Gvermi8083.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8083.t1
Unique NameGvermi8083.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length279
Homology
BLAST of Gvermi8083.t1 vs. uniprot
Match: A0A2V3J558_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J558_9FLOR)

HSP 1 Score: 301 bits (771), Expect = 1.700e-99
Identity = 158/278 (56.83%), Postives = 196/278 (70.50%), Query Frame = 0
Query:    1 MLSEAISATQDALFRSQLQRVRRASNVAVSDEAQ-LSSRFRVHGWRWHHLGIIRDLTRLETKAAKNRRQLCQVRNEAESGSLRRQMHDALQYIIHDNWALHNFVEHTLFLPWIQSRDASGVHADAVHTISNQRRRLQRHACMLDERIAEWSETNNRKPAMTQQSCENELQTIISNLQRLRRNAALLFDVSEQVLVPHVKLHFSEAEQLRFNSRVLREISPKQARVSLVIFRDALDLKHPVVAHSDDVLNFHRDVPAPIRKVGVPLWRKRFVGDRIRFL 277
            ML +AISATQD   R QL R+RR+   +    A   S+RFRVHGWRWHHL IIRDL RLE  A + R +LC  +N   S SLRRQM  A+QYI+ DNWALHN VEH+LFLPWI  R+   +  D V  +  +R+RL++HA  L+ R+  WS T N + A     CE+EL  II+ +QRLRRNA+ LF  SEQ  VP VK  FSE+EQL+FNS+VL+ IS KQAR+SLV+FRD +D+  PVVA  +D+ NF RDVPAPIR+VGVP WR RFVG++ RFL
Sbjct:    1 MLPDAISATQDLFSRVQLNRLRRSQAASTQQAASPQSARFRVHGWRWHHLSIIRDLIRLENNATRKRNRLCSAQNAPNSDSLRRQMKHAVQYIVRDNWALHNDVEHSLFLPWISDREPREMRRDYVDVVHRERQRLEQHAHALETRVTNWS-TFNYEHA---HQCESELHNIITAIQRLRRNASTLFKASEQFFVPRVKQLFSESEQLQFNSQVLKHISGKQARMSLVMFRDGVDMSEPVVALRNDLNNFERDVPAPIRRVGVPFWRSRFVGEKTRFL 274          
BLAST of Gvermi8083.t1 vs. uniprot
Match: A0A7S1XI44_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XI44_9RHOD)

HSP 1 Score: 102 bits (255), Expect = 4.860e-22
Identity = 81/267 (30.34%), Postives = 129/267 (48.31%), Query Frame = 0
Query:   39 FRVHGWRWHHLGIIRDLTRLETKAAKNRRQLC---QVRNEAESGSLRRQMHDALQYIIHDNWALHNFVEHTLFLPWIQSRDASGVHADAVHTIS-----------NQRRRLQRHACMLDERI----------AEWSETNNRKPA--MTQQSCENELQTIISNLQRLRRNAALLFDVSEQVLVPHVKLHFSEAEQLRFNSRVLREISPKQARVSLVIFRDAL----DLKHPVVAHSDDVLN---------FHRDVPAPIRKVGVPLWR 266
            F V+GW+WHH+ I+R+L R    A + +   C    VR +AE  ++   M +AL+++I D W +H+FVE  L  PWI+   AS   A    T S           +QRR L+     +++R+          +  S  N + PA  M  QSCE  ++ I   L  L    A  ++  E  L P +   + EAEQ R+N+RVL  +S +  R+S+V F +AL      +H     SD   +         F +++P  ++ + +P+WR
Sbjct:   41 FVVYGWQWHHVAIVRELRRTCYLAERAQAACCGRADVRKDAEGRAVVALM-EALRFVIDDVWRVHDFVEERLLFPWIRMSFASQASASRDPTQSRKVSALLRNFESQRRELRSTVEEINQRLDKRFRSLNSSSSASAQNVKTPARAMAPQSCEMFMRDIRGELCGLTERTARFYEREEHSLAPTIAQRYDEAEQRRYNARVLNTLSFEDKRLSIVYFSEALRKTEGKEHDAPPQSDYAYHSAREELIRAFWKEIPPFVQPL-IPVWR 305          
BLAST of Gvermi8083.t1 vs. uniprot
Match: A0A1X6NS65_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NS65_PORUM)

HSP 1 Score: 68.9 bits (167), Expect = 1.320e-9
Identity = 64/271 (23.62%), Postives = 111/271 (40.96%), Query Frame = 0
Query:   39 FRVHGWRWHHLGIIRDLTRLETKAAKNRRQLCQVRNEAESGSLRRQMHDALQYIIHDNWALHNFVEHTLFLPWIQS---------------RDASGVHADA--------------------VHTISNQRRRLQRHACMLDERIAEWSETNNRKPAMTQ--QSCENELQTIISNLQRLRRNAALLFDVSEQVLVPHVKLHFSEAEQLRFNSRVLREISP----KQARVSLVIFRDALDLKHPVVAHSDDVLNFHRDVPAPIRKVGVPLWRKR 268
            FR+HGWRWHH+ I R+L  ++T  A          N  ++ ++   + DA  +     WA+HN +E  +  PWI +                  + V  DA                    + +   +R RL+  +  + E +   +     + A  +   +C  E +  ++ ++ L   A  LF   E  L+P V   FS  EQ R     +  ++       A++ LV+F +AL          ++  +F R+VP P R   +P+W+KR
Sbjct:  143 FRLHGWRWHHVAITRELAAIQTALAAGV-------NCGDADAVAAVV-DAFAFARTSVWAVHNEMERAVLFPWIDTGLCAAPANGGAGGPPTSTAAVVGDARRGTPVAGRSEARQRAVSAALASFGAERERLEAASAEVQEHLMRLATATAERDAPWRGVAACGPETRRAVAAVRSLTDEARALFAAEEAALIPLVSNDFSPDEQARVFLTAVHGLAGGLRGSTAKLQLVLFHEALKAG----GGGEEWGHFKREVPRPAR-AWIPVWKKR 400          
BLAST of Gvermi8083.t1 vs. uniprot
Match: A0A1X6P4I7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4I7_PORUM)

HSP 1 Score: 63.9 bits (154), Expect = 5.790e-8
Identity = 55/199 (27.64%), Postives = 75/199 (37.69%), Query Frame = 0
Query:   20 RVRRASNVAVSDEAQLSSRFRVHGWRWHHLGIIRDLTRLETKAAKNRRQLCQVRNEAESGSLRRQMHDALQYIIHDNWALHNFVEHTLFLPWIQSRDASGVHADAVHTISNQRRRL--QRHACMLDERIAEWSETNNRKPAMTQQSCENELQT-IISNLQRLRRNAALLFDVSEQVLVPHVKLHFSEAEQLRFNSRVLR 215
            R R   +  VS      + F +HGWRWHHL + RDL                    A  G+      D L +++  N+ +HN VE  L  PW+ S    G  A A      +RRR    R A            T          +C       +   L RL  +AA L+   E +L+P V  H S   Q   N R++R
Sbjct:   54 RKRSHRDAVVSSPPPTPAPFIIHGWRWHHLSVARDLAXXXXXXXXXXXXXXPPVCSAGGGATAAATLDGLNFLVAHNFGVHNTVEERLLFPWLASTLPRGHPAVAALPAFARRRRALADRLAAATXXXXXXXXXTGAAGAPADTPACRAVWGGGVAPALGRLAADAAALYAEEEALLIPAVAAHVSLGGQAALNRRIIR 252          
The following BLAST results are available for this feature:
BLAST of Gvermi8083.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J558_9FLOR1.700e-9956.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1XI44_9RHOD4.860e-2230.34Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A1X6NS65_PORUM1.320e-923.62Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6P4I7_PORUM5.790e-827.64Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 161..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:954532..955368 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8083.t1Gvermi8083.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 954532..955368 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8083.t1 ID=Gvermi8083.t1|Name=Gvermi8083.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=279bp
MLSEAISATQDALFRSQLQRVRRASNVAVSDEAQLSSRFRVHGWRWHHLG
IIRDLTRLETKAAKNRRQLCQVRNEAESGSLRRQMHDALQYIIHDNWALH
NFVEHTLFLPWIQSRDASGVHADAVHTISNQRRRLQRHACMLDERIAEWS
ETNNRKPAMTQQSCENELQTIISNLQRLRRNAALLFDVSEQVLVPHVKLH
FSEAEQLRFNSRVLREISPKQARVSLVIFRDALDLKHPVVAHSDDVLNFH
RDVPAPIRKVGVPLWRKRFVGDRIRFLD*
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