Gvermi8146.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8146.t1
Unique NameGvermi8146.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length251
Homology
BLAST of Gvermi8146.t1 vs. uniprot
Match: A0A2V3J693_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J693_9FLOR)

HSP 1 Score: 269 bits (687), Expect = 1.310e-87
Identity = 140/252 (55.56%), Postives = 182/252 (72.22%), Query Frame = 0
Query:    1 MCEDWFHEKCFVLDVAARKRPHPFDMEYELTCKDCVTVLPLLAEYYEVLTAWKKKKYMKKPKGEKCVRPKNVSVSTKAGTLDYMWRPGFRSYLCRCQECMKFYRSSKVSYLVDKTDFVSPASEDEDSEEYAVPDEENDDDDFEKEILELEEVSEPDSPVS-KVFDDGERIPRKTREVNKSIPSNALVIEPKQANQRTE-PLGVHEIMSIRRRITDFLREAIQTNGGNLNRDSLLRYLSELKAELLSDHVTKT 250
            MCEDWFHEKCF  D   R +  PF  EYELTCKDCV  LP+LAEYYE+L+ WKKK   KK KG  CVRPKNVSV+TKAGTLDYMW PGFR +LC+C+ECM+ Y + K SY+ DK+DFVSP ++DED+++           ++E  ++E+E V EP+ P   KVFD+G RIPRK+          A  IE +++N+ ++ P GV E  +IRRRITDFL+EAIQTNGGNL++D LL+++++LKAE+L DH  +T
Sbjct:    1 MCEDWFHEKCFKCDGIPRSQTSPFAFEYELTCKDCVRNLPVLAEYYELLSVWKKKGSHKKYKGNSCVRPKNVSVATKAGTLDYMWYPGFRLHLCKCEECMELYEAGKASYIADKSDFVSPLTDDEDTDQVXXXXXXXXXXEYE--LIEVE-VEEPEQPERRKVFDEGARIPRKSASGENDTQQKASGIELQRSNRDSKKPSGVQERSAIRRRITDFLKEAIQTNGGNLSQDVLLQFMTDLKAEMLVDHRGQT 249          
BLAST of Gvermi8146.t1 vs. uniprot
Match: A0A2V3J6L0_9FLOR (Protein mlo2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6L0_9FLOR)

HSP 1 Score: 181 bits (458), Expect = 1.800e-51
Identity = 98/238 (41.18%), Postives = 142/238 (59.66%), Query Frame = 0
Query:    1 MCEDWFHEKCFVLDVAARKRPHPFDMEYELTCKDCVTVLPLLAEYYEVLTAWKKKKYMKKPKGEKCVRPKNVSVSTKAGTLDYMWRPGFRSYLCRCQECMKFYRSSKVSYLVDKTDFVSPASEDEDSEEYAVPDEENDDDDFEKEILELEEVSEPDSPVSKVFDDGERIPRKTREVNKSIPSNALVIEPKQANQRTEPLGVHEIMSIRRRITDFLREAIQTNGGNLNRDSLLRYLSEL 238
            MCEDWFHEKC+ L+ +A     P++ EYE  CKDCV +LP+LAEYYE  + WK  +   + +G  CVRPK V +STK GT+DYMW PGFR  LCRC ECM+ Y+ ++V Y+VD+ D ++   E +DSE    P+    D D   ++L   E S     V+          ++ R V K++ S       K+ +   E     + +S R+R+  F++EAI+TNG ++NR+SLL+Y  +L
Sbjct:  123 MCEDWFHEKCYKLEPSANHAT-PYEFEYEFICKDCVKILPILAEYYEYYSVWKDVEIPARNRGATCVRPKKVKLSTKPGTVDYMWVPGFRLDLCRCDECMEKYQEARVLYIVDRHDLLTSYVEADDSELLKGPE---GDVDIVLDLLNEPEESSLSGSVNTPMSTKYAKHKRERSVGKALKSTPHSDAKKRKDSAEEATDPFKALSSRQRVEAFVKEAIRTNGASMNRESLLQYRKDL 356          
BLAST of Gvermi8146.t1 vs. uniprot
Match: R7QQP8_CHOCR (UBR-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQP8_CHOCR)

HSP 1 Score: 166 bits (419), Expect = 8.990e-46
Identity = 100/253 (39.53%), Postives = 140/253 (55.34%), Query Frame = 0
Query:    1 MCEDWFHEKCFVLDVAAR--KRPHP-FDMEYELTCKDCVTVLPLLAEYYEVLTAW-KKKKYMKKP--KGEKCVRPKNVSVSTKAGTLDYMWRPGFRSYLCRCQECMKFYRSSKVSYLVDKTDFVSPASEDEDSEEYAVPDEENDDDDFEKEILELEEVSEPDSPVSKVFDDGERIPRKTREVNKSIPSNALVIEPKQANQRTEPLG----VHEIMSIRRRITDFLREAIQTNGGNLNRDSLLRYLSELKAELL 243
            MCEDWFHE CF  D   R  K  H   D+ YE TC+DCV  LP+L EYYE+   W + K  +K P  +  +C RP N  ++ K G +D++WR GFR  LCRC +C K Y ++  SY++D+ DF+   ++++ S   A  DEE         IL+             V D   R+ RK R  +  + S  +  +P  A+    P+G      EI  IR RI+ FL+E I++NGG++N DSL  YLS+LKA+LL
Sbjct:  129 MCEDWFHENCFKTDSVRRGSKSSHNNLDLVYEFTCRDCVATLPVLTEYYELYNIWGRDKSRIKSPDRRSSRCTRPCNADIALKPGAIDFVWRQGFRLTLCRCTDCCKLYDTAGASYIIDRGDFIGAPAQEDTSILNATNDEE---------ILQ------------DVIDGDWRLSRK-RNRDDVMESEPIPRKPAAASSSASPVGNLLSTEEISDIRSRISYFLKETIESNGGSINPDSLRGYLSDLKADLL 359          
The following BLAST results are available for this feature:
BLAST of Gvermi8146.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J693_9FLOR1.310e-8755.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6L0_9FLOR1.800e-5141.18Protein mlo2 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7QQP8_CHOCR8.990e-4639.53UBR-type domain-containing protein n=1 Tax=Chondru... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040204E3 ubiquitin-protein ligase UBR7PANTHERPTHR13513E3 UBIQUITIN-PROTEIN LIGASE UBR7coord: 1..56
IPR040204E3 ubiquitin-protein ligase UBR7PANTHERPTHR13513E3 UBIQUITIN-PROTEIN LIGASE UBR7coord: 55..141
NoneNo IPR availablePANTHERPTHR13513:SF9E3 UBIQUITIN-PROTEIN LIGASE UBR7-RELATEDcoord: 1..56
NoneNo IPR availablePANTHERPTHR13513:SF9E3 UBIQUITIN-PROTEIN LIGASE UBR7-RELATEDcoord: 55..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:1236312..1237064 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8146.t1Gvermi8146.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 1236312..1237064 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8146.t1 ID=Gvermi8146.t1|Name=Gvermi8146.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=251bp
MCEDWFHEKCFVLDVAARKRPHPFDMEYELTCKDCVTVLPLLAEYYEVLT
AWKKKKYMKKPKGEKCVRPKNVSVSTKAGTLDYMWRPGFRSYLCRCQECM
KFYRSSKVSYLVDKTDFVSPASEDEDSEEYAVPDEENDDDDFEKEILELE
EVSEPDSPVSKVFDDGERIPRKTREVNKSIPSNALVIEPKQANQRTEPLG
VHEIMSIRRRITDFLREAIQTNGGNLNRDSLLRYLSELKAELLSDHVTKT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040204UBR7