Gvermi6027.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6027.t1
Unique NameGvermi6027.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length295
Homology
BLAST of Gvermi6027.t1 vs. uniprot
Match: A0A2V3IH72_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH72_9FLOR)

HSP 1 Score: 362 bits (929), Expect = 9.430e-123
Identity = 186/305 (60.98%), Postives = 234/305 (76.72%), Query Frame = 0
Query:    1 MVQFRIECTLPFSAEHFWRIRDAPSFLAFVVQDGLLKEMRATEPIQEIDGWCSRVQHYTPKDVDCPDMIRTFIGDTMFAVSDEQRWNPHERPFHLNFFIRPSFLSNLSRTSGELSLEQCGADDQHNQPLTPE--EQQLETSSAG--------------SISDPESGEENDDQPTEQSTGQYIDALPAEEKSVHVVSGETKVSILTLGWFVERAIVHNLRRFYDKYPGTVTRFRKKLYNDFADGDTSVPISTVIERFLESDGKLKKKVPDLEDVRESDGSSFSDSSDSLVCDEDAESFCQVAILPE 289
            MV+F+IECTLPF A  FWRIRDAPSFL+F+VQDGLLKEMRATEP++E DGW SRVQ YTP DVDCPDMIR F+GDTMFAVSDEQRWN  ERP HL+FFIRPSFLS LSRT GELS+EQ   +   ++ +  E  + Q E  +                S +D +  +E+D + +EQ+  ++++ALPAEEKS+HVV+GET+VSILTLGWF+ERAIVHNLR+FY+KYP +V RFRKKLY+DFA GDT+VP+S VI+RFLES+ KLK+K+  +E+  ESD  + SDSSDS+   +D +++ Q  ILPE
Sbjct:    1 MVRFQIECTLPFPAADFWRIRDAPSFLSFIVQDGLLKEMRATEPVEEPDGWYSRVQQYTPADVDCPDMIRAFVGDTMFAVSDEQRWNSDERPCHLHFFIRPSFLSGLSRTYGELSIEQMYTEPPSDEDIREETLDDQSEQDAXXXXXXXXXXXXXXXDSSTDVDCSDESDVELSEQTPDEFLEALPAEEKSLHVVTGETRVSILTLGWFIERAIVHNLRKFYEKYPPSVIRFRKKLYDDFAQGDTNVPVSVVIDRFLESEKKLKEKLSAVEESAESDELALSDSSDSVEL-KDIDTYGQAVILPE 304          
BLAST of Gvermi6027.t1 vs. uniprot
Match: A0A5J4Z2A6_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2A6_PORPP)

HSP 1 Score: 129 bits (324), Expect = 4.960e-31
Identity = 78/240 (32.50%), Postives = 125/240 (52.08%), Query Frame = 0
Query:    2 VQFRIECTLPFSAEHFWRIRDAPSFLAFVVQDGLLKEMRATEP-IQEIDGWCSRVQHYTPKDVDCPDMIRTFIGDTMFAVSDEQRWNPHERPFHLNFFIRPSFLSNLSRTSGELSL-----------------EQCGADDQHNQPLTPE---EQQLETSSAGSISDPESGEENDDQPTEQSTGQYIDALPAEEK---SVHVVSGETKVSILTLGWFVERAIVHNLRRFYDKYPGTVTRFR 217
            ++FR+EC L ++ E +W+I     FL F+V+DG LK + ATEP   + +    R++ Y P+ V+ PDM+   IGD+M  V D QRWN   +PFH++F IRP+FL     T G LSL                  + GA+++   PL PE   E +L+  +A            +D P +++ G       A      ++H VSG  +V++  +G+++E+A+  N+ +FY  YP     F+
Sbjct:    3 LEFRVECVLNWAREDYWKIMSFGGFLDFLVKDGCLKRISATEPEFHDDEQVFRRIRTYVPRHVEAPDMVMRVIGDSMLEVHDHQRWNQATKPFHVDFEIRPTFLREFIETKGYLSLGAYEIPTAEPDAAVVDVAEPGANEEAG-PLAPEGTEEDRLQPDTA-----------QEDVPEKEAGGAQTTTSSAGSSPPATMHTVSGVCQVNMFYVGYYLEQAVKQNMVKFYHMYPQHCANFK 230          
The following BLAST results are available for this feature:
BLAST of Gvermi6027.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IH72_9FLOR9.430e-12360.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4Z2A6_PORPP4.960e-3132.50Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:1818871..1819755 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6027.t1Gvermi6027.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 1818871..1819755 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6027.t1 ID=Gvermi6027.t1|Name=Gvermi6027.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=295bp
MVQFRIECTLPFSAEHFWRIRDAPSFLAFVVQDGLLKEMRATEPIQEIDG
WCSRVQHYTPKDVDCPDMIRTFIGDTMFAVSDEQRWNPHERPFHLNFFIR
PSFLSNLSRTSGELSLEQCGADDQHNQPLTPEEQQLETSSAGSISDPESG
EENDDQPTEQSTGQYIDALPAEEKSVHVVSGETKVSILTLGWFVERAIVH
NLRRFYDKYPGTVTRFRKKLYNDFADGDTSVPISTVIERFLESDGKLKKK
VPDLEDVRESDGSSFSDSSDSLVCDEDAESFCQVAILPEYDHPN*
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