Gvermi8044.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8044.t1
Unique NameGvermi8044.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length173
Homology
BLAST of Gvermi8044.t1 vs. uniprot
Match: A0A2V3IHG8_9FLOR (Calcineurin subunit B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHG8_9FLOR)

HSP 1 Score: 216 bits (551), Expect = 2.440e-69
Identity = 110/170 (64.71%), Postives = 133/170 (78.24%), Query Frame = 0
Query:    1 MGANTSALLSDEINEICRHTTLRQHQVKRLYKRFQRLDRAQSGSLDAAALLMVPELAMNPLHPRLLAMLQGANFRQFAALMAAFSASADPARKLDFTFRVYDVDGDGFISPHDLRHILALLVGAHVDRRTVAQLAANVIADADADGDGRISRREFDAAMHVRDLARTLSV 170
            MGANTSALLS+EI EI R T L+Q +VKRLYKRFQ+LDR QSG+LD   LLMVPELAMNPLHPRL++M +  NF+QF   + AFS+ A P+ K+DFTFR+YDVD DGFIS  DL  IL +LVG H+D+RT+  +A  VIADAD DGDGRISR EF  A+ V ++AR L+V
Sbjct:    1 MGANTSALLSEEIEEISRQTNLQQSEVKRLYKRFQQLDRKQSGTLDTRNLLMVPELAMNPLHPRLVSMFENVNFQQFVTNIGAFSSGAQPSTKIDFTFRLYDVDEDGFISSDDLEKILRMLVGDHIDQRTLTDVAVKVIADADTDGDGRISRDEFTTALDVPEVARKLTV 170          
BLAST of Gvermi8044.t1 vs. uniprot
Match: R7QPZ8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPZ8_CHOCR)

HSP 1 Score: 195 bits (495), Expect = 7.980e-61
Identity = 100/171 (58.48%), Postives = 127/171 (74.27%), Query Frame = 0
Query:    1 MGANTSALLSDEINEICRHTTLRQHQVKRLYKRFQRLDRAQSGSLDAAALLMVPELAMNPLHPRLLAMLQGANFRQFAALMAAFSASADPARKLDFTFRVYDVDGDGFISPHDLRHILALLVGAHVDRRTVAQLAANVIADADADGDGRISRREFDAAMHVRDLARTLSVA 171
            MGANTS+LLS+EI+EI R   L + +VKRLYKRFQ+LDR QSG+LDA  LLM+PEL+MNPLHPRLLA+ +  NF +F   +AAFS S    +K+DF F+VYDVD DGFIS HDL  ++ +LVG H+   TV ++ A V+  AD D DGRISR EF +A+ V DLA  L+V+
Sbjct:    1 MGANTSSLLSEEIDEISRQADLPRLEVKRLYKRFQKLDRTQSGTLDADELLMIPELSMNPLHPRLLAVFENVNFHEFVNNIAAFSPSGAEEKKVDFAFKVYDVDADGFISKHDLDTVIRMLVGEHIPDETVQEVVARVVEAADLDKDGRISRSEFTSAVDVADLASRLTVS 171          
BLAST of Gvermi8044.t1 vs. uniprot
Match: A0A1X6PJ38_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJ38_PORUM)

HSP 1 Score: 174 bits (441), Expect = 1.310e-52
Identity = 93/173 (53.76%), Postives = 119/173 (68.79%), Query Frame = 0
Query:    1 MGANTSALLSDEINEICRHTTLRQHQVKRLYKRFQRLDRAQSGSLDAAALLMVPELAMNPLHPRLLAMLQGANFRQFAALMAAFSASADPARKLDFTFRVYDVDGDGFISPHDLRHILALLVGA-HVDRRTVAQLAANVIADADADGDGRISRREFDAAMHVRDLARTLSVAL 172
            MGANTSALL+DEI +I R   L   +V+RLYKRFQ+LDR +SG+L A  L M+PELAMNPL PR++A+   ANF QF   +A F  ++    K DF FRVYDVDGDGFIS  DL  +L ++VG  ++D  T  ++   VI DAD DGD RISR EF  A+ + D+A  ++VAL
Sbjct:    1 MGANTSALLADEIEDISRDCNLTPAEVRRLYKRFQQLDRNRSGNLQAEELRMIPELAMNPLMPRIIALCDNANFSQFVRTIAVFGPNSTKQAKTDFAFRVYDVDGDGFISAADLTQVLHMMVGEDNLDEATTTRIVQKVIDDADTDGDDRISRDEFTLALDLVDIAARMTVAL 173          
BLAST of Gvermi8044.t1 vs. uniprot
Match: UPI001E1DF377 (calcineurin subunit B-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF377)

HSP 1 Score: 174 bits (440), Expect = 1.800e-52
Identity = 88/172 (51.16%), Postives = 120/172 (69.77%), Query Frame = 0
Query:    1 MGANTSALLSDEINEICRHTTLRQHQVKRLYKRFQRLDRAQSGSLDAAALLMVPELAMNPLHPRLLAMLQGANFRQFAALMAAFSASADPARKLDFTFRVYDVDGDGFISPHDLRHILALLVGAHVDRRTVAQLAANVIADADADGDGRISRREFDAAMHVRDLARTLSVAL 172
            MGANTSALLS+EI EI R++ L Q +VKRLYKRFQ+LD  QSG+L+A  L+M+PELAMNPL PR++++    NFR+F   ++ F  +  P  K+DF FRVYDVD DGF+S  DL  +L ++VG ++D  ++ ++   V  DAD D DGRISR EF AA+    +    ++AL
Sbjct:    1 MGANTSALLSEEIEEIARNSNLSQTEVKRLYKRFQKLDSNQSGTLEADELMMIPELAMNPLVPRIVSVFDSVNFREFVQNLSLFGPNGTPQAKIDFAFRVYDVDQDGFVSEDDLSTVLRMMVGDNIDDDSLHRVVQKVFKDADKDNDGRISREEFGAAIDRGTVINLFTIAL 172          
BLAST of Gvermi8044.t1 vs. uniprot
Match: M2XIW7_GALSU (Calcineurin subunit B n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XIW7_GALSU)

HSP 1 Score: 166 bits (421), Expect = 1.370e-49
Identity = 78/170 (45.88%), Postives = 124/170 (72.94%), Query Frame = 0
Query:    1 MGANTSALLSDEINEICRHTTLRQHQVKRLYKRFQRLDRAQSGSLDAAALLMVPELAMNPLHPRLLAMLQGANFRQFAALMAAFSASADPARKLDFTFRVYDVDGDGFISPHDLRHILALLVGAHVDRRTVAQLAANVIADADADGDGRISRREFDAAMHVRDLARTLSV 170
            MGANTSALLS+EI EI + + L   ++KRLYKRFQ+LDR  SG++++  L M+PELAMNPL PR+++M  G NFRQF +L++ FSA++    K+DF FR+YDV+ DG IS +DL  +L ++VG ++D+ T+ ++A   I  +D++ D ++S+ EF + +   D+ +++++
Sbjct:    1 MGANTSALLSEEIEEIAKESHLTSKEIKRLYKRFQKLDRNSSGTIESEELYMIPELAMNPLVPRIVSMFDGVNFRQFVSLLSIFSATSPKQEKIDFAFRIYDVENDGIISVNDLVELLQMMVGNNLDQSTLEEIARATIQASDSNHDDKVSKEEFTSLIEKTDIEQSMTI 170          
BLAST of Gvermi8044.t1 vs. uniprot
Match: A0A7S1TFD7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFD7_9RHOD)

HSP 1 Score: 157 bits (396), Expect = 7.470e-46
Identity = 74/168 (44.05%), Postives = 118/168 (70.24%), Query Frame = 0
Query:    5 TSALLSDEINEICRHTTLRQHQVKRLYKRFQRLDRAQSGSLDAAALLMVPELAMNPLHPRLLAMLQGANFRQFAALMAAFSASADPARKLDFTFRVYDVDGDGFISPHDLRHILALLVGAHVDRRTVAQLAANVIADADADGDGRISRREFDAAMHVRDLARTLSVAL 172
            TS+LL++E+ EI   + L   ++KRLYKRFQ+LDR +SG L+   L M+PELAMNPL PR++ +    NFR+F   ++ F  +A   +K++F FR+YDVDGDGF++  DL  +L ++VG+++    + ++A+ +I  AD+DGDG+ISR +F+ A ++ DLA  +++ L
Sbjct:    1 TSSLLTEEVEEIAEESKLSPQEIKRLYKRFQKLDRNRSGILEPEELTMIPELAMNPLVPRIIMLFDNVNFREFVKHLSVFGPTASAEQKVEFAFRIYDVDGDGFVTRSDLISVLRMMVGSNMTDGALDEVASYLIDGADSDGDGKISRGDFNTACNLNDLATRMTITL 168          
BLAST of Gvermi8044.t1 vs. uniprot
Match: A0A5J4YMN2_PORPP (Calcineurin subunit B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMN2_PORPP)

HSP 1 Score: 157 bits (396), Expect = 8.710e-46
Identity = 78/172 (45.35%), Postives = 117/172 (68.02%), Query Frame = 0
Query:    1 MGANTSALLSDEINEICRHTTLRQHQVKRLYKRFQRLDRAQSGSLDAAALLMVPELAMNPLHPRLLAMLQGANFRQFAALMAAFSASADPARKLDFTFRVYDVDGDGFISPHDLRHILALLVGAHVDRRTVAQLAANVIADADADGDGRISRREFDAAMHVRDLARTLSVAL 172
            MGANTS+L+S++I E+ R + L   ++KRLYKRFQ+LDR QSGSL+A  L M+PELAMNPL PR++ + +  NFR+F  L++ FS SA    K DF FR +D+D DGF+S  DL  IL +L G+++ +  + +++  +I DAD D DG +S  +F A   +  +++   ++L
Sbjct:    1 MGANTSSLVSEDIEEMARESNLSPREIKRLYKRFQKLDRNQSGSLEADELTMIPELAMNPLFPRIVQIFESVNFREFVKLLSVFSESASEEAKRDFVFRFFDIDQDGFVSSTDLIEILLMLCGSNLTQGELEEISQLIIRDADMDKDGMVSYDDFCACDSLGTISQLCQISL 172          
BLAST of Gvermi8044.t1 vs. uniprot
Match: A0A7S2ZD40_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZD40_9RHOD)

HSP 1 Score: 145 bits (367), Expect = 1.400e-41
Identity = 71/143 (49.65%), Postives = 102/143 (71.33%), Query Frame = 0
Query:    1 MGANTSALLSDEINEICRHTTLRQHQVKRLYKRFQRLDRAQSGSLDAAALLMVPELAMNPLHPRLLAMLQGANFRQFAALMAAFSASADPARKLDFTFRVYDVDGDGFISPHDLRHILALLVGAHVDRRTVAQLAANVIADAD 143
            MGANTS+LLS+EI EI R + L    +K LYKRFQ+LDR++SG L A  L M+PELAMNPL PR+ A+L   NFRQF   +   S +A+ + K+DF +R+YDVDGDG ++  DL+ IL ++VG +++  T+ ++   +I++AD
Sbjct:    1 MGANTSSLLSEEIEEIARESNLSARDIKSLYKRFQKLDRSKSGVLSADDLTMIPELAMNPLVPRVTALLHNTNFRQFVNFLGVLSPNAEKSAKIDFAYRIYDVDGDGVVNASDLQTILRMMVGENLNDETLDEITEMIISNAD 143          
BLAST of Gvermi8044.t1 vs. uniprot
Match: CANB1_NAEGR (Calcineurin subunit B n=3 Tax=Naegleria TaxID=5761 RepID=CANB1_NAEGR)

HSP 1 Score: 138 bits (348), Expect = 1.800e-38
Identity = 69/177 (38.98%), Postives = 113/177 (63.84%), Query Frame = 0
Query:    1 MGANTSALLSDEINEICRHTTLRQHQVKRLYKRFQRLDRAQSGSLDAAALLMVPELAMNPLHPRLLAMLQ-----GANFRQFAALMAAFSASADPARKLDFTFRVYDVDGDGFISPHDLRHILALLVGAHVDRRTVAQLAANVIADADADGDGRISRREFDAAMHVRDLARTLSVAL 172
            MG NTS+L  +E+ E+ + T   Q ++K+LYKRF++LD+  +G++     LM+PELA+NPL  R++++         NF++F A ++ F+A  D  RKL+F F+VYD+DGDG+IS  +L  +L ++VG ++    + Q+    I +AD DGDG+IS  EF   +  +DL   +++ L
Sbjct:    1 MGTNTSSLRPEEVEEMQKGTNFTQKEIKKLYKRFKKLDKDGNGTISKDEFLMIPELAVNPLVKRVISIFDENGDGSVNFKEFIAALSVFNAQGDKQRKLEFAFKVYDIDGDGYISNGELFTVLKMMVGNNLSDVQLQQIVDKTILEADEDGDGKISFEEFAKTLSHQDLENKMTIRL 177          
BLAST of Gvermi8044.t1 vs. uniprot
Match: M1VCP2_CYAM1 (Similar to calcineurin B subunit n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VCP2_CYAM1)

HSP 1 Score: 134 bits (337), Expect = 1.200e-36
Identity = 64/141 (45.39%), Postives = 95/141 (67.38%), Query Frame = 0
Query:    1 MGANTSALLSDEINEICRHTTLRQHQVKRLYKRFQRLDRAQSGSLDAAALLMVPELAMNPLHPRLLAMLQGANFRQFAALMAAFSASADPARKLDFTFRVYDVDGDGFISPHDLRHILALLVGAHVDRRTVAQLAANVIAD 141
            MGAN S LL D+I EI   ++  + ++++LY RFQ+LDR  SG++DA+  LM+PELAMNPL PR++ +  G NF++F  L++AF  +A    ++DF FR YDVDGDG +S  D+  I  LLVG ++D  T+ ++    + D
Sbjct:    1 MGANASTLLDDDITEIVASSSFSKDEIEQLYSRFQKLDRNGSGTIDASEFLMIPELAMNPLVPRIVQLFDGVNFKEFVRLLSAFGKNAPREARIDFLFRFYDVDGDGVVSEADVNSIFRLLVGENLDDATLRRIVRQAMLD 141          
The following BLAST results are available for this feature:
BLAST of Gvermi8044.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHG8_9FLOR2.440e-6964.71Calcineurin subunit B n=1 Tax=Gracilariopsis chord... [more]
R7QPZ8_CHOCR7.980e-6158.48Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6PJ38_PORUM1.310e-5253.76Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
UPI001E1DF3771.800e-5251.16calcineurin subunit B-like n=1 Tax=Mercenaria merc... [more]
M2XIW7_GALSU1.370e-4945.88Calcineurin subunit B n=1 Tax=Galdieria sulphurari... [more]
A0A7S1TFD7_9RHOD7.470e-4644.05Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YMN2_PORPP8.710e-4645.35Calcineurin subunit B n=1 Tax=Porphyridium purpure... [more]
A0A7S2ZD40_9RHOD1.400e-4149.65Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
CANB1_NAEGR1.800e-3838.98Calcineurin subunit B n=3 Tax=Naegleria TaxID=5761... [more]
M1VCP2_CYAM11.200e-3645.39Similar to calcineurin B subunit n=1 Tax=Cyanidios... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 134..162
e-value: 0.4
score: 19.7
coord: 93..121
e-value: 1.3E-4
score: 31.3
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 93..159
e-value: 6.5E-10
score: 39.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 89..124
score: 12.839682
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 130..165
score: 10.384886
IPR002048EF-hand domainCDDcd00051EFhcoord: 93..160
e-value: 5.28643E-15
score: 64.1061
NoneNo IPR availableGENE3D1.10.238.10coord: 2..172
e-value: 1.8E-37
score: 130.7
NoneNo IPR availablePANTHERPTHR46002EG:114D9.1 PROTEIN-RELATEDcoord: 1..171
NoneNo IPR availablePANTHERPTHR46002:SF5EG:114D9.1 PROTEIN-RELATEDcoord: 1..171
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 143..155
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 102..114
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 16..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:797077..797595 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8044.t1Gvermi8044.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 797077..797595 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8044.t1 ID=Gvermi8044.t1|Name=Gvermi8044.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=173bp
MGANTSALLSDEINEICRHTTLRQHQVKRLYKRFQRLDRAQSGSLDAAAL
LMVPELAMNPLHPRLLAMLQGANFRQFAALMAAFSASADPARKLDFTFRV
YDVDGDGFISPHDLRHILALLVGAHVDRRTVAQLAANVIADADADGDGRI
SRREFDAAMHVRDLARTLSVAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair