Gvermi7924.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7924.t1
Unique NameGvermi7924.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length280
Homology
BLAST of Gvermi7924.t1 vs. uniprot
Match: A0A2V3ITT3_9FLOR (DNA ligase (NAD(+)) n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITT3_9FLOR)

HSP 1 Score: 353 bits (906), Expect = 2.220e-112
Identity = 191/304 (62.83%), Postives = 223/304 (73.36%), Query Frame = 0
Query:    1 MPRHQTCAGLGEAEAFAIRIEEERSRLPMEVNGIVFKFNDSRAREMAGHTARAPRGAIAYKFAAQSRVTRLNDVVMQVSREGLITPVAILEPVRIGGALMSRAALHNFDEVKRLGVAVGDMVRIERGGDVIPKVIHVDKRLGDPSRLEVVAPSRCPS---------------------------------------PDAMDIRGLGKKTAEKLVESEVVVFLADLFSLTLDDLLNLEGFALKSASQLYENIQEAASSRSFERLILGLGFPGVGRTGARALARKIGSLSNLIETARSEDATEKLL 265
            MP  +TC+G+ EAE FA+R+EE+RS L MEV+G+V K +D+RARE AGHTARAPRGAIAYKFAAQS+VT+L DVVMQVSR GLITPVAILEPV+IGGAL+SRA LHNFDEVKRLGVAVGD VR+ERGGDVIPKV++V+K+  +  R E+  P+ CPS                                        +AMDIRGLGKKTAEKL ES VVV   D+F LTLDD+LNLEGFA KSASQLYENIQEAAS+RS ER++ G+G PGVGRTGARALA K+GSL  L E A  E+  E L+
Sbjct:  444 MPMRKTCSGITEAEEFALRVEEDRSLLAMEVDGVVLKLDDARAREAAGHTARAPRGAIAYKFAAQSKVTQLKDVVMQVSRAGLITPVAILEPVKIGGALLSRATLHNFDEVKRLGVAVGDCVRVERGGDVIPKVLNVEKKGEEAERSEITPPTNCPSCGSELKHGRAPRTGAHLIGCTNNVNCSSQTLGRLIHFCGREAMDIRGLGKKTAEKLTESGVVVVPVDVFRLTLDDILNLEGFAEKSASQLYENIQEAASTRSLERVLFGVGLPGVGRTGARALAAKLGSLQTLFEIATKENGLETLM 747          
BLAST of Gvermi7924.t1 vs. uniprot
Match: R7QHN1_CHOCR (DNA ligase (NAD(+)) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHN1_CHOCR)

HSP 1 Score: 315 bits (808), Expect = 1.130e-97
Identity = 173/304 (56.91%), Postives = 209/304 (68.75%), Query Frame = 0
Query:    1 MPRHQTCAGLGEAEAFAIRIEEERSRLPMEVNGIVFKFNDSRAREMAGHTARAPRGAIAYKFAAQSRVTRLNDVVMQVSREGLITPVAILEPVRIGGALMSRAALHNFDEVKRLGVAVGDMVRIERGGDVIPKVIHVDKRLGDPSRLEVVAPSRCPS---------------------------------------PDAMDIRGLGKKTAEKLVESEVVVFLADLFSLTLDDLLNLEGFALKSASQLYENIQEAASSRSFERLILGLGFPGVGRTGARALARKIGSLSNLIETARSEDATEKLL 265
            MPR + C  L  AE FA  +EE+R  LP+EV+G+V KFNDSRARE AGHTARAPRGA+A KFAAQS+VT L DVVMQVSR G+ITPVAIL+PVR+GGA++SRA LHNFDEV+RLGVAVGD VR+ERGGDVIPK++ V++R     R E+  P  CPS                                        DAMDIRGLGKKTA+KL++S  +V LADLF LTL DLL+LEGFA KSA  L ++I+EA++ RS E LI GLG P VGRTGARALA+ + S+  L+E A  ED  + L+
Sbjct:  483 MPRFERCGDLTTAELFANVVEEDRRSLPLEVDGVVLKFNDSRAREAAGHTARAPRGAVALKFAAQSKVTVLEDVVMQVSRNGVITPVAILKPVRVGGAVLSRATLHNFDEVQRLGVAVGDDVRVERGGDVIPKIVKVERRSSSMERRELQPPLECPSCFGEVLSETDDLTGSSTVECQNAEKCLAQVHGRLIHFAAKDAMDIRGLGKKTADKLIDSGHIVVLADLFRLTLGDLLSLEGFAEKSAQTLLDSIREASTQRSLENLIFGLGLPTVGRTGARALAQNVMSIERLLEIALHEDEADSLI 786          
BLAST of Gvermi7924.t1 vs. uniprot
Match: UPI0003B3BAE3 (NAD-dependent DNA ligase LigA n=1 Tax=Methylohalobius crimeensis TaxID=244365 RepID=UPI0003B3BAE3)

HSP 1 Score: 199 bits (506), Expect = 1.570e-55
Identity = 120/285 (42.11%), Postives = 161/285 (56.49%), Query Frame = 0
Query:    2 PRHQTCAGLGEAEAFAIRIEEERSRLPMEVNGIVFKFNDSRAREMAGHTARAPRGAIAYKFAAQSRVTRLNDVVMQVSREGLITPVAILEPVRIGGALMSRAALHNFDEVKRLGVAVGDMVRIERGGDVIPKVIHVDKRLGDPSRLEVVAPSRCP---------------------------------SPDAMDIRGLGKKTAEKLVESEVVVFLADLFSLTLDDLLNLEGFALKSASQLYENIQEAASSRSFERLILGLGFPGVGRTGARALARKIGSLSNLIE 253
            P + T + L E + +  ++  +R  L  E++GIV K +D R RE  G   R PR AIA+KF  +  VT + D+V+QV R G++TPVA+L+PV + G  +SRA LHN DE++R  + VGD VRI R GDVIP+V    K+ G         P RCP                                 + DAMDI  LG+KTA +LV+ E V  LADL++LT+DD+ +LEGFA +SA QLYE IQ A   R  +R + GLG P VG+  AR LA +  SL+ L E
Sbjct:  272 PLNTTASSLKEIQEYHQKLAAQRDELDYEIDGIVIKIDDHRLREALGTRERNPRWAIAWKFEPREEVTTVEDIVVQVGRTGILTPVALLQPVDVSGVTVSRATLHNADEIRRKDIRVGDRVRIIRAGDVIPEVNERIKQPGKKRSSPFTMPKRCPVCDSQIVREGAYYLCTGGLSCPAQLAARIQHYATRDAMDIEHLGEKTAAQLVKREFVHDLADLYALTVDDIESLEGFAERSARQLYEAIQNAKQPR-LDRFLYGLGIPHVGQRMARLLAERFRSLATLTE 555          
BLAST of Gvermi7924.t1 vs. uniprot
Match: A0A352FT96_9BACT (DNA ligase n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A352FT96_9BACT)

HSP 1 Score: 195 bits (496), Expect = 3.430e-54
Identity = 120/279 (43.01%), Postives = 164/279 (58.78%), Query Frame = 0
Query:    7 CAGLGEAEAFAIRIEEERSRLPMEVNGIVFKFNDSRAREMAGHTARAPRGAIAYKFAAQSRVTRLNDVVMQVSREGLITPVAILEPVRIGGALMSRAALHNFDEVKRLGVAVGDMVRIERGGDVIPKVIHV--------DKRLGDP----------SRLEVVAPSRCPSPD----------------AMDIRGLGKKTAEKLVESEVVVFLADLFSLTLDDLLNLEGFALKSASQLYENIQEAASSRSFERLILGLGFPGVGRTGARALARKIGSLSNL 251
            C  + E   F  R+E +R  L  E++G+V K N +  ++  G T +APR AIAYK+AA+   TR+ND+V+QV R G +TPVA+LEPV++GG  +SR+ LHN DE++RLG+ +GD V +ERGGDVIPKV+ V        +K+   P          SR E  A SRC + D                AM I GLG   AE+L++ ++V  +ADL++LTLDDL +L+  A KSAS +   I+E+  +R    LI GLG   VG   A  LAR  GSL  L
Sbjct:  263 CKTIDEVVDFCNRMEAKRDNLDYEIDGVVVKVNSTALQDQFGATGKAPRWAIAYKYAARQATTRVNDIVVQVGRTGALTPVAMLEPVQLGGVTVSRSTLHNEDEIERLGLKIGDYVLVERGGDVIPKVVKVIESKRTGKEKKFRPPTKCPVCGGLVSRPEGEAVSRCIAADCGAQLIGRLLHFASRRAMRIEGLGGALAEQLLDRKLVKDVADLYTLTLDDLASLDRMAEKSASNVLAQIEES-KTRDLWHLIYGLGIRHVGERTAAILARHFGSLDRL 540          
BLAST of Gvermi7924.t1 vs. uniprot
Match: A0A660ZIR2_9BACT (DNA ligase n=1 Tax=Candidatus Hydrothermae bacterium TaxID=2250085 RepID=A0A660ZIR2_9BACT)

HSP 1 Score: 195 bits (496), Expect = 3.870e-54
Identity = 122/281 (43.42%), Postives = 152/281 (54.09%), Query Frame = 0
Query:    7 CAGLGEAEAFAIRIEEERSRLPMEVNGIVFKFNDSRAREMAGHTARAPRGAIAYKFAAQSRVTRLNDVVMQVSREGLITPVAILEPVRIGGALMSRAALHNFDEVKRLGVAVGDMVRIERGGDVIPKVIHV--DKRLGDPSRLEVVAPSRCP--------------------------------SPDAMDIRGLGKKTAEKLVESEVVVFLADLFSLTLDDLLNLEGFALKSASQLYENIQEAASSRSFERLILGLGFPGVGRTGARALARKIGSLSNLIE 253
            C  + E   F  RIE ER     E++GIV K ND    E  G TAR+PR AIA KF  + R T++ DVV QV R G ITPVA+LEPV + G ++SRA LHNFD VK + V VGD V ++R GDVIP+++ V  DKR G    +E   P+RCP                                S  AMDI GLG KTA+ LVE  +V  LAD+F L  +D+L L GFA KSA  L + I  A       R +  +G P VG   A+ LA K GSL  L++
Sbjct:  269 CKNIDEVIEFYHRIESERDSFDYELDGIVVKVNDMELWERLGSTARSPRWAIAGKFKPRQRTTKILDVVYQVGRTGTITPVAVLEPVEVSGVIVSRATLHNFDYVKLMDVRVGDTVVVQRAGDVIPEIVSVVKDKRTGKERPIE--PPTRCPVCGADVVKEGAYYRCVNISCPAKLVQALIHFASRRAMDIEGLGGKTAQLLVERGLVKDLADIFYLKKEDILKLPGFADKSAQNLIDGINRAKQDVPLHRFLYAIGIPNVGEFTAKLLADKFGSLEKLMK 547          
BLAST of Gvermi7924.t1 vs. uniprot
Match: A0A3M1S2L4_9BACT (DNA ligase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M1S2L4_9BACT)

HSP 1 Score: 190 bits (482), Expect = 7.620e-54
Identity = 118/291 (40.55%), Postives = 164/291 (56.36%), Query Frame = 0
Query:    2 PRHQTCAGLGEAEAFAIRIEEERSRLPMEVNGIVFKFNDSRAREMAGHTARAPRGAIAYKFAAQSRVTRLNDVVMQVSREGLITPVAILEPVRIGGALMSRAALHNFDEVKRLGVAVGDMVRIERGGDVIPKVIHV--DKRLGDPS----------------RLEVVAPSRCPSPD----------------AMDIRGLGKKTAEKLVESEVVVFLADLFSLTLDDLLNLEGFALKSASQLYENIQEAASSRSFERLILGLGFPGVGRTGARALARKIGSLSNLIETARSE 258
            P  + C  + E   F   + E+R  L  +++GIV K N +  +E  G T +APR AIAYK+ A    T+LND+V+QV R G +TPVAILEPV + G  +SRA+LHN DE+KRLG+ +GD V IE+ G++IP+VI V   KR G                   R E  A  RC +P+                AMDI GLG+   E+LV+  +V  +ADL+SL L+ +++LE    KSAS+L E I E + +R  ERL+LGL    VG   A+ LA    ++  LIE ++ E
Sbjct:   40 PHRKLCRNIDEVIDFINEMLEKRDSLDYDIDGIVIKVNQTALQEEFGATTKAPRWAIAYKYPALQATTKLNDIVVQVGRTGALTPVAILEPVHLAGTTVSRASLHNEDEIKRLGIKIGDWVLIEKSGEIIPQVIQVIESKRTGHEREFNFPTTCPVCGAQAVRPEGEAVRRCINPECPAKIKARIIHFASRKAMDIEGLGEALVEQLVDKGLVKDVADLYSLKLEQIVDLERMGKKSASKLLEQI-ENSKTRGMERLLLGLDIRHVGERYAKILANHFQTIDRLIEVSKEE 329          
BLAST of Gvermi7924.t1 vs. uniprot
Match: A0A497Q8V4_THOAR (DNA ligase (NAD(+)) (Fragment) n=1 Tax=Thorarchaeota archaeon (strain OWC) TaxID=2053491 RepID=A0A497Q8V4_THOAR)

HSP 1 Score: 188 bits (478), Expect = 1.110e-53
Identity = 117/283 (41.34%), Postives = 163/283 (57.60%), Query Frame = 0
Query:   12 EAEAFAIRIEEERSRLPMEVNGIVFKFNDSRAREMAGHTARAPRGAIAYKFAAQSRVTRLNDVVMQVSREGLITPVAILEPVRIGGALMSRAALHNFDEVKRLGVAVGDMVRIERGGDVIPKVIHV--DKRLGDPSRLEVVAPSRCP----------------------------------SPDAMDIRGLGKKTAEKLVESEVVVFLADLFSLTLDDLLNLEGFALKSASQLYENIQEAASSRSFERLILGLGFPGVGRTGARALARKIGSLSNLIETARSE 258
            EA  +   +EE+R  L  E++G V K N    ++  G T + PR AIAYKFAA+   TRL D+ +QV R G +TPVAILEPV++GG  +SRA LHNFDE+KR  + VGDMV +ER GDVIP+V+    +KR G+  R++ + P +CP                                  S DAMDI  LG+ T +KL+E   V  +ADL++LT + +L LEGF  KSA  L ++I+++  ++S  RLI GLG   VG+  A+ LA K  S+  L + +  E
Sbjct:   10 EAILYCKELEEKRETLDYEIDGTVLKVNSISKQKELGETIKHPRWAIAYKFAAKQATTRLQDIAIQVGRTGTLTPVAILEPVQVGGVTVSRATLHNFDELKRKDIRVGDMVLVERSGDVIPQVVKSIKEKRTGN-ERVKRI-PKKCPVCGSDIIPTEGEVAVRCQNRMCPARLKWRIKYFASRDAMDIDHLGESTIDKLIEKGYVDNIADLYNLTKEKILTLEGFKEKSAQNLIDSIKKS-KNQSLSRLIYGLGIRHVGKYAAQILASKYNSIDELSKASVEE 289          
BLAST of Gvermi7924.t1 vs. uniprot
Match: A0A5E4I7Y2_9ARCH (DNA ligase n=3 Tax=Archaea TaxID=2157 RepID=A0A5E4I7Y2_9ARCH)

HSP 1 Score: 193 bits (491), Expect = 1.540e-53
Identity = 120/281 (42.70%), Postives = 160/281 (56.94%), Query Frame = 0
Query:   12 EAEAFAIRIEEERSRLPMEVNGIVFKFNDSRAREMAGHTARAPRGAIAYKFAAQSRVTRLNDVVMQVSREGLITPVAILEPVRIGGALMSRAALHNFDEVKRLGVAVGDMVRIERGGDVIPKVIH--VDKRLGDPS-----------RLEVVAPS-----RCP----------------SPDAMDIRGLGKKTAEKLVESEVVVFLADLFSLTLDDLLNLEGFALKSASQLYENIQEAASSRSFERLILGLGFPGVGRTGARALARKIGSLSNLIETARSE 258
            EA  F   +E +R  L  E++G+V K N    ++  G T + PR AIA+KF A+   TRLND+V+QV R G +TPVAILEPV++GG  +SRA LHNFDE+KR  + +GDMV +ER GDVIP+V+   ++KR GD             R +V+  S     RCP                S DAMDI  LG +T +KL+E   V  +ADL+ LT +DLL LEGF  KS   L E+I E +  +   RLI GLG   VG+  A+ LA +  S+  L +    E
Sbjct:  261 EATKFCADLEAKRESLDYEIDGVVLKVNSFSQQKELGSTIKHPRWAIAFKFTAKQATTRLNDIVVQVGRTGTLTPVAILEPVQVGGVTVSRATLHNFDELKRKDIRIGDMVLVERSGDVIPQVVKSIIEKRKGDEKARAIPKKCPVCRSDVIRTSDEVAVRCPNKECPARLKWRIEYFASRDAMDIDHLGGQTIDKLIEKGFVDTIADLYGLTKEDLLTLEGFKDKSVENLLESI-EKSKHQGLARLIYGLGIRHVGKFAAQLLASQYHSIDELAKKTAEE 540          
BLAST of Gvermi7924.t1 vs. uniprot
Match: A0A7Y8I3L2_9BACT (DNA ligase n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7Y8I3L2_9BACT)

HSP 1 Score: 192 bits (487), Expect = 6.250e-53
Identity = 116/291 (39.86%), Postives = 162/291 (55.67%), Query Frame = 0
Query:    2 PRHQTCAGLGEAEAFAIRIEEERSRLPMEVNGIVFKFNDSRAREMAGHTARAPRGAIAYKFAAQSRVTRLNDVVMQVSREGLITPVAILEPVRIGGALMSRAALHNFDEVKRLGVAVGDMVRIERGGDVIPKVIHVDKRLGDPSRLEVVAPSRCPSPDA----------------------------------MDIRGLGKKTAEKLVESEVVVFLADLFSLTLDDLLNLEGFALKSASQLYENIQEAASSRSFERLILGLGFPGVGRTGARALARKIGSLSNLIETARSE 258
            P    C+ LGE  AF  + EE R  LP E++G+V K +    + + G TA+APR AIAYKF+A++  T L ++ +QV R G +TPVA L PV +GG  +SRA LHN +E+ RLG A+GD V +ER GDVIPKV+ V KR   P R   + P++CP  D+                                  MDI G+G+   ++LV+  +V  +ADL+SLT + L +LE    KSA+++  NI +A+  R   RLI GLG P VG   A+ +A  I S+S L    + E
Sbjct:  257 PERSLCSSLGELLAFCTKWEEARETLPFEIDGVVAKVDSVAQQRLLGWTAKAPRWAIAYKFSARAAETVLENIEVQVGRTGTLTPVACLRPVVVGGVTVSRATLHNEEEIARLGAAIGDTVLVERSGDVIPKVVEVRKR--PPERRAFIMPTKCPVCDSIVVRAEGEVASRCLNTNCPARLKESLLHWSARTVMDIDGVGEALVDQLVDLGLVRSIADLYSLTFEQLKDLERMGEKSAAKVLANI-DASRRRPLPRLIAGLGIPFVGERTAQLIAEAIPSISRLRAATQEE 544          
BLAST of Gvermi7924.t1 vs. uniprot
Match: A0A847AXM9_9BACT (DNA ligase (NAD(+)) n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A847AXM9_9BACT)

HSP 1 Score: 186 bits (472), Expect = 8.830e-53
Identity = 104/274 (37.96%), Postives = 161/274 (58.76%), Query Frame = 0
Query:   19 RIEEERSRLPMEVNGIVFKFNDSRAREMAGHTARAPRGAIAYKFAAQSRVTRLNDVVMQVSREGLITPVAILEPVRIGGALMSRAALHNFDEVKRLGVAVGDMVRIERGGDVIPKVIHVDKRLGDPSRLEVVAPSRCPS----------------------------------PDAMDIRGLGKKTAEKLVESEVVVFLADLFSLTLDDLLNLEGFALKSASQLYENIQEAASSRSFERLILGLGFPGVGRTGARALARKIGSLSNLIETARSE 258
            ++EEER     +++G V K +    +E  GHTAR+PR A+A+KF A+S VT+L  V   V R G+ITP A L+PV +GG  +S A LHN+D+++RLGV +GD+VRIERGGDVIPK+++++K+   P+  +++ P  CPS                                   DAM+I GLG+  A +L  + +V  ++D++ L   DLL LE F  K AS L E+I+E+ +  S +  I  LG P +GR  ++ LA++ G++ +L++ A  +
Sbjct:   17 KMEEERDLKDYDIDGAVIKVDSISDQEKLGHTARSPRWAVAFKFRAKSAVTQLLQVSYNVGRTGVITPRATLKPVTVGGVTISSATLHNYDQIERLGVGIGDLVRIERGGDVIPKILNLEKK--SPNSKKILPPETCPSCGEPSFREPEGVYYRCNNISCPAQMIRRIIHFASQDAMNIEGLGESVAAQLYHANLVENISDIYQLEKTDLLGLELFKEKRASNLMESIRESQNI-SLDSFIFALGIPNIGRQTSKTLAKRFGNIHSLMQAAEDD 287          
The following BLAST results are available for this feature:
BLAST of Gvermi7924.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITT3_9FLOR2.220e-11262.83DNA ligase (NAD(+)) n=1 Tax=Gracilariopsis chorda ... [more]
R7QHN1_CHOCR1.130e-9756.91DNA ligase (NAD(+)) n=1 Tax=Chondrus crispus TaxID... [more]
UPI0003B3BAE31.570e-5542.11NAD-dependent DNA ligase LigA n=1 Tax=Methylohalob... [more]
A0A352FT96_9BACT3.430e-5443.01DNA ligase n=1 Tax=Blastocatellia bacterium TaxID=... [more]
A0A660ZIR2_9BACT3.870e-5443.42DNA ligase n=1 Tax=Candidatus Hydrothermae bacteri... [more]
A0A3M1S2L4_9BACT7.620e-5440.55DNA ligase n=1 Tax=Acidobacteria bacterium TaxID=1... [more]
A0A497Q8V4_THOAR1.110e-5341.34DNA ligase (NAD(+)) (Fragment) n=1 Tax=Thorarchaeo... [more]
A0A5E4I7Y2_9ARCH1.540e-5342.70DNA ligase n=3 Tax=Archaea TaxID=2157 RepID=A0A5E4... [more]
A0A7Y8I3L2_9BACT6.250e-5339.86DNA ligase n=1 Tax=Bryobacteraceae bacterium TaxID... [more]
A0A847AXM9_9BACT8.830e-5337.96DNA ligase (NAD(+)) n=1 Tax=Elusimicrobia bacteriu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003583Helix-hairpin-helix DNA-binding motif, class 1SMARTSM00278HhH1_4coord: 192..211
e-value: 160.0
score: 9.7
coord: 158..177
e-value: 0.05
score: 22.7
IPR013840NAD-dependent DNA ligase, N-terminalSMARTSM00532ligaN3coord: 1..171
e-value: 3.2E-7
score: -164.9
IPR013839NAD-dependent DNA ligase, adenylationPFAMPF01653DNA_ligase_adencoord: 4..65
e-value: 2.4E-11
score: 43.3
NoneNo IPR availableGENE3D2.40.50.140coord: 69..152
e-value: 4.2E-27
score: 95.6
NoneNo IPR availableGENE3D1.10.150.20coord: 156..215
e-value: 3.6E-16
score: 60.7
NoneNo IPR availableGENE3D3.30.1490.70coord: 1..68
e-value: 3.6E-15
score: 57.9
NoneNo IPR availablePFAMPF14520HHH_5coord: 159..213
e-value: 4.5E-5
score: 23.9
NoneNo IPR availableGENE3D1.10.150.20coord: 217..268
e-value: 7.2E-6
score: 28.1
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 11..260
NoneNo IPR availablePANTHERPTHR23389:SF9BRCT DOMAIN-CONTAINING PROTEINcoord: 11..260
NoneNo IPR availableSUPERFAMILY56091DNA ligase/mRNA capping enzyme, catalytic domaincoord: 3..64
IPR004150NAD-dependent DNA ligase, OB-foldPFAMPF03120DNA_ligase_OBcoord: 69..140
e-value: 2.3E-26
score: 91.5
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 65..142
IPR010994RuvA domain 2-likeSUPERFAMILY47781RuvA domain 2-likecoord: 153..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:9059..10020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7924.t1Gvermi7924.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 9059..10020 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7924.t1 ID=Gvermi7924.t1|Name=Gvermi7924.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=280bp
MPRHQTCAGLGEAEAFAIRIEEERSRLPMEVNGIVFKFNDSRAREMAGHT
ARAPRGAIAYKFAAQSRVTRLNDVVMQVSREGLITPVAILEPVRIGGALM
SRAALHNFDEVKRLGVAVGDMVRIERGGDVIPKVIHVDKRLGDPSRLEVV
APSRCPSPDAMDIRGLGKKTAEKLVESEVVVFLADLFSLTLDDLLNLEGF
ALKSASQLYENIQEAASSRSFERLILGLGFPGVGRTGARALARKIGSLSN
LIETARSEDATEKLLDRLKLLPRERLKVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003583Hlx-hairpin-Hlx_DNA-bd_motif
IPR013840DNAligase_N
IPR013839DNAligase_adenylation
IPR004150NAD_DNA_ligase_OB
IPR012340NA-bd_OB-fold
IPR010994RuvA_2-like