLVTSVLITLVSYQTAAIVSDVVLGFKKRHEAKLKYFAMIILTRYLSSPLSVLNSILRKDWLTRLYYNGEIPRDTAISRDPEPIKIKTVLTMLVLLTVTPLIDVVLLALAMSRTHVLDFDEAGFGAVSLGASERSNALETTPYLSHCRKAPFEKRSSDNLDVSFLLCETPLLPEAEDINVTGVEIVIVDGYMISTRVILQGIAVLATKSARMQTIEGNYVVKATMGKSSSGLLVQTALEQFSGYCGATNITGTVPPKRSDQFTTQIQLLESVAISCNILSKDSTERIEVLGKITSALRERVTLVRSDMMLVRKESDVHGAFSEERSIMLLHRTQKNASLFALIISVVLLLSLRFIVRMTIASDVEEGLLGCIRDQLPESSVASSLKAGEQRISFRRKYQVGDHGYYGMMQKQLPEVERFEKAIVGAV 454
            MIRNNKLSY + +  WY F+I +TS SSLVTSVL+TL+SYQ A+I+  + LG KKRHE KLK F +++LTRYLSSPL+VLNSILR DWLTRLYY G+IPRDT ISRDP  + ++T   + +L+   P+ID +L+AL++SRT+ L F+EAGF  V LG     N +ET PY+S C  A FE+R  D + V+F LCE+P LPE    NVTGVEI + +   +  RVILQG  +L+ K A++   +    V A +   S   LV  AL+ F+ +CG  N  G +PPK++D F T   LL SV ++C  ++    ER     +I  +L+E+VT + ++  LVR  SD+   F E ++ +LL RT++N+S+F LI+  V+LL +R  +    A+DVE+GL   I D+L      +++    +R+ FR+KYQ G+    G+  ++  EVE F   +VG V
Sbjct:    1 MIRNNKLSYASVEREWYLFDISQTSLSSLVTSVLVTLISYQVASILFTITLGMKKRHETKLKNFGIVLLTRYLSSPLAVLNSILRVDWLTRLYYRGDIPRDTHISRDPASVHVRTASVLFLLVIAPPMIDTMLVALSLSRTNELTFEEAGFRGVLLGVDRGLNVVETIPYVSLCNLAKFEERPEDLVRVAFQLCESPSLPEDAPENVTGVEISLENQVQVVVRVILQGYVLLSQKYAQVNGNDVEMHVMAAVTNRSVAPLVDIALDGFAKHCGERNTLGPLPPKQNDVFGTNKVLLASVRVACGNVTISEEERRTHATQIVESLKEKVTFIEAESTLVRNASDLGSNFVENKNDVLLQRTERNSSMFMLIVVAVILLLVRATLGTIFANDVEKGLEVLILDRLGCGERHTTMWKDVERVRFRKKYQYGERCQLGLELEETAEVESFRGGVVGEV 454

The following BLAST results are available for this feature:

BLAST of Gvermi8150.t1 vs. uniprot

BLAST of Gvermi8150.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ISX8_9FLOR	1.370e-118	45.59	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 29..51
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 384..465
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 138..363
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 52..62
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 63..84
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 364..383
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 85..115
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..28
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 116..137
None	No IPR available	TMHMM	TMhelix		coord: 116..138
None	No IPR available	TMHMM	TMhelix		coord: 63..85
None	No IPR available	TMHMM	TMhelix		coord: 364..383
None	No IPR available	TMHMM	TMhelix		coord: 21..43

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24226	contig	ScGOVlb_24226:1280805..1282202 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi8150.t1	Gvermi8150.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24226 1280805..1282202 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi8150.t1 ID=Gvermi8150.t1|Name=Gvermi8150.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=466bp
MIRNNKLSYLTAQLPWYSFEIVRTSTSSLVTSVLITLVSYQTAAIVSDVV
LGFKKRHEAKLKYFAMIILTRYLSSPLSVLNSILRKDWLTRLYYNGEIPR
DTAISRDPEPIKIKTVLTMLVLLTVTPLIDVVLLALAMSRTHVLDFDEAG
FGAVSLGASERSNALETTPYLSHCRKAPFEKRSSDNLDVSFLLCETPLLP
EAEDINVTGVEIVIVDGYMISTRVILQGIAVLATKSARMQTIEGNYVVKA
TMGKSSSGLLVQTALEQFSGYCGATNITGTVPPKRSDQFTTQIQLLESVA
ISCNILSKDSTERIEVLGKITSALRERVTLVRSDMMLVRKESDVHGAFSE
ERSIMLLHRTQKNASLFALIISVVLLLSLRFIVRMTIASDVEEGLLGCIR
DQLPESSVASSLKAGEQRISFRRKYQVGDHGYYGMMQKQLPEVERFEKAI
VGAVDVLEPNEPDVC*