Gvermi8839.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8839.t1
Unique NameGvermi8839.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length251
Homology
BLAST of Gvermi8839.t1 vs. uniprot
Match: A0A2V3ITL5_9FLOR (PsbP domain-containing protein 2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITL5_9FLOR)

HSP 1 Score: 286 bits (731), Expect = 5.540e-95
Identity = 144/189 (76.19%), Postives = 160/189 (84.66%), Query Frame = 0
Query:   62 DRRAFLHLVALAAFSALPLSEAAFAEQPSFQTYNGPISLGFSFTYPSNWNVKKKPIKTHLSEVLITSDADAATTAGLVVDSVKIPSIESFGTPRQVGEKVLAVETKKESVNSATIVSTSSETKNGLTYYTLDYTVDSSRGVKRYIAKVTVTGGQLYVLTTQAKLDNFDDQTRQTFAKMLDSFTVKKQYT 250
            DRR FLHL AL+AFS LP+S+  FAEQ  F TY GPISLGFSF YPSNW VKKKPIKTHLSEV++TSD D ATTAGLVVD+VKI +IE FGTP  VG KV+ VETKKE+VNSAT+ S SSETK+GL YYTLDYTVDSSRGVKRY+AKVTVTGGQLYVLT QA++D FD +T + F KMLDSF VKKQYT
Sbjct:   14 DRRTFLHLAALSAFSVLPISDGVFAEQTEFSTYMGPISLGFSFAYPSNWAVKKKPIKTHLSEVIVTSDKDPATTAGLVVDTVKIDTIEKFGTPEVVGNKVVQVETKKENVNSATVQSASSETKDGLVYYTLDYTVDSSRGVKRYLAKVTVTGGQLYVLTAQARVDKFDKETSENFDKMLDSFNVKKQYT 202          
BLAST of Gvermi8839.t1 vs. uniprot
Match: A0A7S0BSD6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BSD6_9RHOD)

HSP 1 Score: 141 bits (355), Expect = 7.190e-38
Identity = 75/163 (46.01%), Postives = 104/163 (63.80%), Query Frame = 0
Query:   87 EQPSFQTYNGPISLGFSFTYPSNWNVKKKPIKTHLSEVLITSDADAATTAGLVVDSVKIPSIESFGTPRQVGEKVLAVETKKESVNSATIVSTSSETKNGLTYYTLDYTVDSSRGVKRYIAKVTVTGGQLYVLTTQAKLDNFDDQTRQTFAKMLDSFTVKKQY 249
            E+ S   + GP SLG++F YP  W   KK IKTH SEVL+  D  +A   GLVVD VKI S++ FG+P QV +KVL VE KK+   S   ++  S  ++GLTYY ++Y V+++RG+KRYI+++T+    LYV T QAK+ +F     +   K+L S  VKK Y
Sbjct:   58 EETSELVWKGPSSLGYTFKYPPAWTATKKQIKTHASEVLVVKDGTSAQV-GLVVDPVKINSLKEFGSPEQVADKVLGVEKKKDGTLSVRTLALGSFDRDGLTYYDIEYEVENTRGMKRYISRLTINDKNLYVFTGQAKIADFSSSEAE-LRKVLSSLYVKKSY 218          
BLAST of Gvermi8839.t1 vs. uniprot
Match: A0A7S0XME8_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XME8_9RHOD)

HSP 1 Score: 139 bits (349), Expect = 5.980e-37
Identity = 75/173 (43.35%), Postives = 110/173 (63.58%), Query Frame = 0
Query:   82 EAAFAEQPSFQTYNGPISLGFSFTYPSNWNVKKKPIKTHLSEVLIT----SDADAATTAGLVVDSVKIPSIESFGTPRQVGEKVLAVETKKESVNSATIVSTSSETKNGLTYYTLDYTVDSSRG-VKRYIAKVTVTGGQLYVLTTQAKLDNFDDQTRQTFAKMLDSFTVKKQY 249
            EAA   Q  F  Y GP+ LG+SF YP+ W+V KK +KTH++E++++    S+       G+VVD VKI S+  FG+   VG +V+ +E KK+ V+SA++VS     K+GLTYY L+Y +D+S G  K ++A  T+TG  LYVLTTQA+  +F+  +      ++ SF VK QY
Sbjct:   49 EAAPVVQQEFTRYQGPLGLGYSFEYPTGWSVGKKTVKTHMNELVMSPAKKSEGAVRGGGGIVVDPVKINSVSEFGSADAVGNRVIELEKKKDGVSSASLVSAKELQKDGLTYYELEYVIDTSHGGEKHFLAASTITGKNLYVLTTQARTADFN-ASEPALRHVISSFRVKPQY 220          
BLAST of Gvermi8839.t1 vs. uniprot
Match: A0A1X6PDH3_PORUM (PsbP domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PDH3_PORUM)

HSP 1 Score: 137 bits (346), Expect = 8.940e-35
Identity = 76/156 (48.72%), Postives = 99/156 (63.46%), Query Frame = 0
Query:   94 YNGPISLGFSFTYPSNWNVKKKPIKTHLSEVLITSDADAATTAGLVVDS-VKIPSIESFGTPRQVGEKVLAVETKKESVNSATIVSTSSETK-------------------NGLTYYTLDYTVDSSRGVKRYIAKVTVTGGQLYVLTTQAKLDNFD 229
            Y GP+SLG+SF YP+ W+  KKPIKTHLSEV++++   ++ + GLVVD  +KI SIE FGTP  VG KVLA+E KK+S     +V T+SET                    NG+ Y  ++Y VDSSRGVK ++AK TV  GQLYV+T   K D F+
Sbjct:  226 YVGPLSLGYSFRYPTTWSANKKPIKTHLSEVIVSAPKGSSASVGLVVDGPLKIGSIEEFGTPDAVGAKVLALERKKDSTKDVRLVRTASETLGVGGGAAAAAGVGQPAGLGNGVAYI-VEYVVDSSRGVKHFVAKATVAAGQLYVMTATCKEDEFE 380          
BLAST of Gvermi8839.t1 vs. uniprot
Match: A0A7S0QHT9_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHT9_9CRYP)

HSP 1 Score: 126 bits (317), Expect = 9.410e-33
Identity = 59/128 (46.09%), Postives = 89/128 (69.53%), Query Frame = 0
Query:  101 GFSFTYPSNWNVKKKPIKTHLSEVLITSDADAATTAGLVVDSVKIPSIESFGTPRQVGEKVLAVETKKESVNSATIVSTSSETKNGLTYYTLDYTVDSSRGVKRYIAKVTVTGGQLYVLTTQAKLDNF 228
            GFS  YP+ W   +KP+KTHL EV + SD    T  G+ VD VKI ++ +FGTP QVG++V+A+E  K+ V SA +++   E ++G+ YYT++Y  +S+RG +R++AKV +   +L+VLT QAK D+F
Sbjct:   30 GFSVDYPAAWRASQKPVKTHLEEVNLLSDTSKGTELGVSVDPVKIDTVTAFGTPLQVGKRVVALERSKDGVLSAKLIAVGQEDRDGVPYYTIEYASESTRGNRRFLAKVAIVRRRLFVLTAQAKTDSF 157          
BLAST of Gvermi8839.t1 vs. uniprot
Match: A0A7J7IQB6_9RHOD (PsbP domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQB6_9RHOD)

HSP 1 Score: 125 bits (315), Expect = 2.010e-31
Identity = 77/175 (44.00%), Postives = 109/175 (62.29%), Query Frame = 0
Query:   78 LPLSEAAFAEQPSFQT-YNGP-ISLGFSFTYPSNWNVKKKPIKTHLSEVLITSDADAATTAGLVVDSVKIPSIESFGTPRQVGEKVLAVETKKESVNSATIVSTSS---ETKNGLTYYTLDYTVDSSRGVKR-YIAKVTVTGGQLYVLTTQAKLDNFDDQTRQTFAKMLDSFTVK 246
            LP S A  +  P   T Y+    S G  F YPS W V+ KPIKTH  E+L+  D + +T+ G+V DSV+I  IE+FGT   +GE+V+A+E KK+ V SA +V  +    + +N LTYY  +Y V+S+RG +R Y AKVT+TG QLYV+T Q+K +N        F  +L+SF ++
Sbjct:   89 LPASGADESASPVADTVYDATNASTGVRFRYPSGWRVRTKPIKTHAFEILVVCDTEPSTSIGVVSDSVRIERIENFGTASDIGERVVALERKKDGVLSAELVRATQYPVKDRNPLTYYLCEYRVNSARGGERHYAAKVTITGKQLYVMTVQSK-ENQWGFYEPLFRDVLESFEIE 262          
BLAST of Gvermi8839.t1 vs. uniprot
Match: A0A7S4FYE0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FYE0_9EUGL)

HSP 1 Score: 120 bits (300), Expect = 1.920e-28
Identity = 73/185 (39.46%), Postives = 104/185 (56.22%), Query Frame = 0
Query:   63 RRAFL--HLVALAAFSALPLSEAAFAEQPSFQTYNGPISLGFSFTYPSNWNVKKKPIKTHLSEVLITSDADAATTAGLVVDSVKIPSIESFGTPRQVGEKVLAVETKKESVNSATIVSTSSETKNGLTYYTLDYTVDSSRGVKRYIAKVTVTGGQLYVLTTQAKLDNFDDQTRQTFAKMLDSFTV 245
            RRA L   L A AA +  P    A  +  + Q  NG     ++F YPS+W V KKP+KTH  E+ + S      T G+ VD +K+ S+E FG P  V E+V+ VE  K  V    ++  ++  ++GL+YYT++Y VDS RG   Y+AK+TV  G LYVLT + K D   ++ R    K+LD+  V
Sbjct:  172 RRAVLLGALPAAAALATPPRMAFAAEDLTTAQVDNGR----WAFDYPSDWEVIKKPLKTHFQELEVKSPTIKKCTVGIAVDPIKLASLEKFGDPTFVAERVVNVERNKNGVREVKLLDAANAPRDGLSYYTMEYEVDSERGYYHYLAKLTVANGFLYVLTAKVK-DGSWEEGRPAVQKILDTMQV 351          
BLAST of Gvermi8839.t1 vs. uniprot
Match: A0A0M0JKI9_9EUKA (PsbP domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JKI9_9EUKA)

HSP 1 Score: 111 bits (278), Expect = 2.620e-26
Identity = 69/176 (39.20%), Postives = 99/176 (56.25%), Query Frame = 0
Query:   76 SALPLSEAAFAEQPSFQTYNGPISLGFSFTYPSNWNVKKKPIKTHLSEVLITSDADAATTAGLVVDSVKIPSIESFGTPRQVGEKVLAVETKKESVNSATIVSTSSETKNGL----TYYTLDYTVDSSRGVKRYIAKVTVTGGQLYVLTTQAKLDNFD--DQTRQTFAKMLDSFTV 245
            +ALPL+E A  E             G+   YP++W    KP+KTHL E L++S        G+ VD V I S+E+FGT  QV E+VLAVET ++ VNS  + + +++  +      +YYT++Y  DSSRG K +  K  + G +LYVL  QAKLD+FD  +  R     ++ SF V
Sbjct:   68 TALPLAELADKE------------FGYRLEYPADWKAAGKPVKTHLHEALLSSPG--GLKLGVTVDPVVIDSLEAFGTLDQVTERVLAVETTRDGVNSVILRTNAAQAADAARRTPSYYTIEYATDSSRGKKLFSCKYCIAGRRLYVLQLQAKLDDFDGDEAVRAQVRSIVGSFEV 229          
BLAST of Gvermi8839.t1 vs. uniprot
Match: A0A7S2WW61_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW61_9STRA)

HSP 1 Score: 110 bits (275), Expect = 6.270e-26
Identity = 54/128 (42.19%), Postives = 84/128 (65.62%), Query Frame = 0
Query:  102 FSFTYPSNWNVKKKPIKTHLSEVLITSDADAATTAGLVVDSVKIPSIESFGTPRQVGEKVLAVETKKESVNSATIVSTS-SETKNGLTYYTLDYTVDSSRGVKRYIAKVTVTGGQLYVLTTQAKLDNF 228
            + F+YP+ + V  KP+KTHL EV + S+A    +AGL VD +KIPS+E+FG P  VG +V+ VE +K+ V SA +V    ++   G+ YY LDY  +S+RG  R+++++ +  G+L+V T Q K  +F
Sbjct:   83 YEFSYPAGFAVTSKPLKTHLVEVNVKSEAVRGYSAGLAVDPIKIPSLEAFGDPTTVGNRVVGVERRKDGVLSADLVGAERAQDARGIVYYDLDYVAESTRGNNRFLSRIAIREGKLHVFTVQTKQADF 210          
BLAST of Gvermi8839.t1 vs. uniprot
Match: A0A7S0LET4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LET4_9EUKA)

HSP 1 Score: 109 bits (273), Expect = 9.720e-26
Identity = 74/200 (37.00%), Postives = 117/200 (58.50%), Query Frame = 0
Query:   49 SSGQPASSDSGKTDRRAFLHLVALAAFSALPLSEAAFAEQPSFQTYNGPISLGFSFTYPSNWNVKKKPIKTHLSEVLITSDADAATTAGLVVDSVKIPSIESFGTPRQVGEKVLAVETKKESVNSATIVSTSSETKNGLTYYTLDYTVDSSRGVKRYIAKVTVTGGQLYVLTTQAKLDNFDD---QTRQTFAKMLDSFTV 245
            S+  PA++   ++  R  L L++ A  +  PL + A A + S +T      L +S +YPS WN  +KP+KTHLSE L+ S     +  G+ VD VKI S+E+FGTP +V ++VLAVE  ++ V    + S +++     +YYT++Y V+S+RG K Y+ K  +   +LYVL TQAK+ ++D      +Q    ++ SF V
Sbjct:   19 STAAPAATRLDESVLRRSL-LISAAVLAGSPLVQRAIALETS-ETLADERFL-YSLSYPSGWNPTQKPVKTHLSEALLNSPRKGVSL-GVTVDPVKIDSLEAFGTPEEVADRVLAVEEGRDGVLDVQLRSLAADAGKP-SYYTIEYFVESTRGKKVYLCKYCIAQKRLYVLQTQAKVVDYDSAASDVQQQLRAIVASFRV 213          
The following BLAST results are available for this feature:
BLAST of Gvermi8839.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITL5_9FLOR5.540e-9576.19PsbP domain-containing protein 2, chloroplastic n=... [more]
A0A7S0BSD6_9RHOD7.190e-3846.01Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0XME8_9RHOD5.980e-3743.35Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A1X6PDH3_PORUM8.940e-3548.72PsbP domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S0QHT9_9CRYP9.410e-3346.09Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7J7IQB6_9RHOD2.010e-3144.00PsbP domain-containing protein n=1 Tax=Cyanidiococ... [more]
A0A7S4FYE0_9EUGL1.920e-2839.46Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A0M0JKI9_9EUKA2.620e-2639.20PsbP domain-containing protein n=1 Tax=Chrysochrom... [more]
A0A7S2WW61_9STRA6.270e-2642.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0LET4_9EUKA9.720e-2637.00Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 79..245
e-value: 5.0E-35
score: 122.9
NoneNo IPR availablePANTHERPTHR31407:SF3PSBP DOMAIN-CONTAINING PROTEIN 2, CHLOROPLASTICcoord: 43..246
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 43..246
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 91..245
e-value: 8.2E-25
score: 87.7
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 101..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:239859..240611 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8839.t1Gvermi8839.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 239859..240611 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8839.t1 ID=Gvermi8839.t1|Name=Gvermi8839.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=251bp
MSPSSAFISNNFRLLPSKNNLICSPQTAPRTTPPAKPSRLRRAVACMNSS
GQPASSDSGKTDRRAFLHLVALAAFSALPLSEAAFAEQPSFQTYNGPISL
GFSFTYPSNWNVKKKPIKTHLSEVLITSDADAATTAGLVVDSVKIPSIES
FGTPRQVGEKVLAVETKKESVNSATIVSTSSETKNGLTYYTLDYTVDSSR
GVKRYIAKVTVTGGQLYVLTTQAKLDNFDDQTRQTFAKMLDSFTVKKQYT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP_C
IPR016123Mog1/PsbP_a/b/a-sand