Gvermi7969.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7969.t1
Unique NameGvermi7969.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length499
Homology
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BLAST of Gvermi7969.t1 vs. uniprot
Match: A0A2V3IQ42_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ42_9FLOR)

HSP 1 Score: 552 bits (1422), Expect = 3.580e-191
Identity = 301/498 (60.44%), Postives = 373/498 (74.90%), Query Frame = 0 
Query:    7 ALLLCSVCFYTHAQIIADLPPLPSPSPHETPSPLPSALLELVHPSPSPLAPTAVPPHQSLAPHWSQPGGADAAXXXXXXXXXXXXXXNVXXXXXXXTFPSDARPVPSHAASPSE--QFINADGKCVRDVSKPRPKLGKSQLRYAMCVLLGTAGVAVASLLYSLAADWEAKQDHSWLRLFWIILARLLILATVKISAALVASITKASPDDSALDASGAFLTWGSAIFTRLYYEGFKMNLATLEFIDAESVWHDELRHFLSARSPFLPDGEHELLSAEK----NPGADAHSCDPSRLTIRQRLFGGNFERKLLMVTSLLYIASELSVLTANVAALVDAFRPDLTRIVYFSSDESAGQCGMSAADVPIIFGVVALQILNALTQQPSLVPILSVSASCGQQKYENGSQFMPWMRWVAGMVLWMWVSSTLALPLFAWSLNPIFTGGDLTLFWYIIIAPPTYTSVSYIISATFAIFAALVGSFIMIRVARSQRVKQKQNANAVP 498
            ++++CS+C    AQ++ DLPPLPS S   +PSPLPSALL++VHPSPSP++PT VPP  S  P  S+P                             +    + P+ + +ASPS   +F NADGKC RD+S+PRPKLGKSQLRYA+CVLL  A V +AS+LY LAA+WEAK+DHSW+R F II +R+LIL  VKISAALVASITKASP+D ALDASGAFLTWGSAIFTRLYYEGFKMNLA LEFIDA++VWH ELR +LSAR   +PD E E+L+  +    +   D +     RLTI+QRL GG+FERKLLM TS+LYIASE+SVLT NV  LVDA R   T +VYFSSD+SAGQCG+S +D+PII GVV LQ +  LT QPSLVP+LSV+A+CG Q+Y+  ++ +  +RW+AG+VLW+WV S LALPLF+W LNPIFT GDLTLFWYIIIAP TYTSVS+II+ATFA FAA+VGSF++IR+ RSQR  +K+  +A+P
Sbjct:   22 SVVVCSLCTLASAQVVPDLPPLPSASLPVSPSPLPSALLDIVHPSPSPVSPTGVPPKASAVP--SEPVEEQNTSQGSSTFVPSPTLGAKPSKTPSASSAITSAPIITASASPSPFWEFTNADGKCERDISRPRPKLGKSQLRYAVCVLLSGAAVGLASVLYGLAAEWEAKEDHSWIRFFSIITSRVLILCAVKISAALVASITKASPEDGALDASGAFLTWGSAIFTRLYYEGFKMNLAILEFIDADTVWHHELREYLSARVA-IPDDEDEMLNKSEGGLNDRATDRNQRTADRLTIKQRLLGGHFERKLLMFTSVLYIASEISVLTVNVIGLVDALRTKPTDVVYFSSDDSAGQCGLSYSDLPIIGGVVVLQAIYGLTHQPSLVPLLSVTAACGAQRYQKSNKMLLCLRWIAGVVLWLWVCSLLALPLFSWGLNPIFTSGDLTLFWYIIIAPATYTSVSFIITATFASFAAIVGSFMIIRIDRSQR--RKEGIDAIP 514
The following BLAST results are available for this feature:
BLAST of Gvermi7969.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQ42_9FLOR3.580e-19160.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 310..334
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 218..235
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 484..498
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 207..217
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 431..436
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 236..309
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 335..407
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 457..461
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..167
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 408..430
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 168..178
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..206
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 437..456
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 462..483
NoneNo IPR availableTMHMMTMhelixcoord: 458..480
NoneNo IPR availableTMHMMTMhelixcoord: 416..438
NoneNo IPR availableTMHMMTMhelixcoord: 147..169
NoneNo IPR availableTMHMMTMhelixcoord: 184..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:342111..343704 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7969.t1Gvermi7969.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 342111..343704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7969.t1 ID=Gvermi7969.t1|Name=Gvermi7969.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=499bp
MNCIANALLLCSVCFYTHAQIIADLPPLPSPSPHETPSPLPSALLELVHP
SPSPLAPTAVPPHQSLAPHWSQPGGADAAASSLAPPPTAAAPPNVPAAAP
PPTFPSDARPVPSHAASPSEQFINADGKCVRDVSKPRPKLGKSQLRYAMC
VLLGTAGVAVASLLYSLAADWEAKQDHSWLRLFWIILARLLILATVKISA
ALVASITKASPDDSALDASGAFLTWGSAIFTRLYYEGFKMNLATLEFIDA
ESVWHDELRHFLSARSPFLPDGEHELLSAEKNPGADAHSCDPSRLTIRQR
LFGGNFERKLLMVTSLLYIASELSVLTANVAALVDAFRPDLTRIVYFSSD
ESAGQCGMSAADVPIIFGVVALQILNALTQQPSLVPILSVSASCGQQKYE
NGSQFMPWMRWVAGMVLWMWVSSTLALPLFAWSLNPIFTGGDLTLFWYII
IAPPTYTSVSYIISATFAIFAALVGSFIMIRVARSQRVKQKQNANAVP*
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