Gvermi7971.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7971.t1
Unique NameGvermi7971.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length179
Homology
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BLAST of Gvermi7971.t1 vs. uniprot
Match: A0A2V3ISU7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISU7_9FLOR)

HSP 1 Score: 211 bits (537), Expect = 5.040e-67
Identity = 105/165 (63.64%), Postives = 126/165 (76.36%), Query Frame = 0 
Query:   11 ALIAWTCAQCIRQPVFERWGQLDSSNLVCDGDGGGSSFEVDANRLTHRTFGPLSPERIDGLPAELIPQTLRLVIRRTESGSINKGASFILADGQRYRFGGGSEQRRMFKEKFNVLQALVWGQERGNCPVDSKGQTFPQLASVRISLQTLAATFAVDYCLEAEFRR 175
            ALI      CI QPVFE W  L+S+NL+C+GD GGS+F V+ N L H+  G ++ +R+  LPA LIP  LRLVI R+ SG+INK ASFI ADG+ +RFGGG  QR MFK+ FNVLQALV+ QE G CPVDSKG+TFPQLASVR+SLQTLAATF + YCLEA+F R
Sbjct:   12 ALICMAHGACISQPVFETWEALESANLICEGDAGGSAFRVNENTLVHKILGGVA-DRVPRLPASLIPTELRLVIVRSRSGAINKAASFIRADGKIFRFGGGRWQRGMFKKNFNVLQALVYAQEVGMCPVDSKGKTFPQLASVRVSLQTLAATFGIPYCLEADFNR 175
The following BLAST results are available for this feature:
BLAST of Gvermi7971.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISU7_9FLOR5.040e-6763.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..178
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:346683..347219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7971.t1Gvermi7971.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 346683..347219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7971.t1 ID=Gvermi7971.t1|Name=Gvermi7971.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=179bp
MKFLLASSFAALIAWTCAQCIRQPVFERWGQLDSSNLVCDGDGGGSSFEV
DANRLTHRTFGPLSPERIDGLPAELIPQTLRLVIRRTESGSINKGASFIL
ADGQRYRFGGGSEQRRMFKEKFNVLQALVWGQERGNCPVDSKGQTFPQLA
SVRISLQTLAATFAVDYCLEAEFRRPLP*
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