Gvermi5881.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5881.t1
Unique NameGvermi5881.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length464
Homology
The following BLAST results are available for this feature:
BLAST of Gvermi5881.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..249
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 304..463
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 285..303
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 250..273
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 274..284
NoneNo IPR availableTMHMMTMhelixcoord: 250..272
NoneNo IPR availableTMHMMTMhelixcoord: 282..304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:519588..520979 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5881.t1Gvermi5881.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 519588..520979 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5881.t1 ID=Gvermi5881.t1|Name=Gvermi5881.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=464bp
MQPSTPTPHDGQPSPPSPSQSVAPHSQQSSNTPHSGRLLPRADGDNSSAS
QPTLTRNFKAAANAVIVGHRMERIYLEQEIGLDRDALRTFVTRLCVPQDY
YLVEIAVEVLLSLGKKIKEDGMEAMKRLARNILKPYCMEMHQGVRVFSLL
AFAMHFSKNRTALSSEEPSLDWSKMHEIHRGFASITDELLRDMFSDCVFP
HFRFHAFCEDDFRYGTVLKKLEKEPRPFDWKSKEYDLESRRGRYYGRTPI
PYVILTYTVLLGTIAAAAGLIVWWNKPRAEGIFEALQVIPLIDLFYFGIW
KVFSYNDKIVRDLLTTRWTIDSVEDFRRYFNMSESEMSERLLGKDSELGK
LLQPRFASYSSVPLLGFLSFSKPCPSAVFTGRILYFVVNDAEYVVDLVNE
RVGFFRTITSGVGGISWIFQKGFKNAVPTLPLRRRQTQMYSVSTTATNLV
LEKDLDEVCDFLG*
back to top