Gvermi6144.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6144.t1
Unique NameGvermi6144.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length444
Homology
BLAST of Gvermi6144.t1 vs. uniprot
Match: A0A2V3III8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III8_9FLOR)

HSP 1 Score: 449 bits (1156), Expect = 1.380e-152
Identity = 241/441 (54.65%), Postives = 318/441 (72.11%), Query Frame = 0
Query:    8 DSISILVHPNDLSGARHNGMRKENRFWRRTCCRIWRRVSVEAAPALVRDTVFYAPDELHDAAFPARTPTQFIKTTPHSPNLVRQGDDFEISFVGMNVSPQDIPAWNKNELLLYSLSNANAGSRSQWVRKMQSADGQAVNMENGYLVSSRVRNEADSSEPK--KVGSLNCINAPNMPLKQGDVPLIHFDPLRCGQIHGTEPNSYVTIPASTALYKQFKAQDTVDEKADEQDVSVRFKVLDLDRVNDNQLQVISGLTQVGELVEKGAVAVPYAELISSAFQAAAMVGKRGLQKYSAPDQVFSVDERFRLAEPAKTNGSVQSGSQS---GAARSAPNKNDNYLRYGYYFFLEKSVDAKLYSQTRSSSHYVPLLLRRVDLRKRRRKRNDLEYFPLTNVSYVVMRVLPGCAESIQEQKQAMFAADRKRLYTILQAENISGALMRDK 443
            +SISILVHPNDL G+ +NG+RK NRF RRTC R WRRVSVEAAPA+VRD VFYAPDE H     +RT TQ+I+ TP   NLV++GD+FEISFVGMN+SPQD+ A NKNEL+LYSL++ +  ++ +W +K+ SA+   VNM+NG++VS +V    D S+PK  +V S++    P +   Q DVP IH+D    G+  GT+PN++V IPAS A+YKQF+ +     + D+ D+SVRF+VLD+D+V+D Q++ + G+TQ+G+ VEKGAVA+PYAEL++ AFQA A +GKRGL+KYSAPD V  VD +FRLA     N  + +G  S   G   +      NYLRYGYYFFLEK+VDAKLY QTRSS+  VPLLLRR D   +  +RN+LE+FP+TNVSYVVM+V P C   ++EQK A+  A ++RL  ILQ  NI   L ++K
Sbjct:    9 NSISILVHPNDLKGSANNGLRKGNRFSRRTCFRRWRRVSVEAAPAMVRDRVFYAPDESHKPESTSRTATQYIRITPDVDNLVKKGDEFEISFVGMNISPQDLFACNKNELVLYSLTSGSDSAKCEWAQKISSANSLKVNMQNGFVVSDQVA--PDQSQPKIRRVASIDSRLNPALSTYQKDVPFIHYDTEGDGRTTGTKPNTFVPIPASKAVYKQFR-RSCRRREIDDDDISVRFEVLDIDKVSDEQIEAVFGITQLGDFVEKGAVALPYAELVARAFQAVAAIGKRGLRKYSAPDHVLPVDMKFRLA-----NSHMPAGDDSKSKGTNVTEHTSRANYLRYGYYFFLEKNVDAKLYVQTRSSAQNVPLLLRRTDFDAKCAQRNELEWFPMTNVSYVVMKVSPACTSGLEEQKMALCKAHKQRLDAILQVGNILEMLEKNK 441          
BLAST of Gvermi6144.t1 vs. uniprot
Match: A0A2V3ID24_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID24_9FLOR)

HSP 1 Score: 209 bits (533), Expect = 6.100e-59
Identity = 153/443 (34.54%), Postives = 230/443 (51.92%), Query Frame = 0
Query:   10 ISILVHPNDLSGARHNGMRKENRFWRRTCCRI--WRRVSVEAAPALVRDTVFYAPDELHDAAFPARTP-TQFIKTTPHS-PNLVRQGDDFEISFVGMNVSPQDIPAWNKNELLLYSLSNANAGSRSQWVRKMQSADGQAVNMENGYLVSSRVRNEADSSEPKKVGSLN----------------CINAPN-MPLKQGDVPLIHFDPLRCGQIHGTEPNSYVTIPASTALYKQFKAQ-DTVDEKADEQDVSVRFKVLDLDRVNDNQLQVISGLTQVGELVEKGAVAVPYAELISSAFQAAAMVGKRGLQKYSAPDQVFSVDERFRLAEPAKTNGSVQSGSQSGAARSAPNKNDNYLRYGYYFFLEKSVDAKLYSQTRSSSHYVPLLLRRVDLRKRRRKRNDLEYFPLTNVSYVVMRVLPGCAESIQEQKQAMFAADRKRLYTIL 430
            ISI+V    L  A  + +RK +  W   C  +   RRV VEA+     D++ +AP+  +      R   T+FIK   ++  ++VR  DDFE+SF+G++V+ QD      NE+LL SL  A      + +  + S+    +N  N  + + +   E D +    VG  N                  + P  +P++ GDV  +HFDP   G   G+EP+++  IP +  L+ Q +    T+ E  + +DVS+RF V+++D++N+ QL  I  L +V + V K A +VP  + IS   + A  VG+  L+K + PD V S D  F LAEP      V S       R    +  NYLRYGYYFFL   VDAKL++QT +S+H V LL++    R +    N+ EYFPL+ VSYVV++V  GC+    +Q+  MFA    RL  +L
Sbjct:   23 ISIIVLRKSLQSATSDSLRKRD--WHERCLPLPTRRRVFVEASEYGTADSILFAPERPNANESHQRVAATEFIKVNQNTCSDVVRHDDDFEVSFIGLSVAQQDYIG--DNEMLLCSL--ARREDHQEVLEYLASSAYSTINSSNSSVDAHKNGTEEDVAVRSDVGKTNERDGVVPIPPKQKTVDLSDLPTALPIRPGDVTFLHFDPETDGHDTGSEPDTFTPIPGTKRLFIQRRGSASTLAEGGNVRDVSIRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPILKFISWLLKFANTVGRSALKKVARPDHVMSSDVSFMLAEPE-----VSSNDGRTIQRE---EYGNYLRYGYYFFLFSPVDAKLHAQTDASTHNVQLLIKHHGYRAKMANLNEKEYFPLSGVSYVVIKVTRGCSPCDNKQRSEMFARHLGRLTQLL 451          
BLAST of Gvermi6144.t1 vs. uniprot
Match: A0A2V3IEE2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEE2_9FLOR)

HSP 1 Score: 181 bits (458), Expect = 5.740e-49
Identity = 119/371 (32.08%), Postives = 189/371 (50.94%), Query Frame = 0
Query:   80 KTTPHSPNLVRQGDDFEISFVGMNVSPQD-IPAWNK----NELLLYSLSNA-NAGSRSQWVRKMQSADGQAVNMENGYLVSSR---VRNEADSSEPKKVGSLNCINAPNMPLKQGDVPLIHFDPLRCGQIHGTEPNSYVTIPASTALY-------KQFKAQDTVDEKADEQDVSVRFKVLDLDRVNDNQLQVISGLTQVGELVEKGAVAVPYAELISSAFQAAAMVGKRGLQKYSAPDQVFSVDERFRLAEPAKTNGSVQSGSQSGAARSAPNKNDNYLRYGYYFFLEKSVDAKLYSQTRSSSHYVPLLLRRVDLRKRRRKRNDLEYFPLTNVSYVVMRVLPGCAESIQEQKQAMFAADRKRLYTILQAEN 434
            K  P + N+VR  D+F ISFVGM+V+  D +   +K    NELLLYS+  A N+   +  + + ++   +    E       +   +R +  SS  K + +   +  P       D   IH+DP+      GT  +++V +PAS   Y       ++ K     D++   + + V+F V+++D+++D Q + + G+  VG  +   A ++PY  L++ AF   + +GK GL+ YS PD V S D  F LA  A ++   + G    + R+   K +NYLRYGYYFFL   V AKLY+ T +    +PL+++R +    RR+     YFPLT VSYVVM+V  GC     E+ +      + RL  +L   N
Sbjct:    8 KVRPDAKNVVRNTDEFVISFVGMSVASHDAVTGLSKHKSDNELLLYSVKCATNSSLPNATIAEEETTQDELELSEKNVDDEGKAELIREKDPSSTAKHLENAEQLKVPTTFGANNDSVFIHYDPVADAHNTGTLADTFVNVPASKRAYACSKEVLREHKNNQEADDRLCLKKIPVKFTVMEIDKISDMQARAVMGVDHVGSFMSDTAGSIPYIALLTKAFAVGSSIGKHGLKSYSRPDHVLSADVEFCLAN-APSDDDNEDGENDESVRT---KKENYLRYGYYFFLSHKVPAKLYTMTNAVDDSLPLMMKRAEEGLSRRRGQHCRYFPLTEVSYVVMKVSRGCCSLSHEEIRKRSEGHKVRLENMLSISN 374          
The following BLAST results are available for this feature:
BLAST of Gvermi6144.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3III8_9FLOR1.380e-15254.65Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID24_9FLOR6.100e-5934.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEE2_9FLOR5.740e-4932.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:2685494..2686825 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6144.t1Gvermi6144.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 2685494..2686825 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6144.t1 ID=Gvermi6144.t1|Name=Gvermi6144.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=444bp
MSSSFSGDSISILVHPNDLSGARHNGMRKENRFWRRTCCRIWRRVSVEAA
PALVRDTVFYAPDELHDAAFPARTPTQFIKTTPHSPNLVRQGDDFEISFV
GMNVSPQDIPAWNKNELLLYSLSNANAGSRSQWVRKMQSADGQAVNMENG
YLVSSRVRNEADSSEPKKVGSLNCINAPNMPLKQGDVPLIHFDPLRCGQI
HGTEPNSYVTIPASTALYKQFKAQDTVDEKADEQDVSVRFKVLDLDRVND
NQLQVISGLTQVGELVEKGAVAVPYAELISSAFQAAAMVGKRGLQKYSAP
DQVFSVDERFRLAEPAKTNGSVQSGSQSGAARSAPNKNDNYLRYGYYFFL
EKSVDAKLYSQTRSSSHYVPLLLRRVDLRKRRRKRNDLEYFPLTNVSYVV
MRVLPGCAESIQEQKQAMFAADRKRLYTILQAENISGALMRDK*
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