Gvermi8851.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8851.t1
Unique NameGvermi8851.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1103
Homology
BLAST of Gvermi8851.t1 vs. uniprot
Match: A0A2V3IDP6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDP6_9FLOR)

HSP 1 Score: 617 bits (1591), Expect = 3.410e-198
Identity = 531/1150 (46.17%), Postives = 662/1150 (57.57%), Query Frame = 0
Query:   11 SQTDPITSDPYVIYQLRKPSQRGTAVIPRFVPNTHAPAFSPANYRFARVWATDTSIPLFQAPRSFEFAPSLGSESTIWSDTSSYLSLSTLRTAPSERPSLLHAT-QQPIFLPRRASLAHSPTPSDFNADPHFKYPSALSESVDEDAVVDDLLASMNTPQFPQLRNAPSPHRSNALIHPDPRPMHRSNVRSSRAVRN------------------------HHHH----RPILGSLLPSITKKRRSLWQWLFCSDTTAASTAVPSASTSNAAREITHAPPAPNRRAPA---PRVRNAHDAPPSKQSGSKHRGQSLERSSRSSSDKHHTAR-APWNFLAKGLLSRDRSK----SRDRRAGGSDRKRDGHRPFKHTTSTKDLAADSQRTKQNRIVFQKTAAKTPRAEKHASTHRAKRKDIHGGKTHHLKTDSSQNGASRSHRARTEKNDNRSKPEQSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXRPGAQQIPNNVVHSAMNKGKVPSIIDHAAAAAKSHGDMQRMPSADSADPVTSRISSDLSSSTYGKTSRSDSGQSPLLRKADYRTVSLQEEDPKASAIGSDVSSLISGGLEKRASPVPYASYQS---PVRSPNAPPENLSGGVSVGPQPYRPASPKFPGVSLKNGALVKDSQRPTSLKESTNLPIHSSKKGMSTTGGMSVPYRKLEAAGSLPRQKSRERPA-GGTLSQHSSLLFDA--DDTASTGLTSLADESVSTHKSVSTRMSALNEDFPFVVETDAQAVDEPRAAAAAGTKGVEYQSLMASEGLFTQKPIFQNSALVLNTRVSPSFESSTTSPRYHSDWSHPHATPIDVFCQCSCTCVYEEECRRKCELMYERSSSASSSSRSRQGYRGFTSLPPAIHTNGMRIEQIMRQE---AASGQDFSDPRVIEAMPSRRNSTQRRLARASEVDELPDLYTSQLKK------DASLYPRPSDAEPAPYSQTGDPWQGRSGTSNLHQGPALRNLS----------NRNVPHKRHQPSRPRTGGEIAAVAVETDAAKANQVSGLKPPNTRRYSSNSSSHHSCDNE---GSRKAHARRRGRHSVGAQ-EQIAKRRAGDVGFDQAMGGRSGSHSYPRTA 1094
            SQ++  ++DPYV+YQLRKP+QRGTAVIPRFVPNTHAPAFSPANYRFARVWATD + PLF APRSFE+ PSLGSES+ WS+TSSY+SLSTLRTAPSERP LLH + QQPIFLPR     H P+P +FN  PHF YP+ALS+S+DEDAVVDDLLA+M+ P +P L+NAPS   + + +H    P H +   SS   RN                        H  H    R +  SLLP++T+KRRSLWQWLFCS+TTA S AVPS ++S   R+ +  P   + R PA    R  + H    SK   ++   ++LE++   S  +  + R + W+FL   LL+RDR +    S   +      K++                  Q +  NRI FQ              T   K+KD    + HH +           +R                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX  R   Q        SA+ K  V  I +  A  A  HG M+R+ S+DSADPVTSRISSDLSSSTYGK S SDS  SP  +K   +  S+ +    A+ IGSDVSS +SGG+ K  SPVPY +YQS   PV S  AP  N +  V   P   RP  P+FP +S +NG L+K+ ++        ++   + KKGMS   G S     LE+ G++  QKS  R + GGT+S   + L      DTASTGLTSLADESVST KSVSTR SA N+ FPFV+E    A    RA A    +  E  S    +    +KPIFQNSA+  N  VSPS  SS++S R+HSDWS PHAT IDVFCQCSC+CVYEEECRR CEL+Y RSSS SSSSRSRQGY GFTSLPPAIH+NGMR++ I   +   +++GQ  +  + I  M  R    QRRL RA+EVDELPD Y    +       DA+L      +    Y+   D WQ  +G + L   P L   +          +R   +  H  +R   G       V   +  +NQ S  KPP  R +++     HS D+    G++       G  +   + E+ A+RR G     +     SGSHSYPR +
Sbjct:    7 SQSEATSTDPYVVYQLRKPNQRGTAVIPRFVPNTHAPAFSPANYRFARVWATDAATPLFNAPRSFEYTPSLGSESSHWSETSSYMSLSTLRTAPSERPPLLHPSHQQPIFLPRTLPNPH-PSPPNFNMSPHFHYPTALSQSLDEDAVVDDLLANMHNPHYPTLQNAPS---TTSALHAKQPPAHATTHHSSSTTRNTPRPAPHRAHAHXXXXXGTTPPSTHSSHSSQPRQLFASLLPALTRKRRSLWQWLFCSNTTAVSVAVPSIASSYTTRDPSQLPS--SNRLPANTHTRQTHLHHTSSSKPPAARKHARTLEKARAHSQPRTSSTRPSRWDFLTNNLLTRDRPRGHTASTTHKRSTRAAKQNXXXXXXXXXXXXXXTTAVQNS--NRIGFQHVLGAH---NDQTHTQSVKQKDHRPQRAHHNQQQXXXXXXXXPNRQ-----------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRTTPQSAAGTAARSALKKSNV--IENTTAGNAAPHGVMRRVASSDSADPVTSRISSDLSSSTYGKQSVSDSTHSPAPKK---KGASVHDMFMPANGIGSDVSSQVSGGMGK-VSPVPYPNYQSTAMPVSS-KAPLFNTNSNVQQVPSSLRPPLPRFPNLSAQNGPLLKEPKQAPGFIPPQSISASNPKKGMSMASGASGLSPALES-GNIANQKSLSRSSTGGTISFRGARLESELEMDTASTGLTSLADESVSTQKSVSTRASAYNDQFPFVMEIPTSA----RALAEQVARDFESNST-TPDNYRNRKPIFQNSAIAFNAVVSPSHASSSSSKRFHSDWSDPHATVIDVFCQCSCSCVYEEECRRTCELIYGRSSSVSSSSRSRQGYHGFTSLPPAIHSNGMRMQSIQMAQNGNSSAGQGSAIQQNIPVMSKREARVQRRLVRANEVDELPDPYVQIPRNANGTSGDAALL-----SSTNAYAHGHDTWQPTTGAAGL---PVLSPATAVPTANQSELSRRAEYSSHVTNRNGQG------RVGRTSMNSNQASARKPPGRRPHTAGGLPRHSYDDALQYGTQPRRTECSGEDTAPPRKEENARRRGGSSDGPRHAKSVSGSHSYPRAS 1107          
The following BLAST results are available for this feature:
BLAST of Gvermi8851.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IDP6_9FLOR3.410e-19846.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 695..714
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..640
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 868..887
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 410..494
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..393
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 937..1008
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 965..986
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..348
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1023..1042
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 537..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1020..1102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..577
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..626

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:268147..271455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8851.t1Gvermi8851.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 268147..271455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8851.t1 ID=Gvermi8851.t1|Name=Gvermi8851.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1103bp
MTTTAPPPPPSQTDPITSDPYVIYQLRKPSQRGTAVIPRFVPNTHAPAFS
PANYRFARVWATDTSIPLFQAPRSFEFAPSLGSESTIWSDTSSYLSLSTL
RTAPSERPSLLHATQQPIFLPRRASLAHSPTPSDFNADPHFKYPSALSES
VDEDAVVDDLLASMNTPQFPQLRNAPSPHRSNALIHPDPRPMHRSNVRSS
RAVRNHHHHRPILGSLLPSITKKRRSLWQWLFCSDTTAASTAVPSASTSN
AAREITHAPPAPNRRAPAPRVRNAHDAPPSKQSGSKHRGQSLERSSRSSS
DKHHTARAPWNFLAKGLLSRDRSKSRDRRAGGSDRKRDGHRPFKHTTSTK
DLAADSQRTKQNRIVFQKTAAKTPRAEKHASTHRAKRKDIHGGKTHHLKT
DSSQNGASRSHRARTEKNDNRSKPEQSHLDRSRSERHRSDRSNIEKDKSP
SKSPRPRNEHNSNEIRKEDRPRVERARADRPKQISPRKDRPRRPGAQQIP
NNVVHSAMNKGKVPSIIDHAAAAAKSHGDMQRMPSADSADPVTSRISSDL
SSSTYGKTSRSDSGQSPLLRKADYRTVSLQEEDPKASAIGSDVSSLISGG
LEKRASPVPYASYQSPVRSPNAPPENLSGGVSVGPQPYRPASPKFPGVSL
KNGALVKDSQRPTSLKESTNLPIHSSKKGMSTTGGMSVPYRKLEAAGSLP
RQKSRERPAGGTLSQHSSLLFDADDTASTGLTSLADESVSTHKSVSTRMS
ALNEDFPFVVETDAQAVDEPRAAAAAGTKGVEYQSLMASEGLFTQKPIFQ
NSALVLNTRVSPSFESSTTSPRYHSDWSHPHATPIDVFCQCSCTCVYEEE
CRRKCELMYERSSSASSSSRSRQGYRGFTSLPPAIHTNGMRIEQIMRQEA
ASGQDFSDPRVIEAMPSRRNSTQRRLARASEVDELPDLYTSQLKKDASLY
PRPSDAEPAPYSQTGDPWQGRSGTSNLHQGPALRNLSNRNVPHKRHQPSR
PRTGGEIAAVAVETDAAKANQVSGLKPPNTRRYSSNSSSHHSCDNEGSRK
AHARRRGRHSVGAQEQIAKRRAGDVGFDQAMGGRSGSHSYPRTAHLSQIQ
AL*
back to top