Gvermi8854.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8854.t1
Unique NameGvermi8854.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length144
Homology
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BLAST of Gvermi8854.t1 vs. uniprot
Match: A0A2V3IDR6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDR6_9FLOR)

HSP 1 Score: 90.5 bits (223), Expect = 6.100e-20
Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 0 
Query:   62 LKQERAAFKRGVWERKQQQLADRRESVVQLLVNEAPKWITEDTLDKHVEQAVDEFFIEGVADARRDEEALRVSGEV 137
            +KQ+R AFK+  WER+Q+ L ++RESV+ +LV  A  W+TED LD HVE+AVDEFFIEGVADARR+ EA    G V
Sbjct:  111 MKQKRKAFKKAEWERRQKALFEQRESVINMLVEHADTWVTEDNLDNHVERAVDEFFIEGVADARRNSEAQLSGGPV 186
The following BLAST results are available for this feature:
BLAST of Gvermi8854.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IDR6_9FLOR6.100e-2060.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
IPR02614028S ribosomal protein S26PFAMPF14943MRP-S26coord: 1..115
e-value: 2.7E-6
score: 27.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:275776..276305 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8854.t1Gvermi8854.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 275776..276305 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8854.t1 ID=Gvermi8854.t1|Name=Gvermi8854.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=144bp
MHQLRLRFADESRARQESARAQRSVRHSRADDGEHERNARKRERSMQRLQ
EHRERLRRVQQLKQERAAFKRGVWERKQQQLADRRESVVQLLVNEAPKWI
TEDTLDKHVEQAVDEFFIEGVADARRDEEALRVSGEVGGPVAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026140MRPS26