Gvermi7966.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7966.t1
Unique NameGvermi7966.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length233
Homology
BLAST of Gvermi7966.t1 vs. uniprot
Match: A0A2V3IGQ1_9FLOR (Nuclear transcription factor Y subunit C-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGQ1_9FLOR)

HSP 1 Score: 383 bits (983), Expect = 3.180e-132
Identity = 202/234 (86.32%), Postives = 213/234 (91.03%), Query Frame = 0
Query:    1 MQHQTRQAQLQQQQSLQELNAKLSHFWAEQMSEVQAATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDPKKDDRAAAGAVDPAQLQ--YYSMPNMAPPPYPIPAQMAGATDTSAAMIYQPGAPPVYASAGYAAGMPYQPGMVNPQYMRMPQQVVYAPPGYQPGYIAGGATTQEQPPQS 232
            MQHQTRQAQLQQQQSL ELN+KL+HFW EQMSEVQAATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDPKKDDR A+GAVD AQ+   Y +MPN+  P Y IP Q+ GATD+SAAMIYQP AP  Y SAGYAAG+PYQPG+V+PQYMRMPQQVVYAPPGYQPGYIAG   TQEQPPQS
Sbjct:   62 MQHQTRQAQLQQQQSLHELNSKLAHFWNEQMSEVQAATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDPKKDDRPASGAVDAAQIPPYYANMPNIPSPAYTIPPQIPGATDSSAAMIYQPSAPQGYVSAGYAAGIPYQPGIVSPQYMRMPQQVVYAPPGYQPGYIAGSTGTQEQPPQS 295          
BLAST of Gvermi7966.t1 vs. uniprot
Match: R7QN00_CHOCR (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN00_CHOCR)

HSP 1 Score: 323 bits (829), Expect = 4.600e-108
Identity = 185/236 (78.39%), Postives = 196/236 (83.05%), Query Frame = 0
Query:    1 MQHQTRQAQLQQQQSLQELNAKLSHFWAEQMSEVQAATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDPKKDD-RAAAGAVDPAQLQYYSMPNMAPPPYPIPAQM-AGATDTSAAMIYQPGAPPVYASAGYAAGMPYQPGMVNPQYMRMPQQVVYAPPG-YQPGYIAGG-ATTQEQPPQS 232
            MQ QTRQAQLQQQ +LQEL AKLS FW EQM+EVQ ATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDPKKDD R   GAVD  Q+ YY+M NM  P Y +P Q+   ATDTSAAM+Y   A  VYASAGYA  + YQPGMVNPQYMRM Q V+YA PG Y   Y+AGG A  Q+QPPQS
Sbjct:  113 MQQQTRQAQLQQQHNLQELTAKLSQFWLEQMTEVQQATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDPKKDDVRPVTGAVDQTQMPYYTMANM--PAYGMPPQVNPAATDTSAAMMYSHNAQGVYASAGYANNIAYQPGMVNPQYMRMQQPVMYATPGAYGAQYLAGGTAQDQQQPPQS 346          
BLAST of Gvermi7966.t1 vs. uniprot
Match: A0A1X6NZD9_PORUM (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZD9_PORUM)

HSP 1 Score: 201 bits (511), Expect = 8.900e-60
Identity = 113/154 (73.38%), Postives = 121/154 (78.57%), Query Frame = 0
Query:   13 QQSLQELNAKLSHFWAEQMSEVQAATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDPKKDDRAAA----GAVDPAQLQ--------YYSMPNMAPPPY 154
            QQ  Q L+A+L+ FW EQ +EV+ ATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELT RAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRD+PKK+  A      GAV    +         YY MPN   PPY
Sbjct:   83 QQGAQVLDAQLTTFWTEQQTEVEQATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTLRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDEPKKEVGAPVAGFPGAVPGGVMPPGGTPVGGYYGMPNAGMPPY 236          
BLAST of Gvermi7966.t1 vs. uniprot
Match: M2XUB9_GALSU (Nuclear transcription factor Y, gamma n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XUB9_GALSU)

HSP 1 Score: 193 bits (491), Expect = 3.140e-58
Identity = 102/123 (82.93%), Postives = 110/123 (89.43%), Query Frame = 0
Query:    4 QTRQAQLQQQQSLQELNAKLSHFWAEQMSEVQAATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDPK 126
            Q RQ QLQQQ+SLQ LNA L+ FW EQM EV   TDFKNH+LPLARIKKIMKSDEDVRMISAEAP LF+KACEMFILELT RAWAQTEE+KRRTLQR DI++AIQKTDIFDFLIDIVPR+DPK
Sbjct:   34 QFRQQQLQQQRSLQALNATLAQFWDEQMREVSVITDFKNHMLPLARIKKIMKSDEDVRMISAEAPALFSKACEMFILELTIRAWAQTEESKRRTLQRCDIASAIQKTDIFDFLIDIVPREDPK 156          
BLAST of Gvermi7966.t1 vs. uniprot
Match: A0A5J4YT50_PORPP (Nuclear transcription factor Y subunit C-9 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT50_PORPP)

HSP 1 Score: 184 bits (467), Expect = 2.730e-54
Identity = 107/159 (67.30%), Postives = 118/159 (74.21%), Query Frame = 0
Query:    9 QLQQQQSLQELNAKLSHFWAEQMSEVQAATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDP----KKDDRA-----AAGAVDPAQLQYYSMPNMAPPPYPIPA 158
            QL  QQS+Q L  +L  FW +Q  E    TD KNH LPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFI+ELT RAWAQTEEAKRRTLQRSDI+ AIQKTDIFDFLIDIVPR+D     KK++ A     AAG  +   +QYYSM   A  P  +PA
Sbjct:   25 QLHMQQSMQNLEIELKKFWDQQRDEAALVTDVKNHTLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFIVELTLRAWAQTEEAKRRTLQRSDIALAIQKTDIFDFLIDIVPREDAAGTVKKEESARLSTGAAGDANAHNVQYYSMQQHAGMPSHMPA 183          
BLAST of Gvermi7966.t1 vs. uniprot
Match: A0A7S0G4M5_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G4M5_9RHOD)

HSP 1 Score: 175 bits (443), Expect = 1.280e-51
Identity = 100/154 (64.94%), Postives = 113/154 (73.38%), Query Frame = 0
Query:    9 QLQQQQSLQELNAKLSHFWAEQMSEVQAATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDPKKDD-RAAAGAVDPAQLQYYSMPNMAPP-PYPIPAQM 160
            Q+ QQQS   +  +L  FW  Q  EV    DFK   LPLARIKKIMKSDEDV+MISAEAPVLFAKACEMFI ELT R+WAQTE+AKRRTLQRSD+S AIQKTDIFDFLIDIVPR++PK+D+       VD A + YY M N  P  PY +P  M
Sbjct:   29 QMHQQQSGGGVMDQLQEFWGRQRQEVAKTADFKVQQLPLARIKKIMKSDEDVKMISAEAPVLFAKACEMFIQELTIRSWAQTEDAKRRTLQRSDVSGAIQKTDIFDFLIDIVPRNEPKEDEAHRPVTNVDGAPMPYYQMGNQVPTVPYVMPQPM 182          
BLAST of Gvermi7966.t1 vs. uniprot
Match: A0A090N4A5_OSTTA (Transcriptional activator NFYC/HAP5 subunit n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N4A5_OSTTA)

HSP 1 Score: 176 bits (445), Expect = 2.790e-51
Identity = 102/170 (60.00%), Postives = 113/170 (66.47%), Query Frame = 0
Query:   21 AKLSHFWAEQMSEVQAATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDPKKDDRAAAGAVDPAQLQYYSMPNMAPPPYPIPAQMAGATDTSAAMIYQPGAPPVYASAGYAAGMP 190
            AKL  FW EQM E+QA  DFKNHLLPLARIKKIMKSDEDVRMIS+EAPVLFAKACEMF+LELT RAWA  +E KRRTLQR DI+AAI KTDIFDFLIDIVPRD+      A  G  D  + +  S P +   P   P Q+  +          PG P   A  GYA   P
Sbjct:   72 AKLREFWREQMMEIQATHDFKNHLLPLARIKKIMKSDEDVRMISSEAPVLFAKACEMFVLELTMRAWAHAQENKRRTLQRGDIAAAITKTDIFDFLIDIVPRDE------AGEGGGDDGENEGPSAPQLGALPIFPPQQLVSSI---------PGVPGTSARPGYAFDFP 226          
BLAST of Gvermi7966.t1 vs. uniprot
Match: K7V395_MAIZE (CCAAT-HAP5 transcription factor n=3 Tax=Zea mays TaxID=4577 RepID=K7V395_MAIZE)

HSP 1 Score: 174 bits (440), Expect = 3.870e-51
Identity = 88/137 (64.23%), Postives = 105/137 (76.64%), Query Frame = 0
Query:   21 AKLSHFWAEQMSEVQAATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDPKKDDRAAAG-------------AVDPAQLQYY 144
            A+L  FWAEQ  E++A TDFKNH LPLARIKKIMK+DEDVRMI+AEAPV+FA+ACEMFILELTHR WA  EE KRRTLQ+SDI+AA+ +T++FDFL+DIVPRD+P+  D AAA              A DP  + YY
Sbjct:   61 AQLQLFWAEQYREIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAVARTEVFDFLVDIVPRDEPRDADPAAAAMGAAAPGIPQHPAAADPTTMGYY 197          
BLAST of Gvermi7966.t1 vs. uniprot
Match: A0A3B6KHJ2_WHEAT (CBFD_NFYB_HMF domain-containing protein n=25 Tax=Poaceae TaxID=4479 RepID=A0A3B6KHJ2_WHEAT)

HSP 1 Score: 172 bits (436), Expect = 1.600e-50
Identity = 94/153 (61.44%), Postives = 109/153 (71.24%), Query Frame = 0
Query:   22 KLSHFWAEQMSEVQAATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDPKKDDRAAAGAVDPAQLQYYSMPNMAPPPYPIPAQMAGATDTSAAMIYQP 174
            +L  FWAEQ  E++A TDFKNH LPLARIKKIMK+DEDVRMI+AEAPV+FA+ACEMFILELTHR WA  EE KRRTLQ+SDI+AAI +T++FDFL+DIVPRDD K  + AAA A+                  P PA    ATD S A  Y P
Sbjct:   60 QLQVFWAEQYREIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIVPRDDAKDAEAAAAAAMXXXXXGI-----------PRPAAGVPATDPSMAYYYVP 201          
BLAST of Gvermi7966.t1 vs. uniprot
Match: A0A0P0XN89_ORYSJ (Os09g0480700 protein (Fragment) n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A0P0XN89_ORYSJ)

HSP 1 Score: 171 bits (432), Expect = 2.180e-50
Identity = 91/137 (66.42%), Postives = 105/137 (76.64%), Query Frame = 0
Query:   22 KLSHFWAEQMSEVQAATDFKNHLLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQRSDISAAIQKTDIFDFLIDIVPRDDPKKDDRAA----AGAVDPAQ-------LQYYSMP 147
            +L  FWAEQ  E++A TDFKNH LPLARIKKIMK+DEDVRMI+AEAPV+FA+ACEMFILELTHR WA  EE KRRTLQ+SDI+AAI +T++FDFL+DIVPRDD K  D AA    AG   PA        L YY +P
Sbjct:   30 QLQMFWAEQYREIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIVPRDDAKDADAAAXXXXAGIPRPAAGVPATDPLAYYYVP 166          
The following BLAST results are available for this feature:
BLAST of Gvermi7966.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGQ1_9FLOR3.180e-13286.32Nuclear transcription factor Y subunit C-2 n=1 Tax... [more]
R7QN00_CHOCR4.600e-10878.39CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ch... [more]
A0A1X6NZD9_PORUM8.900e-6073.38CBFD_NFYB_HMF domain-containing protein n=1 Tax=Po... [more]
M2XUB9_GALSU3.140e-5882.93Nuclear transcription factor Y, gamma n=1 Tax=Gald... [more]
A0A5J4YT50_PORPP2.730e-5467.30Nuclear transcription factor Y subunit C-9 n=1 Tax... [more]
A0A7S0G4M5_9RHOD1.280e-5164.94Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A090N4A5_OSTTA2.790e-5160.00Transcriptional activator NFYC/HAP5 subunit n=1 Ta... [more]
K7V395_MAIZE3.870e-5164.23CCAAT-HAP5 transcription factor n=3 Tax=Zea mays T... [more]
A0A3B6KHJ2_WHEAT1.600e-5061.44CBFD_NFYB_HMF domain-containing protein n=25 Tax=P... [more]
A0A0P0XN89_ORYSJ2.180e-5066.42Os09g0480700 protein (Fragment) n=2 Tax=Oryza sati... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 45..107
e-value: 4.2E-20
score: 71.8
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 5..122
e-value: 4.4E-45
score: 154.7
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 18..116
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 5..176
IPR027170Transcriptional activator HAP5 subunitPANTHERPTHR10252:SF8NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMAcoord: 5..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:335516..336214 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7966.t1Gvermi7966.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 335516..336214 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7966.t1 ID=Gvermi7966.t1|Name=Gvermi7966.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=233bp
MQHQTRQAQLQQQQSLQELNAKLSHFWAEQMSEVQAATDFKNHLLPLARI
KKIMKSDEDVRMISAEAPVLFAKACEMFILELTHRAWAQTEEAKRRTLQR
SDISAAIQKTDIFDFLIDIVPRDDPKKDDRAAAGAVDPAQLQYYSMPNMA
PPPYPIPAQMAGATDTSAAMIYQPGAPPVYASAGYAAGMPYQPGMVNPQY
MRMPQQVVYAPPGYQPGYIAGGATTQEQPPQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold
IPR027170HAP5_su