Gvermi8144.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi8144.t1
Unique Name	Gvermi8144.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	659

Homology

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BLAST of Gvermi8144.t1 vs. uniprot
Match: R7Q8N3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8N3_CHOCR)

HSP 1 Score: 301 bits (772), Expect = 3.280e-92
Identity = 149/342 (43.57%), Postives = 229/342 (66.96%), Query Frame = 0

Query:  316 RLPWWRTTESLVSLPSSPANAEDLLKFYVMAVIRSCVRGSWSGDALKQCFDKDPSSSRGKAFLAVSSSLLLMERARHMGQCHVKWRPELIRELVQRRVIEWSRIQKHVSFDHFAGCDVCLGHREATIRLWLRGDRYDSSDFWPGSSRVDVLTAEERDDGVLSVAVELQRGTKNERYVRIGGPN--EKGDSEFWVDPQCLRKCLLFHELVHATAIIARDLRILIEDELRNGVVHLDMRNRVPGDEKLGVSERLERYLVQAVSENRDFLKRRTKHLMEIVRLGDIYFSAVEEELIDSGN-PERRASRRTPQIYDPPIVLNDEKYKDRIERIVSLTQQRGLTASF 654
            +LPWWR+  S +S P   +   D+L+ Y++ +IRSC+R SW+ + L++ ++ +PSS RG AFLAVSSSLL+M RARHMGQC   W  +L++EL+QRR +EW+ I+    F HF GC+ CL HR AT  L L+G +YDSSDFWP S R+D+L + E D G L++AVEL  G+      R G P   ++G+ EFWVD QCLRKCL+FHELVH+T+I+  ++  L+EDEL++GVV +    ++P +E   + + ++ +LV  +  N+ FL+++ +H  ++  +G+ YFSAV+E +  S   P+   +  + ++YD P+ L  E+Y  R++ + SLT+ +  + SF
Sbjct:  103 QLPWWRSVGSRLSRPMRRSKDTDVLRGYILTLIRSCLRPSWNAEKLRESYELNPSSIRGSAFLAVSSSLLIMHRARHMGQCRTMWHTQLLQELLQRRELEWTAIETDPCFQHFLGCEACLAHRPATRCLRLKGVKYDSSDFWPMSCRLDILASTEAD-GALTLAVELAPGS------RPGQPTIGDEGEVEFWVDEQCLRKCLVFHELVHSTSILTEEVMCLVEDELQDGVVSVRKAQQLP-EEGTSLVDLVQCHLVDVLCRNKHFLEKQIQHFADMTHIGEAYFSAVDEGIPGSHQEPKDAETNSSARVYDAPLSLRHEQYAGRMKTLESLTEIKKPSTSF 436

The following BLAST results are available for this feature:

BLAST of Gvermi8144.t1 vs. uniprot

BLAST of Gvermi8144.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7Q8N3_CHOCR	3.280e-92	43.57	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24226	contig	ScGOVlb_24226:1229025..1231001 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi8144.t1	Gvermi8144.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24226 1229025..1231001 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi8144.t1 ID=Gvermi8144.t1|Name=Gvermi8144.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=659bp
MAGKGKRKAVGQPISSTQATKRQKHSVRSSPVSKIPTRADKFRATGSQLD
KTSNTPAKTELADTHICVAVTKAINESKQLKKCKGEARKDLCSNIVDLLT
EALVKDVNAANLNGDPANVSLSARDEPIPVDDAPQKNPKLSQVHSQKRLK
KTTALAPSKSIPPSSKQKGKHSQKAVLEPEKRQSRKQLGTPKLSEKARPK
APPKKGKPKSDAQSIMNVSGKPKKKSTKRTATESPISRLPKNGKQPPTET
ILFIEESIVDGGAAMKSEPRSFSVTKTRRQKSVDGYDTEVVLDSSDHDLN
PSQSKSKDLILNTRSRLPWWRTTESLVSLPSSPANAEDLLKFYVMAVIRS
CVRGSWSGDALKQCFDKDPSSSRGKAFLAVSSSLLLMERARHMGQCHVKW
RPELIRELVQRRVIEWSRIQKHVSFDHFAGCDVCLGHREATIRLWLRGDR
YDSSDFWPGSSRVDVLTAEERDDGVLSVAVELQRGTKNERYVRIGGPNEK
GDSEFWVDPQCLRKCLLFHELVHATAIIARDLRILIEDELRNGVVHLDMR
NRVPGDEKLGVSERLERYLVQAVSENRDFLKRRTKHLMEIVRLGDIYFSA
VEEELIDSGNPERRASRRTPQIYDPPIVLNDEKYKDRIERIVSLTQQRGL
TASFATFG*