Gvermi5838.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5838.t1
Unique NameGvermi5838.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length480
Homology
BLAST of Gvermi5838.t1 vs. uniprot
Match: A0A2V3J660_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J660_9FLOR)

HSP 1 Score: 319 bits (817), Expect = 9.510e-101
Identity = 191/492 (38.82%), Postives = 282/492 (57.32%), Query Frame = 0
Query:    1 MDFVDYGWL-----DRNAELQPLNGDQNTIFLVTKSEFEQFRDISRRDMEAARERLSETFSESCLVAEL-PAAGESLPQEAREYTALVYESSLLDPNHRPVVK--ASRRRTVLLVPSENVTDYLSRCLTGLLEKPMRAAACVVASNNILDKLDVYDWYHDSSAIFHRLGIWAAYDDCSSHRTSDLLGFTSCVRMAYLMAITIGQKRLKLTEAGNVKNKYVNTAALKMVW-----LKREDKYADLPSNILLERATNVLHRCITKTYIEEDENVIQNIYTEFRKVLELVTRLAKIEYHPEGAKSVRNVIYRVLAWSYVVLTVVLALIVAVKNLASRDNVFERITDMVAVLTTLLVSVFGLMKLTSEDPNAIRNSLRGFKVLRYFEDVLRELRCNDVDELRRLLTVGAVDADWLDREGSCYADLSRSGNIRDSGCCSLGQLVSAGWFFSQQYALNIVSNKLVRFEVSGNRGHIEWIPGEGASWLQVFDANLTIKG 479
            MD +DY  +     +++A  +P    + + +L T++EFE++   +R D         ++F+  C V +  P   E   +  R YT   Y +++   +  P V+  AS ++ +L++  E+V +Y+S  +   L KP R AA            + Y+    S  +FHRLG W AYDDC  HR +D  G  S VR A   +    +  + +   G ++  ++ TAAL ++       K E   A +   ++L  A N +H C    ++  D   +  I  E  K+  L+  L  I+YH EGA     + +++ AW+Y+   ++ AL+ A  N+ASRDN+FER TDM AVLTTLLVSVFGL+KL SEDPN IRN+LRGFKVLR+FEDV+RE++C+D   LR +L+VGA D DWLDREGSCYA   RSG IRD+    LG+L  AGWFFS+  A+NIV  ++V F +S    H+E   G+ A+W +VFD+ L++KG
Sbjct:    1 MDVIDYFVIQGDPANQSAASRP---SETSAYLFTQAEFEKY---TRSD------NFYDSFNRRCPVVQFSPDMDEDHVKFPRGYT---YTAAVTHASWPPGVEVLASEQQKILMIKGEDVGEYISFLIKATLHKPRRVAAVCKPEK----PRETYEALQTSGVVFHRLGNWRAYDDCEEHRDTDRSGIISRVRSAEFASTISSKHTINVGGNGFLQKNFMCTAALTLILKEKNRTKGEKTGAGITRELVLN-ALNDMHGCKIDKFVATD---VGEIGREVSKMRSLIENLKSIKYHTEGAMVSTGLFWKISAWTYITGVILAALLTAALNIASRDNLFERFTDMAAVLTTLLVSVFGLLKLKSEDPNVIRNTLRGFKVLRHFEDVVREVKCDDEAYLRMVLSVGAADVDWLDREGSCYALTQRSGRIRDTVGAKLGELTRAGWFFSEHSAMNIVLKRVVHFRISSGIAHMEGSAGKTATWCEVFDSYLSVKG 469          
The following BLAST results are available for this feature:
BLAST of Gvermi5838.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J660_9FLOR9.510e-10138.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..296
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 297..319
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 320..330
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 331..349
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 350..479
NoneNo IPR availableTMHMMTMhelixcoord: 293..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:296997..298436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5838.t1Gvermi5838.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 296997..298436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5838.t1 ID=Gvermi5838.t1|Name=Gvermi5838.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=480bp
MDFVDYGWLDRNAELQPLNGDQNTIFLVTKSEFEQFRDISRRDMEAARER
LSETFSESCLVAELPAAGESLPQEAREYTALVYESSLLDPNHRPVVKASR
RRTVLLVPSENVTDYLSRCLTGLLEKPMRAAACVVASNNILDKLDVYDWY
HDSSAIFHRLGIWAAYDDCSSHRTSDLLGFTSCVRMAYLMAITIGQKRLK
LTEAGNVKNKYVNTAALKMVWLKREDKYADLPSNILLERATNVLHRCITK
TYIEEDENVIQNIYTEFRKVLELVTRLAKIEYHPEGAKSVRNVIYRVLAW
SYVVLTVVLALIVAVKNLASRDNVFERITDMVAVLTTLLVSVFGLMKLTS
EDPNAIRNSLRGFKVLRYFEDVLRELRCNDVDELRRLLTVGAVDADWLDR
EGSCYADLSRSGNIRDSGCCSLGQLVSAGWFFSQQYALNIVSNKLVRFEV
SGNRGHIEWIPGEGASWLQVFDANLTIKG*
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