Gvermi8859.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8859.t1
Unique NameGvermi8859.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length174
Homology
BLAST of Gvermi8859.t1 vs. uniprot
Match: A0A2V3J2B3_9FLOR (Peptidylprolyl isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2B3_9FLOR)

HSP 1 Score: 226 bits (577), Expect = 3.320e-73
Identity = 117/177 (66.10%), Postives = 144/177 (81.36%), Query Frame = 0
Query:    1 MILAAL---SCTTPSAVLAYSSPYKPSENESKPLPERLYDAKAR-STVKLPSGLEYFDLTVGGGEEAKRNSQVWIYYTTRLRGLNGIKLDSSYDEKLPSAFSFRVGEDNVVEGLSELVEGMQVGGKRRGVLPPQIAYRSVEQRPVVRDFFAKRRLLSVLETKRDATIVFDVELVKLR 173
            M+LAA    S    +A L+YSSPY+PSE + K LPERLYD++A+ S V+LPSG+EYFDL  G G +A+  SQV +YYT+RLRGLNGIKLDSSYD+K  + F+FRVGE +VV GLSE+V GMQVGGKRR VLPP +AY++ + RP V++FFA+RRLLSVLET RDATIVFDVEL+KLR
Sbjct:    1 MLLAAAAICSANQATAALSYSSPYRPSETDVKTLPERLYDSRAKESIVRLPSGIEYFDLARGTGAQAENGSQVSVYYTSRLRGLNGIKLDSSYDDKYATPFNFRVGEADVVPGLSEMVVGMQVGGKRRAVLPPSVAYKNADMRPKVKEFFARRRLLSVLETSRDATIVFDVELIKLR 177          
BLAST of Gvermi8859.t1 vs. uniprot
Match: M2Y884_GALSU (Peptidylprolyl isomerase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y884_GALSU)

HSP 1 Score: 117 bits (293), Expect = 2.680e-29
Identity = 64/143 (44.76%), Postives = 88/143 (61.54%), Query Frame = 0
Query:   36 YDAKARSTVKLPSGLEYFDLTVGGGEEAKRNSQVWIYYTTRLRGLNGIKLDSSYDEKLPS---AFSFRVGEDN---VVEGLSELVEGMQVGGKRRGVLPPQIAYRSVEQRPVVRDFFAKRRLLSVLETKRDATIVFDVELVKL 172
            +D +   T++ PSGL+YFD+  G G   K N  + + YT+RL+GLNG KL+SS D ++       S    ED     V G  E +  M+ GGKRR ++PP IAY S+++ P    + A+RRLLSVL T RD TIVFD+EL K+
Sbjct:   99 FDKEKHQTIRTPSGLQYFDIKCGEGPLPKANDLLVVRYTSRLQGLNGWKLESSEDHEIDGFSEPLSILYNEDTKKLFVPGFWEALSTMRPGGKRRAIVPPNIAYHSIDEEPRPISWDARRRLLSVLNTNRDKTIVFDIELQKI 241          
BLAST of Gvermi8859.t1 vs. uniprot
Match: A0A1X6PJ60_PORUM (Peptidylprolyl isomerase n=3 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJ60_PORUM)

HSP 1 Score: 115 bits (288), Expect = 2.900e-28
Identity = 80/195 (41.03%), Postives = 106/195 (54.36%), Query Frame = 0
Query:    2 ILAALSCTTPSAVLAYSSPYKPSENESKPLPERLYDAKARSTVKLPSGLEYFDLTVGGGEEAKR-----NSQVWIYYTTRLRGLNGIKLDSSYDEK---LPSAFSFRVGEDNVVEGLSELVEGMQVGGKRRGVLPPQIAYRSVEQRPVVRD---------------FFAKRRLLSVLETKRDATIVFDVELVKLR 173
            ++A  +   P    AYSS  +   + S   P R YD      VK  SG+ Y DL++G G + +        +V IY+T+RL G NGI LDS+ D K   L   F F +G+  VV GL E++  M+VGGKRR VLPP I Y++   +P   D               F + RRL SVLET RDATIVFDVEL+K++
Sbjct:   91 LVAVGAAAAPRPAAAYSS--RTQNDLSNASPTR-YDGSKE--VKTESGMRYLDLSLGEGADEELLPLVDGDRVTIYFTSRLWGYNGIVLDSTNDHKRDGLAEPFVFTMGDAAVVPGLQEMIRTMRVGGKRRAVLPPSIGYQTATMKPTPVDVRLPPGLVGPFSAASFPSMRRLRSVLETSRDATIVFDVELLKVK 280          
BLAST of Gvermi8859.t1 vs. uniprot
Match: A0A7W1Z2V8_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nitrospirales bacterium TaxID=2358460 RepID=A0A7W1Z2V8_9BACT)

HSP 1 Score: 83.6 bits (205), Expect = 2.540e-17
Identity = 55/136 (40.44%), Postives = 75/136 (55.15%), Query Frame = 0
Query:   38 AKARSTVKLPSGLEYFDLTVGGGEEAKRNSQVWIYYTTRLRGLNGIKLDSSYDEKLPSAFSFRVGEDNVVEGLSELVEGMQVGGKRRGVLPPQIAYRSVEQRPVVRDFFAKRRLLSVLETKRDATIVFDVELVKLR 173
            A  +STV   SGL+Y DL +G G EA       ++YT  L   +G K DSS D   P  FSFR+G  +V++G  E VEGM +GG R+ V+PPQ+ Y S             R   S +    +AT++F+VEL+ LR
Sbjct:   32 AAEKSTVTTTSGLQYVDLALGTGREAHAGETAIVHYTGTLT--DGTKFDSSKDRNSP--FSFRLGAGSVIKGWDEGVEGMNIGGIRKLVIPPQLGYGS-------------RGAGSAVPP--NATLIFEVELLDLR 148          
BLAST of Gvermi8859.t1 vs. uniprot
Match: A0A522FUM8_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A522FUM8_9BACT)

HSP 1 Score: 80.9 bits (198), Expect = 2.660e-16
Identity = 47/130 (36.15%), Postives = 74/130 (56.92%), Query Frame = 0
Query:   44 VKLPSGLEYFDLTVGGGEEAKRNSQVWIYYTTRLRGLNGIKLDSSYDEKLPSAFSFRVGEDNVVEGLSELVEGMQVGGKRRGVLPPQIAYRSVEQRPVVRDFFAKRRLLSVLETKRDATIVFDVELVKLR 173
            +  PSGL+Y D+  G G EAK  ++V ++Y   L   +G K DSS D   P  FSF +G  NV++G  E V GM++GGKR+ V+PP +AY S                 ++ +   ++T++F+VEL+ ++
Sbjct:   37 ITTPSGLQYEDIITGTGTEAKSGNKVTVHYVGTLT--DGTKFDSSKDRGQP--FSFNLGAGNVIKGWDEGVAGMKIGGKRKLVIPPDLAYGS----------------RAIGKIPANSTLIFEVELLDIK 146          
BLAST of Gvermi8859.t1 vs. uniprot
Match: A0A533Y3U2_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A533Y3U2_9BACT)

HSP 1 Score: 80.5 bits (197), Expect = 3.930e-16
Identity = 53/134 (39.55%), Postives = 71/134 (52.99%), Query Frame = 0
Query:   40 ARSTVKLPSGLEYFDLTVGGGEEAKRNSQVWIYYTTRLRGLNGIKLDSSYDEKLPSAFSFRVGEDNVVEGLSELVEGMQVGGKRRGVLPPQIAYRSVEQRPVVRDFFAKRRLLSVLETKRDATIVFDVELVKLR 173
            A   V   SGL+Y DL VG G +AKR     ++Y   L   +G K DSS D K P  FSFRVG   V++G  E V  M+VGGKR+  +PPQ+ Y +     ++                 +AT+ FDVEL++LR
Sbjct:   34 AGQVVTTESGLQYLDLVVGTGRQAKRGDTATVHYIGWLA--DGKKFDSSVDRKEP--FSFRVGAGQVIKGWDEGVGTMKVGGKRKLTIPPQLGYGTRGAGHIIPP---------------NATLTFDVELLELR 148          
BLAST of Gvermi8859.t1 vs. uniprot
Match: A0A1M5R787_9BURK (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Massilia TaxID=149698 RepID=A0A1M5R787_9BURK)

HSP 1 Score: 79.0 bits (193), Expect = 7.280e-16
Identity = 50/131 (38.17%), Postives = 68/131 (51.91%), Query Frame = 0
Query:   42 STVKLPSGLEYFDLTVGGGEEAKRNSQVWIYYTTRLR---GLNGIKLDSSYDEKLPSAFSFRVGEDNVVEGLSELVEGMQVGGKRRGVLPPQIAYRSVEQRPVVRDFFAKRRLLSVLETKRDATIVFDVEL 169
            ST+   SGL+Y ++TVGGG EAK    V ++YT  LR   G  G K DSS D   P  F F +G   V+ G  E V+GM++GG RR  +P  + Y +     V+                 +AT++FDVEL
Sbjct:    2 STITTDSGLQYEEITVGGGAEAKAGQHVTVHYTGWLRNDDGTQGAKFDSSKDRNDP--FQFSLGAGQVIRGWDEGVQGMKIGGLRRLTIPASLGYGARGAGGVIPP---------------NATLIFDVEL 115          
BLAST of Gvermi8859.t1 vs. uniprot
Match: A0A7C7WSF0_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A7C7WSF0_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 1.470e-15
Identity = 52/129 (40.31%), Postives = 69/129 (53.49%), Query Frame = 0
Query:   45 KLPSGLEYFDLTVGGGEEAKRNSQVWIYYTTRLRGLNGIKLDSSYDEKLPSAFSFRVGEDNVVEGLSELVEGMQVGGKRRGVLPPQIAYRSVEQRPVVRDFFAKRRLLSVLETKRDATIVFDVELVKLR 173
            K  SGLEY DL VG G   K+  +V ++YT  L+  NG K DSS D   P  F F+VG   V+ G  E V  M+VGGKR+ ++PP +AY                R  +      DAT+VF+VEL+ L+
Sbjct:   37 KTASGLEYIDLVVGKGAHPKKGQRVLVHYTGWLK--NGDKFDSSVDRGEP--FEFQVGVGQVIRGWDEGVMTMRVGGKRKLIIPPDLAYG---------------RRGAGRSIPPDATLVFEVELLNLK 146          
BLAST of Gvermi8859.t1 vs. uniprot
Match: A0A239GHL6_9BURK (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Noviherbaspirillum TaxID=1344552 RepID=A0A239GHL6_9BURK)

HSP 1 Score: 77.8 bits (190), Expect = 2.040e-15
Identity = 50/131 (38.17%), Postives = 72/131 (54.96%), Query Frame = 0
Query:   42 STVKLPSGLEYFDLTVGGGEEAKRNSQVWIYYTTRLR---GLNGIKLDSSYDEKLPSAFSFRVGEDNVVEGLSELVEGMQVGGKRRGVLPPQIAYRSVEQRPVVRDFFAKRRLLSVLETKRDATIVFDVEL 169
            ST    SGL+Y D+TVG G+EAK  + V ++YT  L+   G  G K DSS D   P  F F +G  +V++G  E V+GM+VGG+RR ++P  + Y +     V+                 +AT++FDVEL
Sbjct:    2 STTTTASGLQYEDVTVGSGDEAKAGNHVTVHYTGWLQNPDGTPGRKFDSSKDRNDP--FQFPLGAGHVIKGWDEGVQGMKVGGQRRLIIPAALGYGARGAGGVIPP---------------NATLIFDVEL 115          
BLAST of Gvermi8859.t1 vs. uniprot
Match: A0A7X4C9B9_9BACT (Peptidyl-prolyl cis-trans isomerase n=4 Tax=unclassified Nitrospira TaxID=2652172 RepID=A0A7X4C9B9_9BACT)

HSP 1 Score: 77.4 bits (189), Expect = 5.620e-15
Identity = 49/130 (37.69%), Postives = 72/130 (55.38%), Query Frame = 0
Query:   44 VKLPSGLEYFDLTVGGGEEAKRNSQVWIYYTTRLRGLNGIKLDSSYDEKLPSAFSFRVGEDNVVEGLSELVEGMQVGGKRRGVLPPQIAYRSVEQRPVVRDFFAKRRLLSVLETKRDATIVFDVELVKLR 173
            VK+ SGL+Y DL  G G EA      +++YT  L+  +G K DSS D   P  FSFR+G   V++G  E V GM +G KR+ ++PP + Y S             R +  ++    +AT++F+VEL+ LR
Sbjct:   35 VKMSSGLQYVDLVTGDGREAHVGETAFVHYTGWLK--DGTKFDSSVDRGEP--FSFRLGAGRVIKGWDEGVVGMNIGTKRKLIIPPDLGYGS-------------RGVGRIIPP--NATLIFEVELLDLR 145          
The following BLAST results are available for this feature:
BLAST of Gvermi8859.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2B3_9FLOR3.320e-7366.10Peptidylprolyl isomerase n=1 Tax=Gracilariopsis ch... [more]
M2Y884_GALSU2.680e-2944.76Peptidylprolyl isomerase n=1 Tax=Galdieria sulphur... [more]
A0A1X6PJ60_PORUM2.900e-2841.03Peptidylprolyl isomerase n=3 Tax=Porphyra umbilica... [more]
A0A7W1Z2V8_9BACT2.540e-1740.44Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nitros... [more]
A0A522FUM8_9BACT2.660e-1636.15Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bacter... [more]
A0A533Y3U2_9BACT3.930e-1639.55Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nitros... [more]
A0A1M5R787_9BURK7.280e-1638.17Peptidyl-prolyl cis-trans isomerase n=4 Tax=Massil... [more]
A0A7C7WSF0_9BACT1.470e-1540.31Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nitros... [more]
A0A239GHL6_9BURK2.040e-1538.17Peptidyl-prolyl cis-trans isomerase n=3 Tax=Novihe... [more]
A0A7X4C9B9_9BACT5.620e-1537.69Peptidyl-prolyl cis-trans isomerase n=4 Tax=unclas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 61..170
e-value: 2.2E-16
score: 59.9
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 66..173
score: 16.991444
NoneNo IPR availableGENE3D3.10.50.40coord: 30..172
e-value: 1.1E-25
score: 92.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 25..172
IPR044197Peptidyl-prolyl cis-trans isomerase FKBP17-1-likePANTHERPTHR47860PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTICcoord: 45..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:286771..287381 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8859.t1Gvermi8859.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 286771..287381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8859.t1 ID=Gvermi8859.t1|Name=Gvermi8859.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=174bp
MILAALSCTTPSAVLAYSSPYKPSENESKPLPERLYDAKARSTVKLPSGL
EYFDLTVGGGEEAKRNSQVWIYYTTRLRGLNGIKLDSSYDEKLPSAFSFR
VGEDNVVEGLSELVEGMQVGGKRRGVLPPQIAYRSVEQRPVVRDFFAKRR
LLSVLETKRDATIVFDVELVKLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom
IPR044197FKBP17-1-like