Gvermi6032.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6032.t1
Unique NameGvermi6032.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length217
Homology
BLAST of Gvermi6032.t1 vs. uniprot
Match: A0A2V3J0C8_9FLOR (Transcription initiation factor TFIID subunit 14 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0C8_9FLOR)

HSP 1 Score: 383 bits (983), Expect = 1.020e-133
Identity = 184/216 (85.19%), Postives = 196/216 (90.74%), Query Frame = 0
Query:    1 MKRVKGVNLHIPIVHGSYAKHLGDKGTESRSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTDMPYEVQAYGWGEFEIIIRVFFQDASEKPVEFFHPLRLFENLGEPSPDPVISEHYDEFVFQDPPEALHELLKTIPHGPNLRIKQPSHPIPAYFKDFSGAESADLRKLEHARRKLREETTKRQSRYEELEEERADLVRQITTLGGRIS 216
            MKRVKGVNLHIP+VHGSYAKHLGDKGTESRSHEWTVYLRPLQ ADLSHFI+HVEFVLHESFEPQ RRVT+MPYEVQ YGWGEFE++IRVFFQD SEKPVEFFHPLRLFE +GEPSPDPV+SEHYDE VFQDPPE LH LLKTIPHGPNLRIKQPS+PI  YFKDFSGAES DLRKLEHARR LREET KRQ++YE LEEERA L+RQI+    R S
Sbjct:    1 MKRVKGVNLHIPVVHGSYAKHLGDKGTESRSHEWTVYLRPLQAADLSHFIKHVEFVLHESFEPQTRRVTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVEFFHPLRLFETMGEPSPDPVVSEHYDEIVFQDPPEKLHSLLKTIPHGPNLRIKQPSYPISNYFKDFSGAESNDLRKLEHARRTLREETIKRQAKYERLEEERAGLLRQISGYDSRAS 216          
BLAST of Gvermi6032.t1 vs. uniprot
Match: R7QL70_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL70_CHOCR)

HSP 1 Score: 295 bits (755), Expect = 3.510e-97
Identity = 143/215 (66.51%), Postives = 175/215 (81.40%), Query Frame = 0
Query:    1 MKRVKGVNLHIPIVHGSYAKHLGDKGTESRSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTDMPYEVQAYGWGEFEIIIRVFFQDASEKPVEFFHPLRLF-ENLGEPSPDPVISEHYDEFVFQDPPEALHELLKTIPHGPNLRIKQPSHPIPAYFKDFSGAESADLRKLEHARRKLREETTKRQSRYEELEEERADLVRQITTLGGR 214
            MKRV+G   H+P+VHGSYAK+L D+GTE+RSH WTVYLRP+  AD+SHFI HV+FVLHESF PQVRRVT+MPYEV  YGWGEFEIIIRVFF D +EKPV+ +HPLRLF E   EP+ DPVISE YDE VFQDP E L ++L+T PHGP ++IKQ  +   AYFKDFS AES DL+K+E AR++LREET +++ RYE+L+ ER+ LVR+I + GGR
Sbjct:  127 MKRVRGTVFHVPVVHGSYAKYLQDRGTEARSHHWTVYLRPVNNADISHFIHHVDFVLHESFNPQVRRVTEMPYEVSEYGWGEFEIIIRVFFNDTAEKPVDLYHPLRLFVERTEEPTLDPVISEFYDEIVFQDPSEKLLDMLQTTPHGPQIQIKQSMYS--AYFKDFSNAESVDLKKIEEARKRLREETIRKRERYEKLDIERSALVREINSRGGR 339          
BLAST of Gvermi6032.t1 vs. uniprot
Match: A0A6T6BSY7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BSY7_9RHOD)

HSP 1 Score: 177 bits (448), Expect = 8.500e-52
Identity = 104/220 (47.27%), Postives = 135/220 (61.36%), Query Frame = 0
Query:    3 RVKGVNLHIPIVHGSYAKHLGDKGTESRSHEWTVYLRPLQPA--DLSHFIRHVEFVLHESFEPQVRRVTDMPYEVQAYGWGEFEIIIRVFFQDASEKPVEFFHPLRLFENLG---EPSPDPVISEHYDEFVFQDPPEALHELLKTIPHGP-NLRIKQPSHP--IPAYFKDFSGAESADLRKLEHARRKLREETTKRQSRYEELEEERADLVRQITTLGGR 214
            R++G  L IP+V GS A   G K    R+H+WTVYLR  +PA  DL + ++ VEF+LH SF P  R V   PYEV  +GWGEFE+ IRV   +  EKPVE FHPLRLF  L    + +  PV+SE YDE V QDPPE L +L+K    G  + ++  PS    +  ++ D SG E  DL  +  ARRK++EE   R  RY+EL++ER  L  +IT LGGR
Sbjct:   44 RLRGELLVIPVVTGSVAIWQGKKAPADRTHKWTVYLRG-EPATVDLRYAVQRVEFLLHSSFSPPTRVVEQPPYEVTEFGWGEFEVTIRVHLLNGLEKPVELFHPLRLFHGLPNHQDLNRTPVVSEFYDEIVIQDPPEQLFKLVKGTGGGAVHAKVLPPSKVSNLAVHYTDMSGKEREDLEAITAARRKIQEEVDGRHLRYQELDKEREGLAMEITKLGGR 262          
BLAST of Gvermi6032.t1 vs. uniprot
Match: A0A5J4YYX1_PORPP (Transcription initiation factor TFIID subunit 14b n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYX1_PORPP)

HSP 1 Score: 164 bits (415), Expect = 1.410e-47
Identity = 89/209 (42.58%), Postives = 130/209 (62.20%), Query Frame = 0
Query:    1 MKRVKGVNLHIPIVHGSYAKHLGDKGTESRSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTDMPYEVQAYGWGEFEIIIRVFFQDASEKPVEFFHPLRLFENLGEP-SPDPVISEHYDEFVFQDPPEALHELLKTIPHGPNLRIKQPSHPIPAYFKDFSGAESADLRKLEHARRKLREETTKRQSRYEELEEERADLVRQI 208
            MKRVKG     PIV+GS +   G    + ++H W +++R L   DLS+F+ HVEFVLHE+ +P VR V + PYE++ YGWGEFE+IIR+ F+D  EKP + +H L+LF   GE  +  PV+S+HYDE VF +PPE L  +L+    G + ++   +  +  +  DF   E  D  K++ ARR ++  + K Q R EEL++E A L  Q+
Sbjct:    1 MKRVKGAVFVQPIVYGSVSTWQGPDADQFKAHHWYIFVRGLYHEDLSYFVDHVEFVLHETLQPPVRIVREPPYEIEDYGWGEFEVIIRIHFKDKLEKPADMYHMLKLFSLTGEKLTTTPVVSDHYDELVFIEPPEKLLSILEK---GTDKKV---TSALGKFTSDFIAQEQEDTSKVQAARRLVQAHSHKLQGRLEELDKEAALLRYQV 203          
BLAST of Gvermi6032.t1 vs. uniprot
Match: E9G0X1_DAPPU (Uncharacterized protein n=5 Tax=Daphnia TaxID=6668 RepID=E9G0X1_DAPPU)

HSP 1 Score: 147 bits (371), Expect = 1.100e-40
Identity = 78/194 (40.21%), Postives = 119/194 (61.34%), Query Frame = 0
Query:    3 RVKGVNLHIPIVHGSYAKHLGDKGTES-RSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTDMPYEVQAYGWGEFEIIIRVFFQDASEKPVEFFHPLRLFENLGE--PSPDPVISEHYDEFVFQDPPEALHELLKTIPHGPNLRIKQPSHPIPAYFKDFSGAESADLRKLEHARRKLREETTKRQSR 193
            R KGV L  P+V+G+ AK+ G K  E   +H+WTVY+RP +  D+S +++ + F LH+S+  Q R +T  PYEV   GWGEFEI+I+++FQD +E+PV F+H L+LF+N  E      PV+SE Y+E VFQ+P   +H+LL  IPH     +K  +        DF   + + L  +  A+ K++ E ++ + R
Sbjct:   13 RTKGVILK-PVVYGNVAKYFGKKREEDGHTHQWTVYVRPFENEDMSTYVKKINFKLHDSYANQNRVLTKPPYEVTETGWGEFEIVIKIYFQDPNERPVTFYHILKLFQNSPEIVVGKKPVVSEFYEEIVFQEPTVMMHQLLTNIPHLSTSPVKHDA--------DFEEKKVSTLDSIVKAKAKVKNELSELKDR 197          
BLAST of Gvermi6032.t1 vs. uniprot
Match: UPI001E1D669E (YEATS domain-containing protein 4-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D669E)

HSP 1 Score: 143 bits (361), Expect = 1.620e-39
Identity = 71/123 (57.72%), Postives = 90/123 (73.17%), Query Frame = 0
Query:   68 VTDMPYEVQAYGWGEFEIIIRVFFQDASEKPVEFFHPLRLFENLG-EPSPDPVISEHYDEFVFQDPPEALHELLKTIPHGPNLRIKQPSHPIPAYFKDFSGAESADLRKLEHARRKLREETTK 189
            VT+MPYE+  YGWGEF+ IIR++F D +EK VEFFHPL+LF   G EPS  PV+ E YDE VFQDP E L  LLK+ PHGP  R+K  +  +  Y++DFS +ES DL+K+E AR+K+R ET K
Sbjct:   66 VTEMPYEISEYGWGEFDAIIRLYFHDPAEKVVEFFHPLKLFPGGGQEPSRKPVVHEFYDEIVFQDPSERLLGLLKSTPHGPGTRLK--TSLLAPYYRDFSSSESDDLKKIEEARKKVRVETLK 186          
BLAST of Gvermi6032.t1 vs. uniprot
Match: A0A1Y3NBE3_PIRSE (Uncharacterized protein n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y3NBE3_PIRSE)

HSP 1 Score: 143 bits (361), Expect = 2.630e-39
Identity = 81/200 (40.50%), Postives = 126/200 (63.00%), Query Frame = 0
Query:    2 KRVKGVNLHIPIVHGSYAKHLGDKGTESRSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTDMPYEVQAYGWGEFEIIIRVFFQDASEKPVEFFHPLRLF--ENLGEPSPDPVISEHYDEFVFQDPPEALHELLKTIPHGPNLRIKQPSHPIPAYFKDFSGAESADLRKLEHARRKLREETTKRQSRYEELEE 199
            KR+K V +  PIV+GSYA  L  K     +H WTV++R L   D+S +I+ V F LHESFE   R V   P+EV   GWGEFEI+I+++FQD+SEK + FFH L+L+  ++       PV+S+HYDE VF +P +++H+ L TIP  P +   +P + I  Y ++    E A+L++++  ++K+ +E  + + + E LE+
Sbjct:   12 KRLKNVTIVKPIVYGSYAVPLQKKLENGHTHRWTVFVRGLNGEDISTYIKKVVFRLHESFENPNRVVDSFPFEVSETGWGEFEILIKLYFQDSSEKHISFFHQLQLYPKDDTSLQGKKPVLSDHYDELVFHEPVQSMHKCL-TIP--PTIPDDKPEYLINNYTEE---REKAELQQIKKYQQKVLQEIEEYKKKNELLEQ 205          
BLAST of Gvermi6032.t1 vs. uniprot
Match: A0A8B7YD49_ACAPL (YEATS domain-containing protein 4-like n=3 Tax=Asteroidea TaxID=7588 RepID=A0A8B7YD49_ACAPL)

HSP 1 Score: 143 bits (361), Expect = 6.150e-39
Identity = 78/192 (40.62%), Postives = 119/192 (61.98%), Query Frame = 0
Query:    3 RVKGVNLHIPIVHGSYAKHLGDKGTES-RSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTDMPYEVQAYGWGEFEIIIRVFFQDASEKPVEFFHPLRLFEN-----LGEPSPDPVISEHYDEFVFQDPPEALHELLKTIPHGPNLRIKQPSHPIPAYFKDFSGAESADLRKLEHARRKLREETT 188
            RVKG+NL  PIV+G+ +++ G K  E   +H+WT+Y++P +  D+S +++ ++F LHES+   +R VT  PYEVQ  GWGEFEIII++FF D +E+PV  +H L+LF+      LG+ +   ++SEHYDE +FQDP   + +LL +      L +    H       DF+  E   +  L+ AR+K+R E T
Sbjct:   26 RVKGINLVKPIVYGNISRYFGKKREEDGHTHQWTIYVKPHRNEDMSTYVKKIQFKLHESYANPLRVVTKPPYEVQETGWGEFEIIIKIFFVDPNERPVTLYHFLKLFQTDTNLFLGKKT---LVSEHYDEMIFQDPTAMMQQLLCS---SRVLTLGAHKHET-----DFNELEEKTVTALQSARKKIRFEIT 206          
BLAST of Gvermi6032.t1 vs. uniprot
Match: F6PHR7_CIOIN (Uncharacterized protein n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6PHR7_CIOIN)

HSP 1 Score: 142 bits (359), Expect = 7.530e-39
Identity = 77/188 (40.96%), Postives = 116/188 (61.70%), Query Frame = 0
Query:    3 RVKGVNLHIPIVHGSYAKHLGDKGTES-RSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTDMPYEVQAYGWGEFEIIIRVFFQDASEKPVEFFHPLRLFE---NLGEPSPDPVISEHYDEFVFQDPPEALHELLKTIPHGPNLRIKQPSHPIPAYFKDFSGAESADLRKLEHARRKLREE 186
            RVKGV +  PIV+G+ A++ G K  E   +H WTVYL+P    D+S +++ ++F LHES+   +R VT  PYEV   GWGEFEI+I++FF D +++P+  +H LRLF+   N+   +   VISE YDE VFQDP   +H LL +     N ++   +H    +  DF   E+  L +L+ A++K++ E
Sbjct:   16 RVKGVCIIKPIVYGNSARYFGKKREEDGHTHTWTVYLKPYHNEDMSVYVKKIQFKLHESYANPIRVVTKPPYEVTETGWGEFEIVIKIFFHDPNDRPLTIYHGLRLFQTENNIIVGNKKAVISEFYDEMVFQDPSTMMHSLLTS-----NRQLTLGAHK---HETDFEEKEATTLAQLQSAKQKIQNE 195          
BLAST of Gvermi6032.t1 vs. uniprot
Match: A0A7J7IK28_9RHOD (Myeloid lymphoid or mixed-lineage leukemia (Trithorax, ) n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IK28_9RHOD)

HSP 1 Score: 142 bits (358), Expect = 7.620e-39
Identity = 87/187 (46.52%), Postives = 112/187 (59.89%), Query Frame = 0
Query:    1 MKRVKGVNLHIPIVHGSYAKHLGDKGTESRSHEWTVYLR----PLQPADLSHFIRHVEFVLHESFEPQVRRVTDMPYEVQAYGWGEFEIIIRVFFQDASEKPVEFFHPLRLFENLG-EPSPDPVISEHYDEFVFQDPPEALHELLKTIPHGPNLRIKQPSHP--IPAYFKDFSGAESADLRKLEHAR 180
            M RV+G+ +   +VHGS A   G +  E+++H WTVY+R    PL+  DLS +IR VEFVLHESF   VR VT  P+ +  YGWGEFEIIIR+F  D ++KPVE +HPLRLF   G E S  PV+SEH D  VF +P     EL +T+      R+   S    +P +  D    E  DLRK+  AR
Sbjct:    1 MVRVRGLQIERRLVHGSVAFWQGPRAPETKTHRWTVYVRGASDPLE--DLSVYIRKVEFVLHESFSDPVRVVTQAPFCLTEYGWGEFEIIIRLFPLDDAKKPVELYHPLRLFPPPGQELSEKPVVSEHADVLVFVEPST---ELERTLREADTKRLAPESWGSLLPLFGGDLKEVEIDDLRKVRQAR 182          
The following BLAST results are available for this feature:
BLAST of Gvermi6032.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0C8_9FLOR1.020e-13385.19Transcription initiation factor TFIID subunit 14 n... [more]
R7QL70_CHOCR3.510e-9766.51Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6T6BSY7_9RHOD8.500e-5247.27Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YYX1_PORPP1.410e-4742.58Transcription initiation factor TFIID subunit 14b ... [more]
E9G0X1_DAPPU1.100e-4040.21Uncharacterized protein n=5 Tax=Daphnia TaxID=6668... [more]
UPI001E1D669E1.620e-3957.72YEATS domain-containing protein 4-like n=1 Tax=Mer... [more]
A0A1Y3NBE3_PIRSE2.630e-3940.50Uncharacterized protein n=3 Tax=Neocallimastigacea... [more]
A0A8B7YD49_ACAPL6.150e-3940.63YEATS domain-containing protein 4-like n=3 Tax=Ast... [more]
F6PHR7_CIOIN7.530e-3940.96Uncharacterized protein n=2 Tax=Ciona intestinalis... [more]
A0A7J7IK28_9RHOD7.620e-3946.52Myeloid lymphoid or mixed-lineage leukemia (Tritho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 180..214
NoneNo IPR availablePANTHERPTHR47573PROTEIN AF-9 HOMOLOGcoord: 3..209
NoneNo IPR availableCDDcd16910YEATS_TFIID14_likecoord: 9..136
e-value: 1.30298E-61
score: 186.632
IPR005033YEATSPFAMPF03366YEATScoord: 31..107
e-value: 4.7E-27
score: 93.8
IPR005033YEATSPROSITEPS51037YEATScoord: 3..143
score: 48.415176
IPR038704YEATS superfamilyGENE3D2.60.40.1970YEATS domaincoord: 4..154
e-value: 1.5E-42
score: 147.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:1830631..1831281 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6032.t1Gvermi6032.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 1830631..1831281 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6032.t1 ID=Gvermi6032.t1|Name=Gvermi6032.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=217bp
MKRVKGVNLHIPIVHGSYAKHLGDKGTESRSHEWTVYLRPLQPADLSHFI
RHVEFVLHESFEPQVRRVTDMPYEVQAYGWGEFEIIIRVFFQDASEKPVE
FFHPLRLFENLGEPSPDPVISEHYDEFVFQDPPEALHELLKTIPHGPNLR
IKQPSHPIPAYFKDFSGAESADLRKLEHARRKLREETTKRQSRYEELEEE
RADLVRQITTLGGRIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005033YEATS
IPR038704YEAST_sf