Gvermi8155.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi8155.t1
Unique Name	Gvermi8155.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	512

Homology

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BLAST of Gvermi8155.t1 vs. uniprot
Match: A0A2V3IW44_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW44_9FLOR)

HSP 1 Score: 487 bits (1253), Expect = 1.370e-165
Identity = 256/492 (52.03%), Postives = 332/492 (67.48%), Query Frame = 0

Query:   13 TLKQCLTELPKEEPKNLTFDDADQPPDSVLFAAALVVLTVTLIDITVFVKTRRRLKYFFLLLFITFVALTILWSEHVVEVVFQASALVRDTKWVWIASQCYKKFEVIQKWNFQPWMPLVTDTFRIIATGLESFVILLGIIQDYCVKRRLNRRKLFISAVVIAVSGGLAACIMIRARSAVYGCSYSPQIDRYTCRVRDQAYAKKVLTADQVKQCDAKTQVQINNPAPISRLKLNQKDPGRNIPECTKNDGEAIMLGGFGRHALLNRFFSEAAIISSIFLAILILSIIFEFYIIVKSIIFRRNIRFPFLMITLASIVLKDLYPLFSGIRKVHDRTESFRLVTCGCMLLNFREFNSELRESVWELVVLVFIIDVAVAFSKEIDGKGIHPDLEDGVDGMNSGGEMSNSGQSDTVALPVHSSPPGKVQAEPVNAIESGTQNVDQPQDGAQEXXXXXXXXHDYPTFYIQPPESLRPRDLFNFASKLVKEARNGNLRPN 504
            TL++CL++LP EEP+   F+D + PPD +LF AALVVL VT++DITVF  T+RRL++FFL LF TFVALT++W EHV+E +F    + +D +WV  AS+CYK F +I++W FQPWMPL  D  RIIATGLES VILL I+QD+CV+RRL+++K FI   VI VSGGLAACIMIR R  VYGC Y   +DRYTCR+++Q+Y+K  L++ QV  CDAKT+ Q+ NPA ISRL L Q+DPGRNIP C   D  A   G + RH LLN+FFSEAA IS +FLAIL+L+I+FE YI+ K+I+FR++I F FLM+TL  IVLKDLYPL S IRK+HD+TES RL+ CGC L  +  +   L +SVWELVVL+ IIDVAV FSKEID   +  D  +  +  +   E SNS Q     L          Q  P   +     N ++ ++  Q+        +D   F + PP SLRPR L  F   +V   +N   +P+
Sbjct:   12 TLEECLSDLPNEEPRGFLFEDGEFPPDYILFIAALVVLVVTVVDITVFFHTKRRLRFFFLFLFTTFVALTVVWFEHVMEAIFAIRDIAKDIRWVRTASKCYKSFGLIERWYFQPWMPLFADICRIIATGLESLVILLSIVQDFCVRRRLSKKKFFICIAVIGVSGGLAACIMIRTRIDVYGCRYELDVDRYTCRMKNQSYSKTALSSGQVNICDAKTESQVKNPAAISRLTLGQEDPGRNIPTCGPADEIARKFGRYSRHTLLNQFFSEAATISGVFLAILLLAIVFELYIVAKTILFRKDISFVFLMLTLGLIVLKDLYPLISDIRKLHDKTESRRLLICGCSLEKYDRYKQALNDSVWELVVLLLIIDVAVTFSKEIDRTAVKYDDPESANDNDVVNEESNSNQGTGDELDAD-------QTRPAAGMGQEEGNANEKEENQQKNQQDVVNGNDVERF-VSPPTSLRPRHLKKFFKDVVSGYQNDGFQPD 495

The following BLAST results are available for this feature:

BLAST of Gvermi8155.t1 vs. uniprot

BLAST of Gvermi8155.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IW44_9FLOR	1.370e-165	52.03	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..480
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 440..458
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 409..425
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 158..165
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 41..60
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 388..511
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 282..304
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 166..187
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 370..387
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 61..66
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 336..369
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 137..157
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 316..335
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..40
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 305..315
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 188..281
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 86..136
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 67..85
None	No IPR available	TMHMM	TMhelix		coord: 40..62
None	No IPR available	TMHMM	TMhelix		coord: 165..187
None	No IPR available	TMHMM	TMhelix		coord: 282..304
None	No IPR available	TMHMM	TMhelix		coord: 130..152
None	No IPR available	TMHMM	TMhelix		coord: 316..338
None	No IPR available	TMHMM	TMhelix		coord: 69..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24226	contig	ScGOVlb_24226:1312696..1314231 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi8155.t1	Gvermi8155.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24226 1312696..1314231 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi8155.t1 ID=Gvermi8155.t1|Name=Gvermi8155.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=512bp
MIINQNIIDTSTTLKQCLTELPKEEPKNLTFDDADQPPDSVLFAAALVVL
TVTLIDITVFVKTRRRLKYFFLLLFITFVALTILWSEHVVEVVFQASALV
RDTKWVWIASQCYKKFEVIQKWNFQPWMPLVTDTFRIIATGLESFVILLG
IIQDYCVKRRLNRRKLFISAVVIAVSGGLAACIMIRARSAVYGCSYSPQI
DRYTCRVRDQAYAKKVLTADQVKQCDAKTQVQINNPAPISRLKLNQKDPG
RNIPECTKNDGEAIMLGGFGRHALLNRFFSEAAIISSIFLAILILSIIFE
FYIIVKSIIFRRNIRFPFLMITLASIVLKDLYPLFSGIRKVHDRTESFRL
VTCGCMLLNFREFNSELRESVWELVVLVFIIDVAVAFSKEIDGKGIHPDL
EDGVDGMNSGGEMSNSGQSDTVALPVHSSPPGKVQAEPVNAIESGTQNVD
QPQDGAQEQEQEQEQEHDYPTFYIQPPESLRPRDLFNFASKLVKEARNGN
LRPNHLMKPKT*