Gvermi8020.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8020.t1
Unique NameGvermi8020.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length506
Homology
BLAST of Gvermi8020.t1 vs. uniprot
Match: A0A2V3J2B0_9FLOR (tRNA pseudouridine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2B0_9FLOR)

HSP 1 Score: 665 bits (1717), Expect = 3.560e-236
Identity = 328/489 (67.08%), Postives = 394/489 (80.57%), Query Frame = 0
Query:    1 MPPPRNPSEKELRAMSREQLLSLALTNLFPNSSVTEQVGKVS--RSSPGPLDGEPPRKKPRQFDMTRYGQRLVALRIMYTGWLFHGFASQIDSDNTVEAHLFSSLLKTRLISSRLDCRYSRAGRTDVGVSAACQVIGICLRSNVKPPSTGHRELDYVKIINGTLPQGIRCTGWTPVSDGASPFPQVYDGDPLPIQKYWTAVKQGQIEETVPIRRPGQPFSARFDASYRSYKYFFPRGDLNIDAMREGASFFEGTHDFRNFCRIDENVTNFERHMFSVQVRRMHDDALVLDGKDDEYTIYFIFVKGQAFLWHQVRCMTAVLFDIGMGNEQPDLIKRMLADAKTCSGQFSNGRPQYKMASPVPLLLYECTYPRTVLHFPQTFERNFHPAVASSVDLRRSSFERANSAIAKNFAAEAAKMSILQTVLKDQDELVSYIPENETGHASKSFKELRGPRNFVIDHMHRRHIPYEERLTDDSLKMKQKKAALKLKS 487
            MP    P+EKELR+MSRE+LLSLALT+L     V+++   V    S+    +GEPPRKKPR FDM+RYGQR +ALR+MYTGW FHGFA+Q DSDNTVEAHLFS+LLK RLISSR  C YSRAGRTDVGVSA+ QVIG+ +RSNVKPPSTGHRELDYVK++NG LPQGIRCT WTPV DGASP+P +YDGDP PI+ YW +V  G ++E   IRRPGQ FSARFDA+YRSYKYFF  G L+I AMR+GA +FEGTHDFRNFCRIDEN+TNFERHM++VQ+RR+ DD++  D  DDEYT+Y+IFVKGQAFLWHQVRCM AVLFD+GM  E P++IK++L DA+  +G FS GRPQYKMA P PLLLYEC YP+TVL+FPQ+FER F P +  S D RRSSFERAN +IAK+FA ++AKMSILQT+LKDQD+L+SY    +   + KSF +LR PR+F+ D    RHIPYE+R TDD +++KQ KA LK K+
Sbjct:    1 MPTNTKPTEKELRSMSREELLSLALTHLSSEPEVSKKADDVEVLLSNVKRSNGEPPRKKPRHFDMSRYGQRHIALRLMYTGWRFHGFAAQADSDNTVEAHLFSALLKVRLISSRTGCDYSRAGRTDVGVSASNQVIGLRVRSNVKPPSTGHRELDYVKVLNGVLPQGIRCTAWTPVCDGASPYPALYDGDPDPIKDYWNSVINGSVKEYGNIRRPGQKFSARFDAAYRSYKYFFVCGALDIKAMRKGARYFEGTHDFRNFCRIDENITNFERHMYTVQIRRLKDDSVQDDDGDDEYTMYYIFVKGQAFLWHQVRCMAAVLFDVGMLCEDPEVIKQLLEDAEVKNGVFSKGRPQYKMAPPTPLLLYECEYPKTVLYFPQSFEREFSPPITDSKDPRRSSFERANLSIAKDFAEQSAKMSILQTILKDQDKLISYSASIDALASRKSFMQLRKPRDFISDLNPGRHIPYEKRPTDDPIEIKQMKAGLKKKN 489          
BLAST of Gvermi8020.t1 vs. uniprot
Match: R7QCV9_CHOCR (PseudoU_synth_1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCV9_CHOCR)

HSP 1 Score: 501 bits (1289), Expect = 8.010e-171
Identity = 260/509 (51.08%), Postives = 346/509 (67.98%), Query Frame = 0
Query:    8 SEKELRAMSREQLLSLALTNLFPNSSVTEQVGKVSRSSPGPLDGEPPRKKP----------------RQFDMTRYGQRLVALRIMYTGWLFHGFASQIDSDNTVEAHLFSSLLKTRLISSRLDCRYSRAGRTDVGVSAACQVIGICLRSNVKPPSTGHRELDYVKIINGTLPQGIRCTGWTPVSDGASPFPQVYDGDPLPIQKYWTAVKQGQIE-ETVPIRRPGQPFSARFDASYRSYKYFFPRGDLNIDAMREGASFFEGTHDFRNFCRIDENVTNFERHMFSVQVRRMHDDALVLDGKDD---EYTIYFIFVKGQAFLWHQVRCMTAVLFDIGMGNEQPDLIKRMLADAKTCSGQFSNGRPQYKMASPVPLLLYECTYPRTVLHFPQTFERNFHPAVASSVD---LRRSSFERANSAIAKNFAAEAAKMSILQTVLKDQDELVSYIPENETGHAS-KSFKELRGPRNFVIDHMHRRHIPYEERLTDDSLKMKQKKAALKLKSRNRLH 492
            SE+ELR++S +QLL+  LT++            +S ++P     +PP                    ++FDM+RYGQRLVAL ++Y GW FHGF++Q DS NT+E H+F++L KTRLI SR  C YSR+GRTDVGVSA  QVIGI LRSNV PPSTG +ELDY+KI+NG LPQGIR   WTPV DG +P P+ YDGDP PI  YW AVK+G+++ +   +RRP Q FSARFDA++RSYKYFF RG L+I AM+  A  FEGTHDFRNFCRIDEN+TNFER M++V +   +D   +     D   E  + +IFV+GQAFLWHQVRCM AVLFDIGM  E P L+KRML D K  +G F+NG+PQY+MASP PLLLY C YP +V+ FPQ+FE    P  A   +   ++R+SF +A++++A+++A+ A K ++L+++L + D  VS    + T + S K FK  R  R+FV+D     H+PY +R  DDSL +KQ++AA K +++   H
Sbjct:   23 SERELRSLSHQQLLAYTLTHV-----------PISATAPPKSSPQPPXXXXXXXXXXXXXXXXXXXXKEFDMSRYGQRLVALHLVYIGWNFHGFSAQADSKNTIEHHIFAALTKTRLIESRATCEYSRSGRTDVGVSALGQVIGIRLRSNVAPPSTGEKELDYIKILNGNLPQGIRVLAWTPVPDGLTPVPKTYDGDPSPIVGYWKAVKEGKLDIDQSNVRRPSQAFSARFDATHRSYKYFFVRGGLDIMAMKTAAKHFEGTHDFRNFCRIDENITNFERQMYTVDIHSANDQTPITPSVADNLRENDMCYIFVQGQAFLWHQVRCMAAVLFDIGMRREDPVLVKRMLDDVKMGTGAFANGKPQYRMASPTPLLLYACAYPASVVAFPQSFEAGQAPGHAKKSNNQVIQRNSFAKADASLAQSYASVATKAAVLESMLAENDRFVSADGHSSTWNDSGKPFKAYRAARSFVLDLKVGNHVPYSQRPCDDSLFVKQQRAARKKEAKPTNH 520          
BLAST of Gvermi8020.t1 vs. uniprot
Match: UPI0014552972 (tRNA pseudouridine(38/39) synthase-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014552972)

HSP 1 Score: 245 bits (626), Expect = 3.960e-72
Identity = 152/377 (40.32%), Postives = 203/377 (53.85%), Query Frame = 0
Query:    8 SEKELRAMSREQLLSLALTNLFPNSSVTEQVGKVSRSSPGPLDGEPPRKKPRQFDMTRYGQRLVALRIMYTGWLFHGFASQIDSDNTVEAHLFSSLLKTRLISSRLDCRYSRAGRTDVGVSAACQVIGICLRSNVKPPS-------------TGHRE--LDYVKIINGTLPQGIRCTGWTPVSDGASPFPQVYDGDPLPIQKYWTAVKQGQIEETVPIRRPGQPFSARFDASYRSYKYFFPRGDLNIDAMREGASFFEGTHDFRNFCRID--ENVTNFERHMFSVQVRRMHDDALVLDGKDDEYTIYFIFVKGQAFLWHQVRCMTAVLFDIGMGNEQPDLIKRMLADAKTCSGQFSNGRPQYKMASPVPLLLYECTY 367
            S +EL  M ++  L   +++L  +  + E+      S+   L     ++  R FD ++Y +R VALRI Y GW + GFASQ +++NTVEA +F +L KTRLI +R    YSR GRTD GVSA  QVI I LRSN+   S             +G++E  ++Y  I+N  LP+ IRC  WTPV             DP                           F ARF A YR+YKYF PRGD +I+ MR  A  + G HDFRNFC++D    V NF R + S+ ++        LD +DD Y +Y + V GQAFL+HQVRCM A+L  IG   EQP++I R+L D KT        +PQY MAS  PL+LY+C Y
Sbjct:   19 SREELLVMIQQ--LKTEVSSLRQSQQLEEEKNADGGSTKESLGKYKKKRTQRPFDFSKYNKRHVALRIAYLGWDYQGFASQENTENTVEAEIFQALTKTRLIKNRETANYSRCGRTDKGVSAFGQVISIDLRSNLLEGSGVIQTIDGTAQERSGNKEVEIEYTHILNRVLPETIRCIAWTPV-------------DPK--------------------------FDARFSALYRTYKYFIPRGDSDIELMRNSAQKYVGDHDFRNFCKMDVGNGVVNFWRTILSIDIQE-------LDSRDDGYQMYELTVTGQAFLYHQVRCMVAILLLIGQHKEQPEIIDRLL-DVKT-----QPCKPQYSMASEYPLVLYDCAY 341          
BLAST of Gvermi8020.t1 vs. uniprot
Match: UPI001068DAAE (tRNA pseudouridine(38/39) synthase-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001068DAAE)

HSP 1 Score: 239 bits (611), Expect = 5.220e-70
Identity = 145/394 (36.80%), Postives = 200/394 (50.76%), Query Frame = 0
Query:    5 RNPSEKELRAMSREQLLSLALTNLFPNSSVTEQVGKVSRSSPG----------PLDGEPPRKKPRQFDMTRYGQRLVALRIMYTGWLFHGFASQIDSDNTVEAHLFSSLLKTRLISSRLDCRYSRAGRTDVGVSAACQVIGICLRSNV---------KPPSTGH----------RELDYVKIINGTLPQGIRCTGWTPVSDGASPFPQVYDGDPLPIQKYWTAVKQGQIEETVPIRRPGQPFSARFDASYRSYKYFFPRGDLNIDAMREGASFFEGTHDFRNFCRID--ENVTNFERHMFSVQVRRMHDDALVLDGKDDEYTIYFIFVKGQAFLWHQVRCMTAVLFDIGMGNEQPDLIKRMLADAKTCSGQFSNGRPQYKMASPVPLLLYECTY 367
            R   + +  ++ RE+LL+        N  + EQ+ +V ++               + EP  KK + FD +RY  R VAL+I Y GW +HGFASQ +++NT+E HLF++L K  LI  R  C YSR GRTD GVSA  QVI + +RSN+         K  +T             E++YV ++N  LP  IR   W PV+                                         F ARF   YR YKY+FP GD +I+ M +    F G HDFRNFC++D   NVT+F R++ SV V+RM++ +        EY +  + VKG AFLWHQ+RCM A+LF +G   E+P++I  ML D   C       RPQY MAS +PL+L+ C Y
Sbjct:    6 RKREDDQSNSVEREELLARLTELENRNRDLEEQLSRVQQNQSSISSQSINKKQKNEKEPKLKKRKVFDFSRYNVRYVALKIAYLGWDYHGFASQENNENTIEGHLFNALQKACLIKDRSTCNYSRCGRTDKGVSAFAQVISLEIRSNLDEGDGVIQKKESNTQQDNSTNKNSFKEEINYVYVLNKLLPDEIRVLAWIPVA---------------------------------------LDFKARFSCVYRMYKYYFPAGDFDIELMNKAGKRFIGEHDFRNFCKMDVANNVTSFRRNILSVDVQRMNNCS------QSEYDMCVVTVKGMAFLWHQIRCMVAILFLVGQNLEKPEIIDHML-DITKCPR-----RPQYSMASEIPLVLFHCEY 348          
BLAST of Gvermi8020.t1 vs. uniprot
Match: A0A8B7ZXT4_ACAPL (tRNA pseudouridine(38/39) synthase-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZXT4_ACAPL)

HSP 1 Score: 239 bits (609), Expect = 1.520e-69
Identity = 153/384 (39.84%), Postives = 196/384 (51.04%), Query Frame = 0
Query:   11 ELRAMSREQLLSLALTNLFPNSSVTEQVGKVSRSSPGPLDGEPP---------RKKPRQFDMTRYGQRLVALRIMYTGWLFHGFASQIDSDNTVEAHLFSSLLKTRLISSRLDCRYSRAGRTDVGVSAACQVIGICLRSNV---------------KPPSTGHRELDYVKIINGTLPQGIRCTGWTPVSDGASPFPQVYDGDPLPIQKYWTAVKQGQIEETVPIRRPGQPFSARFDASYRSYKYFFPRGDLNIDAMREGASFFEGTHDFRNFCRID--ENVTNFERHMFSVQVRRMHDDALVLDGKDDEYTIYFIFVKGQAFLWHQVRCMTAVLFDIGMGNEQPDLIKRML-ADAKTCSGQFSNGRPQYKMASPVPLLLYECTY 367
            E R  SRE+LL++ +  L   S V       S+ + G  DG+           ++  R FD ++Y  R VALRI Y GW + GFASQ ++D T+EA LF +L KTRLI SR    YSR GRTD GVSA  QVI I LRSN+               + P    +E++Y  I+N  LP+ IRC  WTPV  G                                       F ARF   +R+YKYFFPRGDL+I  M+E A    G HDFRNFC++D    V NF R + S+       D   LD  +  Y +Y + V GQAFL+HQVRCM A+LF IG   E  ++I R L   A+ C       +PQY MAS  PL+LY+C+Y
Sbjct:   21 EFRGNSREELLAV-IQQL--RSEVAALRSTQSKDATGSEDGQSSELATRRNKKQRIQRPFDFSKYNTRHVALRIAYLGWDYQGFASQENTDKTIEAELFEALTKTRLIQSRDTANYSRCGRTDKGVSAFGQVISIDLRSNLLEGLGVIQTPGGKACERPGDKTKEIEYTHILNRVLPETIRCLAWTPVDPG---------------------------------------FDARFSTLHRTYKYFFPRGDLDIQVMQEAAQKLVGDHDFRNFCKMDVGNGVVNFCRTIISI-------DIAPLDDSEAGYQMYELTVTGQAFLYHQVRCMVAILFLIGQHKENSEIIDRFLDIKAQPC-------KPQYSMASEYPLVLYDCSY 348          
BLAST of Gvermi8020.t1 vs. uniprot
Match: A0A7D9IHD2_PARCT (tRNA pseudouridine(38 39) synthase-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IHD2_PARCT)

HSP 1 Score: 236 bits (602), Expect = 9.190e-69
Identity = 150/383 (39.16%), Postives = 196/383 (51.17%), Query Frame = 0
Query:   10 KELRAMSREQLLSLALTNLFPNS-------SVTEQVGKVSRSSPGPLDGEPPRKKPRQFDMTRYGQRLVALRIMYTGWLFHGFASQIDSDNTVEAHLFSSLLKTRLISSRLDCRYSRAGRTDVGVSAACQVIGICLRSNV---------KPPST-------GHRELDYVKIINGTLPQGIRCTGWTPVSDGASPFPQVYDGDPLPIQKYWTAVKQGQIEETVPIRRPGQPFSARFDASYRSYKYFFPRGDLNIDAMREGASFFEGTHDFRNFCRID--ENVTNFERHMFSVQVRRMHDDALVLDGKDDEYTIYFIFVKGQAFLWHQVRCMTAVLFDIGMGNEQPDLIKRMLADAKTCSGQFSNGRPQYKMASPVPLLLYECTY 367
            K  R  SRE+LL + LT L   +       S  E     S +       EP  KK + FD +RY  R +AL+I Y GW +HGFASQ + +NT+EAH F++L K  LI  R  C YSR GRTD GVSA  QVI + +RSN+         K  ST          EL+YV +IN  LP  IR   W PV+                                         F ARF   YR YKY+FP  + +I+ M E    F G HDFRNFC++D   NVT+F R++ SV V+R+++ +      ++EY +  + V+G AFLWHQVRCM A+LF IG   E+P++I  ML   K C       RPQY MAS +PL+L+ C Y
Sbjct:    6 KRKRDDSREELL-VRLTELENQNRELKERLSTFETPSSQSVNKKAKKSNEPKLKKRKAFDFSRYNVRHIALKIAYLGWDYHGFASQENIENTIEAHFFNALQKACLIKDRTTCNYSRCGRTDKGVSALAQVISLEVRSNLDEGCGVIQNKELSTHDNTVNKNEEELNYVHVINKLLPDEIRVLAWAPVA---------------------------------------LDFKARFSCLYRMYKYYFPAANFDIERMNEAGKKFIGEHDFRNFCKMDVGNNVTSFCRNILSVDVQRLNNSS------ENEYEMCVMTVRGMAFLWHQVRCMVAILFLIGENLEEPEIIDHMLNITK-CPR-----RPQYNMASEIPLVLFHCEY 336          
BLAST of Gvermi8020.t1 vs. uniprot
Match: B0XGH8_CULQU (Pseudouridylate synthase n=13 Tax=Culex TaxID=53527 RepID=B0XGH8_CULQU)

HSP 1 Score: 235 bits (599), Expect = 4.850e-68
Identity = 136/383 (35.51%), Postives = 200/383 (52.22%), Query Frame = 0
Query:    8 SEKELRAMSREQLLSLALTNLFPNSSVTEQVGKVSRSSPGPLDGEP--PRKKPRQFDMTRYGQRLVALRIMYTGWLFHGFASQIDSDNTVEAHLFSSLLKTRLISSRLDCRYSRAGRTDVGVSAACQVIGICLRSNVKP-----PSTGHRELDYVKIINGTLPQGIRCTGWTPVSDGASPFPQVYDGDPLPIQKYWTAVKQGQIEETVPIRRPGQPFSARFDASYRSYKYFFPRGDLNIDAMREGASFFEGTHDFRNFCRID--ENVTNFERHMFSVQVRRMHDDALVLDGKDDEYTIYFIFVKGQAFLWHQVRCMTAVLFDIGMGNEQPDLIKRMLADAKTCSGQFSNGRPQYKMASPVPLLLYECTYPRTVLHFPQTFERN 381
            + +EL  +S+EQL+      +    S   Q+  + + + G    +P    K  R+FD ++  +R + LR  Y GW F G+A+Q DS NT+E HLF++L +  LI SR    Y R GRTD GVSA  QV+ + +RS   P     P +   EL+Y +++N  LP  IRC  W P ++                                        +SARFD   R+Y+YFFPRG L++DAMR+G  F  G+HDFRN C++D    V  F+R++    +R    D+L  DG D  Y + +  ++G+AFLWHQVRC+ A+L  +G G E P +I+ +L   K      +  +PQY +A+ VPL LYEC Y       P+ F++N
Sbjct:   15 TREELEELSKEQLMD----RIIQLESQNFQLKNIIQKATGTKSDQPRSSNKNQRKFDFSKCHKRHILLRFFYLGWDFQGYATQEDSANTIEHHLFNALTRVCLIESRESSNYHRCGRTDKGVSAFHQVVSLDVRSKFPPESQLAPESLQNELNYCQLLNRVLPAEIRCVAWMPTAN--------------------------------------PNYSARFDCRSRTYRYFFPRGSLDVDAMRKGCEFLVGSHDFRNLCKMDVGNGVVTFQRNVHYAVIR----DSLK-DGGDSSYDMLYFELRGKAFLWHQVRCIMAILILVGQGREDPTVIRELLDVEK------NPRKPQYSLANDVPLNLYECLYKSKGSFDPKVFDKN 344          
BLAST of Gvermi8020.t1 vs. uniprot
Match: A0A077WKK8_9FUNG (PseudoU_synth_1 domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WKK8_9FUNG)

HSP 1 Score: 234 bits (598), Expect = 5.000e-68
Identity = 133/323 (41.18%), Postives = 187/323 (57.89%), Query Frame = 0
Query:   49 LDGEPPRKKPRQFDMTRYGQRLVALRIMYTGWLFHGFASQIDSDN--TVEAHLFSSLLKTRLISSRLDCRYSRAGRTDVGVSAACQVIGICLRSNVKPPSTGHRELDYVKIINGTLPQGIRCTGWTPVSDGASPFPQVYDGDPLPIQKYWTAVKQGQIEETVPIRRPGQPFSARFDASYRSYKYFFPRGDLNIDAMREGASFFEGTHDFRNFCRID--ENVTNFERHMFSVQVRRMHDDALVLDGKDDEYTIYFIFVKGQAFLWHQVRCMTAVLFDIGMGNEQPDLIKRMLADAKTCSGQFSNGRPQYKMASPVPLLLYECTY 367
            +DG+P RK+ R FDM++Y QR +AL++ Y GW + GFA+Q + +   TVE  LF +L   RLI     C++SR GRTD GVS   QV+ + +RSN+ P  T   E+ YV+ IN  LP  IR   W PVSD                                        F++RFD   R+YKYFFPRG L++D MR+GAS+F G HDFRNFC++D  +N+TN++R + S+ +R +   AL   G  D    + + +KG AFLWHQVRC+ ++LF +G   E+P++I+ +L  +K  S      RP Y MAS +PLLLY+C +
Sbjct:   44 IDGKP-RKEQRPFDMSKYSQRHIALKVAYLGWNYMGFAAQGNEEAVPTVEGRLFQALQNCRLIVDPDQCQFSRCGRTDKGVSGLGQVVSLRVRSNL-PQKT--EEIPYVETINRLLPDDIRILAWAPVSD---------------------------------------TFNSRFDCRSRTYKYFFPRGKLDLDLMRQGASYFIGEHDFRNFCKLDPSKNITNYKRTVLSLDIRPVAPPAL---GASDSTGFFEVELKGTAFLWHQVRCIMSILFLVGQKLERPEIIQDLLNVSKIES------RPDYPMASELPLLLYDCEF 314          
BLAST of Gvermi8020.t1 vs. uniprot
Match: A0A293MEK8_ORNER (tRNA pseudouridine synthase (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MEK8_ORNER)

HSP 1 Score: 234 bits (596), Expect = 6.000e-68
Identity = 139/374 (37.17%), Postives = 203/374 (54.28%), Query Frame = 0
Query:   11 ELRAMSREQLLSLALTNLFPNSSVTEQVGKVSRSSPGPLDGEPPRKKPRQFDMTRYGQRLVALRIMYTGWLFHGFASQIDSDNTVEAHLFSSLLKTRLISSRLDCRYSRAGRTDVGVSAACQVIGICLRSNVK------------PPSTGH---RELDYVKIINGTLPQGIRCTGWTPVSDGASPFPQVYDGDPLPIQKYWTAVKQGQIEETVPIRRPGQPFSARFDASYRSYKYFFPRGDLNIDAMREGASFFEGTHDFRNFCRID--ENVTNFERHMFSVQVRRMHDDALVLDGKDDEYTIYFIFVKGQAFLWHQVRCMTAVLFDIGMGNEQPDLIKRMLADAKTCSGQFSNGRPQYKMASPVPLLLYECTY 367
            ++  +SRE+L+   +      S V +    +S+ +  P+      ++ + F+  R+ +R VAL+ +Y GWL+ G+  Q D+ NTVEA LF +LL+T+L+ SR    Y R GRTD GVSA  Q I I LRSN+             P +      RE++YVKI+NG LPQ IR   W PV             DP                           FSARFD   R+Y+YFFP+G+L+++ MR+GA+   G HDFRN C++D    VTNF R++ S ++ ++ +     DG +  YT++ + + GQAFLWHQVRC+ AVLF IG   E+P +I  +L   K      +  +PQY MAS +PL+LY+C +
Sbjct:   14 DIENLSREELVRRIMQL---ESHVKQLQNVISKEAASPV------RQQKPFNFKRFKKRHVALKFLYLGWLYDGYVVQEDTANTVEAVLFEALLRTKLVESRETSNYHRCGRTDKGVSAFSQTISIDLRSNLSEGPGIITPENYTPDAKSESRTREIEYVKILNGVLPQEIRVLAWAPV-------------DPT--------------------------FSARFDCKQRTYRYFFPQGNLDLECMRQGAALLVGEHDFRNLCKMDVGNGVTNFVRNILSTRLYKLVNQEGSGDGGNRGYTMWCLEIVGQAFLWHQVRCIVAVLFLIGRRLEEPQIISDLLDVEK------NPRKPQYSMASEIPLVLYDCQF 333          
BLAST of Gvermi8020.t1 vs. uniprot
Match: A0A182YIY5_ANOST (tRNA pseudouridine synthase n=3 Tax=Neocellia TaxID=44535 RepID=A0A182YIY5_ANOST)

HSP 1 Score: 234 bits (597), Expect = 1.140e-67
Identity = 137/371 (36.93%), Postives = 197/371 (53.10%), Query Frame = 0
Query:    5 RNPSEKELRAMSREQLLSLALTNLFPNSSVTEQVGKVSRSSPGPLDGEPPRKKPRQFDMTRYGQRLVALRIMYTGWLFHGFASQIDSDNTVEAHLFSSLLKTRLISSRLDCRYSRAGRTDVGVSAACQVIGICLRSNVKPPSTGHR-----ELDYVKIINGTLPQGIRCTGWTPVSDGASPFPQVYDGDPLPIQKYWTAVKQGQIEETVPIRRPGQPFSARFDASYRSYKYFFPRGDLNIDAMREGASFFEGTHDFRNFCRID--ENVTNFERHMFSVQVRRMHDDALVLDGKDDEYTIYFIFVKGQAFLWHQVRCMTAVLFDIGMGNEQPDLIKRML-ADAKTCSGQFSNGRPQYKMASPVPLLLYECTY 367
            ++ +E EL+ +S+E+L++  +T L  +++  + + + S  S          KK R FD ++  +R + LR  Y GW + GFA+Q DS  T+E HLFS+L K  LI SR    Y+R GRTD GVSA  QVI + +RS  +P           ELDY  ++N  LP+ IRC  W P+ + A                                      +SARFD   R+Y+YFFPRGDLNI AM EG     GTHDFRN C++D    V NF R +  ++++  H D+      +  Y + ++ ++G+AFLWHQVRC+ AVL  +G   E+P ++K +L  +   C       +PQY MAS VPL LYEC +
Sbjct:   10 KSTTEDELQLLSKEELIA-KITQLEAHNAQLKSIVQKSLKSREETTQAKGTKKHRPFDFSKCFKRHILLRFYYLGWDYQGFAAQEDSIETIEHHLFSALKKVCLIESRETSNYNRCGRTDKGVSAFHQVISLNVRSKFRPEEQLAEGKLTAELDYCSMLNRVLPEDIRCLAWMPMVNPA--------------------------------------YSARFDCRSRTYRYFFPRGDLNISAMEEGMRHLVGTHDFRNLCKMDVGNGVVNFVRSIDEIRIKPSHSDSY----SEGSYDMMYVELRGKAFLWHQVRCIVAVLLLVGQRKEEPTVVKELLDVEKNPC-------KPQYSMASDVPLNLYECAF 330          
The following BLAST results are available for this feature:
BLAST of Gvermi8020.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2B0_9FLOR3.560e-23667.08tRNA pseudouridine synthase n=1 Tax=Gracilariopsis... [more]
R7QCV9_CHOCR8.010e-17151.08PseudoU_synth_1 domain-containing protein n=1 Tax=... [more]
UPI00145529723.960e-7240.32tRNA pseudouridine(38/39) synthase-like n=1 Tax=As... [more]
UPI001068DAAE5.220e-7036.80tRNA pseudouridine(38/39) synthase-like n=1 Tax=De... [more]
A0A8B7ZXT4_ACAPL1.520e-6939.84tRNA pseudouridine(38/39) synthase-like n=1 Tax=Ac... [more]
A0A7D9IHD2_PARCT9.190e-6939.16tRNA pseudouridine(38 39) synthase-like n=1 Tax=Pa... [more]
B0XGH8_CULQU4.850e-6835.51Pseudouridylate synthase n=13 Tax=Culex TaxID=5352... [more]
A0A077WKK8_9FUNG5.000e-6841.18PseudoU_synth_1 domain-containing protein n=1 Tax=... [more]
A0A293MEK8_ORNER6.000e-6837.17tRNA pseudouridine synthase (Fragment) n=1 Tax=Orn... [more]
A0A182YIY5_ANOST1.140e-6736.93tRNA pseudouridine synthase n=3 Tax=Neocellia TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 249..368
e-value: 1.8E-27
score: 95.9
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 224..431
e-value: 6.4E-38
score: 132.3
IPR020094Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalGENE3D3.30.70.580coord: 59..181
e-value: 3.2E-26
score: 93.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..60
NoneNo IPR availablePANTHERPTHR11142:SF5TRNA PSEUDOURIDINE(38/39) SYNTHASEcoord: 216..452
NoneNo IPR availablePANTHERPTHR11142:SF5TRNA PSEUDOURIDINE(38/39) SYNTHASEcoord: 42..176
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 42..176
coord: 216..452
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 68..177
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 211..375

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:674793..676310 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8020.t1Gvermi8020.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 674793..676310 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8020.t1 ID=Gvermi8020.t1|Name=Gvermi8020.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=506bp
MPPPRNPSEKELRAMSREQLLSLALTNLFPNSSVTEQVGKVSRSSPGPLD
GEPPRKKPRQFDMTRYGQRLVALRIMYTGWLFHGFASQIDSDNTVEAHLF
SSLLKTRLISSRLDCRYSRAGRTDVGVSAACQVIGICLRSNVKPPSTGHR
ELDYVKIINGTLPQGIRCTGWTPVSDGASPFPQVYDGDPLPIQKYWTAVK
QGQIEETVPIRRPGQPFSARFDASYRSYKYFFPRGDLNIDAMREGASFFE
GTHDFRNFCRIDENVTNFERHMFSVQVRRMHDDALVLDGKDDEYTIYFIF
VKGQAFLWHQVRCMTAVLFDIGMGNEQPDLIKRMLADAKTCSGQFSNGRP
QYKMASPVPLLLYECTYPRTVLHFPQTFERNFHPAVASSVDLRRSSFERA
NSAIAKNFAAEAAKMSILQTVLKDQDELVSYIPENETGHASKSFKELRGP
RNFVIDHMHRRHIPYEERLTDDSLKMKQKKAALKLKSRNRLHISTSCTPE
THQSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR020095PsdUridine_synth_TruA_C
IPR020094TruA/RsuA/RluB/E/F_N
IPR001406PsdUridine_synth_TruA
IPR020103PsdUridine_synth_cat_dom_sf