Gvermi5920.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5920.t1
Unique NameGvermi5920.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length214
Homology
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BLAST of Gvermi5920.t1 vs. uniprot
Match: R7QH41_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH41_CHOCR)

HSP 1 Score: 64.3 bits (155), Expect = 1.090e-8
Identity = 55/107 (51.40%), Postives = 62/107 (57.94%), Query Frame = 0 
Query:   59 ATPRPKRGRRKKRPDLTDEERKALRALQNRAATRRSRERSRLRAAELKNQLQRSLHHNQVLQRERDTLLYCMKQVRVKSSMARAPPK----RPNPMSLSVILNKYDE 161
            ATPRPKRGRRKKRPDLT+ +RKALRA QNR A          RA  LK QL  SL  N +L  ER  LL     V+  +  A+   K    R NPMSL  ILN +DE
Sbjct:  154 ATPRPKRGRRKKRPDLTESQRKALRAQQNRQAXXXXXXXXXXRAEMLKAQLIHSLRLNSLLVAERRKLLNA--DVKGNTMEAKGGNKEEGERKNPMSLETILN-HDE 257
The following BLAST results are available for this feature:
BLAST of Gvermi5920.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QH41_CHOCR1.090e-851.40Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..97
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 77..126
score: 8.519097

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:808944..809585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5920.t1Gvermi5920.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 808944..809585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5920.t1 ID=Gvermi5920.t1|Name=Gvermi5920.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=214bp
MIPTSDTHRPVFTAAAQGSSPPGSSALPSQVSMLSSSPVSQHALPSSVCA
PSTPGSAIATPRPKRGRRKKRPDLTDEERKALRALQNRAATRRSRERSRL
RAAELKNQLQRSLHHNQVLQRERDTLLYCMKQVRVKSSMARAPPKRPNPM
SLSVILNKYDEPVPNRHACIAIPPSMMSLAVAATNASPLSVTSAAHVPSV
NMAFRKNLHSRTP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP