Gvermi5895.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5895.t1
Unique NameGvermi5895.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length213
Homology
The following BLAST results are available for this feature:
BLAST of Gvermi5895.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 181..212
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 114..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 145..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..180
NoneNo IPR availableTMHMMTMhelixcoord: 158..180
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 121..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:565225..565863 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5895.t1Gvermi5895.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 565225..565863 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5895.t1 ID=Gvermi5895.t1|Name=Gvermi5895.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=213bp
MFLNLSCIRRVYGDGLALPVTTSSRRSKRRVLALSTGFLAFIAATSVGYI
IHANHVSTRLAETVSGIVGGLRRAMTAIDWKASAAFKITDAMRVSIAMSM
ALGVLLGVGVGLISGLEPAVVIGVSASMAMGCVFVMSFAILHGVNALRAV
AFALFVSVCLPFGFGFGFGSGILVGVFLGLEDADEIREKTADFVTNFRDF
VKVVTAFTLEIL*
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