Gvermi2063.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi2063.t1
Unique NameGvermi2063.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length297
Homology
BLAST of Gvermi2063.t1 vs. uniprot
Match: A0A0G4J392_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J392_PLABS)

HSP 1 Score: 99.8 bits (247), Expect = 1.330e-22
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 0
Query:    4 SGILVDIVGVEAGDRGRSCEDHDVCGSILKHDVLVRIHAVQI-NASGTEETALAVYWVTDGIDRCRVGFLPRHLIKHKAQYDGKLAQIVEKLS 95
            S + V+IV +E G+RGR C++H +CGS+L+ D +VR+  VQI N +G  ETA+A+Y V +G D+C VGFLPRH I    ++D +LA++VE  S
Sbjct:    2 SSVHVEIVRIEIGNRGRCCQEHTLCGSVLEPDSIVRLRIVQIINDAGNTETAIAIYRVRNGTDQCLVGFLPRHYIARANRFDNRLARVVELYS 94          
BLAST of Gvermi2063.t1 vs. uniprot
Match: A0A3P3YGF6_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YGF6_PLABS)

HSP 1 Score: 97.1 bits (240), Expect = 2.320e-19
Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 0
Query:    6 ILVDIVGVEAGDRGRSCEDHDVCGSILKHDVLVRIHAVQI-NASGTEETALAVYWVTDGIDRCRVGFLPRHLIKHKAQYDGKLAQIVEKLS 95
            I  +  G+E G+RGR C++H VCGS+L+ D +VR+  VQI N +G  ETA+AVY V +G D+C VGFLPRH I    ++D +LA++VE  S
Sbjct:  260 IRPEFQGIEIGNRGRCCQEHTVCGSVLEPDSIVRLRIVQIINDAGNTETAIAVYRVRNGSDQCLVGFLPRHYIARANRFDNRLARVVELYS 350          
BLAST of Gvermi2063.t1 vs. uniprot
Match: A0A0H5QX17_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QX17_9EUKA)

HSP 1 Score: 79.3 bits (194), Expect = 8.240e-15
Identity = 37/90 (41.11%), Postives = 56/90 (62.22%), Query Frame = 0
Query:    9 DIVGVEAGDRGRSCEDHDVCGSILKHDVLVRI-HAVQINASGTEETALAVYWVTDGIDRCRVGFLPRHLI-KHKAQYDGKLAQIVEKLSD 96
            +IVG+     GRSCE H VCG  L+ ++LV   H +   + GT E  +A Y + DG+  CRVGFLPR+++ + K  Y+ K AQI++  ++
Sbjct:    8 EIVGLHDASNGRSCESHRVCGEYLESEMLVLFKHTILCTSEGTVENGVACYRIRDGVQSCRVGFLPRNIVARSKDDYEDKFAQILQLYNE 97          
BLAST of Gvermi2063.t1 vs. uniprot
Match: A0A6A4BSB0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4BSB0_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.300e-14
Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    8 VDIVGVEAGDRGRSCEDHDVCGSILKHD--VLVRIHAVQINASGTEETALAVYWVTDGIDRCRVGFLPRHLIKHKAQYDGKLAQIVEKL 94
            VDIVG +AGD GRSC  HDVCG  LK D  ++ R  AV  + +G  E A+  Y +  G   C VGFLPR L++ +  Y+ K+A +VE L
Sbjct:   12 VDIVGCDAGDAGRSCTVHDVCGKHLKIDDAIVFRGEAVMAD-NGDVEYAVKAYVIRLGAQLCHVGFLPRRLLRQRTAYENKMATVVEDL 99          
BLAST of Gvermi2063.t1 vs. uniprot
Match: A0A0H5R227_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R227_9EUKA)

HSP 1 Score: 62.8 bits (151), Expect = 1.130e-8
Identity = 31/84 (36.90%), Postives = 46/84 (54.76%), Query Frame = 0
Query:    9 DIVGVEAGDRGRSCEDHDVCGSILKHDVLVRIHAVQINASGTEETALAVYWVTDGIDRCRVGFLPRHLIKHKAQYDGKLAQIVE 92
            +IVG+     GRSC  HD+CGS +  D L+R+    +        ALA   + +G + CRVGFLP+     + ++ GK AQ+ E
Sbjct:   17 EIVGLYERGNGRSCNRHDICGSQVGFDSLIRVKLTIVEVPEGFREALACVLIENGQESCRVGFLPKSYDGIRDRFLGKFAQVCE 100          
BLAST of Gvermi2063.t1 vs. uniprot
Match: A0A0A9YRQ9_LYGHE (Ketol-acid reductoisomerase (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YRQ9_LYGHE)

HSP 1 Score: 62.4 bits (150), Expect = 1.150e-8
Identity = 31/71 (43.66%), Postives = 41/71 (57.75%), Query Frame = 0
Query:  226 DQKWQRRWKKVAQLRATLYMVPSGKVGRQFVANLAREFKGVRDRTWNSERPLMYAALILQSTPGVRKSCDI 296
            +Q W++RW K  +L+   Y +P G VGRQFVA L  E KGV + T  SER  +  A +LQ   G+    DI
Sbjct:   27 NQIWEQRWLKAMRLQGKQYALPQGAVGRQFVALLTGEIKGVAEGTQTSERIFILCATVLQRERGISSGEDI 97          
BLAST of Gvermi2063.t1 vs. uniprot
Match: A0A0H5R5X4_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R5X4_9EUKA)

HSP 1 Score: 60.1 bits (144), Expect = 6.820e-8
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    3 PSGILVDIVGVEAGDRGRSCEDHDVCGSILKHDVLVRIHAVQINASGT 50
            PSG+ V+I+G+E G+RGRSCE HDVCG+ L  D +VRI  + +   GT
Sbjct:   40 PSGVTVEILGMEMGNRGRSCEYHDVCGAALHIDAVVRIRPIVVLNGGT 87          
The following BLAST results are available for this feature:
BLAST of Gvermi2063.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A0G4J392_PLABS1.330e-2249.46Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A3P3YGF6_PLABS2.320e-1950.55Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A0H5QX17_9EUKA8.240e-1541.11Uncharacterized protein n=1 Tax=Spongospora subter... [more]
A0A6A4BSB0_9STRA1.300e-1447.19Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A0H5R227_9EUKA1.130e-836.90Uncharacterized protein (Fragment) n=1 Tax=Spongos... [more]
A0A0A9YRQ9_LYGHE1.150e-843.66Ketol-acid reductoisomerase (Fragment) n=1 Tax=Lyg... [more]
A0A0H5R5X4_9EUKA6.820e-854.17Uncharacterized protein (Fragment) n=1 Tax=Spongos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_191contigScGOVlb_191:17702..20307 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi2063.t1Gvermi2063.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_191 17702..20307 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi2063.t1 ID=Gvermi2063.t1|Name=Gvermi2063.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=297bp
MRPSGILVDIVGVEAGDRGRSCEDHDVCGSILKHDVLVRIHAVQINASGT
EETALAVYWVTDGIDRCRVGFLPRHLIKHKAQYDGKLAQIVEKLSDFFDS
FVQFVEFVLHWNDTLVGEQRLIFPLNKITDRLAPPPPDVEADHGSALLPG
NGQQPPHPAQVNETGVGDHTAAAAAEEPLVFTFTPDVGADLDGYVPTESD
ERLATVYGDHLHDNDGCHLDGGIQDDQKWQRRWKKVAQLRATLYMVPSGK
VGRQFVANLAREFKGVRDRTWNSERPLMYAALILQSTPGVRKSCDI*
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