Gvermi4378.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4378.t1
Unique NameGvermi4378.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length187
Homology
BLAST of Gvermi4378.t1 vs. uniprot
Match: A0A2V3IIM9_9FLOR (Histone chaperone ASF1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIM9_9FLOR)

HSP 1 Score: 319 bits (817), Expect = 2.200e-109
Identity = 155/187 (82.89%), Postives = 174/187 (93.05%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKQDIEWKVIYVGCAEDESHDQQLDAVLLPADNAGRFMFVLQVDAPNPALIPPSDVLGVTIVLLTCSYDGAEFIRVGYYVSNQYTDAELHEAPPAKPLIHRIQRTVAAHEPRVTKFPHKFDFCQPPAGTPAEPELSADASRFASPL-DRRANVA 186
            MAAVDIFDVKVLDNPAP+TNPLQFEITYDVRE+LK+DIEWKVIYVG AEDESHDQ+LDAVLLPADN GRFMFVLQVD+PNP+LIP SDVLGVTIVLLTCSY+GAEFIRVGYYVSNQYTDA+LHE PP KPL+++IQRT+AAHEPRVTKFPHKFDF +P  GTPAEPELS D S FA+ + +++AN+A
Sbjct:    1 MAAVDIFDVKVLDNPAPYTNPLQFEITYDVRETLKEDIEWKVIYVGSAEDESHDQELDAVLLPADNTGRFMFVLQVDSPNPSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDADLHENPPPKPLVNKIQRTIAAHEPRVTKFPHKFDFREPKTGTPAEPELSTDGSHFATGVANQQANLA 187          
BLAST of Gvermi4378.t1 vs. uniprot
Match: R7QHB1_CHOCR (Similar to anti-silencing factor n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHB1_CHOCR)

HSP 1 Score: 276 bits (705), Expect = 2.540e-92
Identity = 133/177 (75.14%), Postives = 153/177 (86.44%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKQDIEWKVIYVGCAEDESHDQQLDAVLLPADNAGRFMFVLQVDAPNPALIPPSDVLGVTIVLLTCSYDGAEFIRVGYYVSNQYTDAELHEAPPAKPLIHRIQRTVAAHEPRVTKFPHKFDFCQPPAGTPAEPELSADASRFAS 177
            MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRE+LK+DIEWKVIYVG AED+S DQ+LD+VL+PA+  GRF FVLQVD PNPA IP SD+ GVTIVLLTCSY+ AEF+RVGYYVSN+Y   EL+E PP+KP+I +I RT+AA +PRVTKFPHKFDF QP  GT A+PELS D + FA+
Sbjct:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVREALKEDIEWKVIYVGSAEDQSRDQELDSVLVPAEAQGRFKFVLQVDPPNPAKIPDSDIAGVTIVLLTCSYENAEFVRVGYYVSNEYPTPELNENPPSKPIIDQITRTIAATDPRVTKFPHKFDFSQPLQGTSADPELSTDGAHFAA 177          
BLAST of Gvermi4378.t1 vs. uniprot
Match: UPI001E1D949C (probable histone chaperone ASF1A n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D949C)

HSP 1 Score: 235 bits (600), Expect = 8.790e-76
Identity = 126/205 (61.46%), Postives = 144/205 (70.24%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKQDIEWKVIYVGCAEDESHDQQLDAVLLPADNAGRFMFVLQVDAPNPALIPPSDVLGVTIVLLTCSYDGAEFIRVGYYVSNQYTDAELHEAPPAK---------------------------------PLIHRIQRTVAAHEPRVTKFPHKFDFCQP-PAGTPAEPELSAD 171
            MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRE LK+DIEW+V+YVG AED++ DQ+LDAVLLPAD  GRF FVLQV  P+ + IP +D+LGVTIVLLTCSY+GAEFIRVGYYV+N++ D      PPA+                                 P I RI RT+AA EPR+TKFPH FDF QP P GT A+PELS D
Sbjct:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVREPLKEDIEWQVVYVGSAEDQTQDQELDAVLLPADTMGRFKFVLQVPPPDSSRIPAADILGVTIVLLTCSYNGAEFIRVGYYVNNEHPDFLPAPEPPAEDADDDMDTDDVVGSKRVELVSKPQPGASPPTSAPDIARITRTIAAAEPRITKFPHAFDFTQPVPTGTLADPELSGD 205          
BLAST of Gvermi4378.t1 vs. uniprot
Match: A0A5J4Z2L2_PORPP (Histone chaperone ASF1B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2L2_PORPP)

HSP 1 Score: 225 bits (573), Expect = 1.620e-70
Identity = 109/155 (70.32%), Postives = 126/155 (81.29%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKQDIEWKVIYVGCAEDESHDQQLDAVLLPADNAGRFMFVLQVDAPNPALIPPSDVLGVTIVLLTCSYDGAEFIRVGYYVSNQYTDAELHEAPPAKPLIHRIQRTVAAHEPRVTKFPHKFDF 155
            MAAVDI +V VL+NPA FT+P+QFEITY+VRE+L+ DIEWKV YVG AEDES+DQ LD VLLPAD  GRF FVLQVDAP   L+P  DVLGVTI+LL+CSY   EFIRVGYYV+N+Y D EL E PPA  L+H+I R + A +PRVTKFPHKFDF
Sbjct:    1 MAAVDIVNVSVLENPATFTSPIQFEITYEVREALEDDIEWKVTYVGSAEDESYDQDLDVVLLPADAVGRFGFVLQVDAPKFELLPEEDVLGVTIILLSCSYKDKEFIRVGYYVNNEYVDPELAENPPAHALVHKIVRNIGADQPRVTKFPHKFDF 155          
BLAST of Gvermi4378.t1 vs. uniprot
Match: A0A7S0ZH16_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZH16_9RHOD)

HSP 1 Score: 218 bits (554), Expect = 4.040e-69
Identity = 105/155 (67.74%), Postives = 125/155 (80.65%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKQDIEWKVIYVGCAEDESHDQQLDAVLLPADNAGRFMFVLQVDAPNPALIPPSDVLGVTIVLLTCSYDGAEFIRVGYYVSNQYTDAELHEAPPAKPLIHRIQRTVAAHEPRVTKFPHKFDF 155
            MAAVDIF+V VLDNPA F +PL FEITY+VRE L +DIEWKV+YVG AEDES+DQ+L++VLLPAD  GRF FVLQVDAP    +P  D+LGVT++LL+CSY   EFIRVGYYV+N+YTD EL E PPA P I ++ R + A +PRVTKF HKFDF
Sbjct:    1 MAAVDIFNVNVLDNPALFMHPLSFEITYEVREPLIEDIEWKVVYVGSAEDESYDQELESVLLPADTMGRFGFVLQVDAPRVEKLPVDDILGVTVILLSCSYKEKEFIRVGYYVNNEYTDPELIENPPATPQIDKLYRNIGADQPRVTKFAHKFDF 155          
BLAST of Gvermi4378.t1 vs. uniprot
Match: M2W1D3_GALSU (Histone chaperone ASF1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W1D3_GALSU)

HSP 1 Score: 202 bits (515), Expect = 3.060e-63
Identity = 96/154 (62.34%), Postives = 119/154 (77.27%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKQDIEWKVIYVGCAEDESHDQQLDAVLLPADNAGRFMFVLQVDAPNPALIPPSDVLGVTIVLLTCSYDGAEFIRVGYYVSNQYTDAELHEAPPAKPLIHRIQRTVAAHEPRVTKFPHKFD 154
            M+AV++  V VL+NP  F +P +FEITY+VRE+L+QDIEWKVIYV CA+DES DQ LD VLLPAD  GRF F L+V APNP  IP  D+LG+T VL+TCSY   EFIR+GYY++N+Y DAE++E PP  PL+ RI+R + A EPRVT F H FD
Sbjct:    1 MSAVEVLQVDVLNNPGFFGDPFRFEITYEVREALQQDIEWKVIYVSCAKDESLDQVLDEVLLPADTVGRFQFTLEVAAPNPNKIPDDDLLGITAVLITCSYRDQEFIRIGYYLNNEYEDAEMNENPPCPPLLERIRRHIFAEEPRVTHFLHSFD 154          
BLAST of Gvermi4378.t1 vs. uniprot
Match: A0A1S4DUI4_CUCME (probable histone chaperone ASF1A n=2 Tax=Cucumis melo TaxID=3656 RepID=A0A1S4DUI4_CUCME)

HSP 1 Score: 196 bits (499), Expect = 6.560e-61
Identity = 98/184 (53.26%), Postives = 127/184 (69.02%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKQDIEWKVIYVGCAEDESHDQQLDAVLLPADNAGRFMFVLQVDAPNPALIPPSDVLGVTIVLLTCSYDGAEFIRVGYYVSNQYTDAELHEAPPAKPLIHRIQRTVAAHEPRVTKFPHKF------DFCQPPAGTPAEPELSADASRFASP 178
            M+AV+I +V VLDNP+PF+ PLQFEI+Y+   +LK D+EWK+IYVG AE E++DQ L+ VL+   N G + FVLQ D P+P+ IP  D++GVT++LLTCSY G EFIRVGYYV+N Y D +L E PPAK LI R+QR + + +PRVTKFP  F         +PP+  P   E   D    ASP
Sbjct:    1 MSAVNITNVAVLDNPSPFSTPLQFEISYECLSALKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDGDEQLLASP 184          
BLAST of Gvermi4378.t1 vs. uniprot
Match: A0A384AVI8_BALAS (histone chaperone ASF1A n=1 Tax=Balaenoptera acutorostrata scammoni TaxID=310752 RepID=A0A384AVI8_BALAS)

HSP 1 Score: 192 bits (488), Expect = 8.480e-60
Identity = 90/150 (60.00%), Postives = 113/150 (75.33%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKQDIEWKVIYVGCAEDESHDQQLDAVLLPADNAGRFMFVLQVDAPNPALIPPSDVLGVTIVLLTCSYDGAEFIRVGYYVSNQYTDAELHEAPPAKPLIHRIQRTVAAHEPRVTKFP 150
            MA V + +V VLDNP+PF NP QFEIT++  E L +D+EWK+IYVG AE E +DQ LD+VL+    AGR MFV Q DAPNP LIP +D +GVT+VL+TC+Y G EFIRVGYYV+N+YT+ EL E PP KP   ++QR + A  PRVT+FP
Sbjct:    1 MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRVTRFP 150          
BLAST of Gvermi4378.t1 vs. uniprot
Match: A0A5A9N8H2_9TELE (Histone chaperone asf1b-A n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9N8H2_9TELE)

HSP 1 Score: 195 bits (496), Expect = 1.450e-59
Identity = 92/156 (58.97%), Postives = 116/156 (74.36%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKQDIEWKVIYVGCAEDESHDQQLDAVLLPADNAGRFMFVLQVDAPNPALIPPSDVLGVTIVLLTCSYDGAEFIRVGYYVSNQYTDAELHEAPPAKPLIHRIQRTVAAHEPRVTKFPHKFDFC 156
            MA V + +V VLDNP+PF NP QFEIT++  E L +D+EWK+IYVG AE E HDQ LD+VL+    AGR MFV Q +APN ALIP SD +GVT+VL+TC+Y G EFIR+GYYV+N+YTDAEL E PP KP   ++QR + A  PRVT+F   ++ C
Sbjct:   63 MAKVQVLNVAVLDNPSPFGNPFQFEITFECMEDLPEDLEWKIIYVGSAESEEHDQTLDSVLVGPVPAGRHMFVFQAEAPNSALIPESDAVGVTVVLITCTYRGQEFIRIGYYVNNEYTDAELRENPPLKPNYGQLQRNILASNPRVTRFHINWEGC 218          
BLAST of Gvermi4378.t1 vs. uniprot
Match: A0A8C4QHT1_EPTBU (Anti-silencing function 1Ba histone chaperone n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QHT1_EPTBU)

HSP 1 Score: 193 bits (490), Expect = 1.680e-59
Identity = 90/154 (58.44%), Postives = 116/154 (75.32%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKQDIEWKVIYVGCAEDESHDQQLDAVLLPADNAGRFMFVLQVDAPNPALIPPSDVLGVTIVLLTCSYDGAEFIRVGYYVSNQYTDAELHEAPPAKPLIHRIQRTVAAHEPRVTKFPHKFD 154
            MA V + +V VLDNP+PF NP QFEIT++  E+L +D+EWK++YVG AE E +DQ LD+VL+    AGR MFV Q DAPNP LIP +D +GVT+VL+TC+Y G EFIRVGYYV+N+YTD EL E PP KP+  ++QR + A  PRVT+F   +D
Sbjct:    1 MAKVQVNNVVVLDNPSPFLNPFQFEITFECVENLPEDLEWKIVYVGSAESEDYDQILDSVLVGPVPAGRHMFVFQADAPNPELIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTDPELRENPPVKPIYDKLQRNILASNPRVTRFQINWD 154          
The following BLAST results are available for this feature:
BLAST of Gvermi4378.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIM9_9FLOR2.200e-10982.89Histone chaperone ASF1 n=1 Tax=Gracilariopsis chor... [more]
R7QHB1_CHOCR2.540e-9275.14Similar to anti-silencing factor n=1 Tax=Chondrus ... [more]
UPI001E1D949C8.790e-7661.46probable histone chaperone ASF1A n=1 Tax=Mercenari... [more]
A0A5J4Z2L2_PORPP1.620e-7070.32Histone chaperone ASF1B n=1 Tax=Porphyridium purpu... [more]
A0A7S0ZH16_9RHOD4.040e-6967.74Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M2W1D3_GALSU3.060e-6362.34Histone chaperone ASF1 n=1 Tax=Galdieria sulphurar... [more]
A0A1S4DUI4_CUCME6.560e-6153.26probable histone chaperone ASF1A n=2 Tax=Cucumis m... [more]
A0A384AVI8_BALAS8.480e-6060.00histone chaperone ASF1A n=1 Tax=Balaenoptera acuto... [more]
A0A5A9N8H2_9TELE1.450e-5958.97Histone chaperone asf1b-A n=1 Tax=Triplophysa tibe... [more]
A0A8C4QHT1_EPTBU1.680e-5958.44Anti-silencing function 1Ba histone chaperone n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006818Histone chaperone ASF1-likePFAMPF04729ASF1_hist_chapcoord: 1..154
e-value: 2.7E-58
score: 196.2
IPR006818Histone chaperone ASF1-likePANTHERPTHR12040ANTI-SILENCING PROTEIN 1coord: 1..157
IPR036747Histone chaperone ASF1-like superfamilyGENE3D2.60.40.1490coord: 1..156
e-value: 4.2E-63
score: 213.8
IPR036747Histone chaperone ASF1-like superfamilySUPERFAMILY101546ASF1-likecoord: 1..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1408268..1408937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4378.t1Gvermi4378.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1408268..1408937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4378.t1 ID=Gvermi4378.t1|Name=Gvermi4378.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=187bp
MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKQDIEWKVIYVGCAED
ESHDQQLDAVLLPADNAGRFMFVLQVDAPNPALIPPSDVLGVTIVLLTCS
YDGAEFIRVGYYVSNQYTDAELHEAPPAKPLIHRIQRTVAAHEPRVTKFP
HKFDFCQPPAGTPAEPELSADASRFASPLDRRANVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006818ASF1-like
IPR036747ASF1-like_sf