Gvermi7241.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7241.t1
Unique NameGvermi7241.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length138
Homology
BLAST of Gvermi7241.t1 vs. uniprot
Match: A0A2A5GBS4_9GAMM (Znf/thioredoxin_put domain-containing protein n=2 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A2A5GBS4_9GAMM)

HSP 1 Score: 107 bits (267), Expect = 2.520e-25
Identity = 55/80 (68.75%), Postives = 62/80 (77.50%), Query Frame = 0
Query:    1 MTDIITRCPSCSVSFRASPAQLQAANGQVRCGACLTIFDAYSNEVVEQNPLEETQKPLPEKDDLMIFDEMDI--NSAEEQ 78
            MT+IITRCP CSVSFRASPAQLQAANG+VRCGACL +FDA +NE+  Q P      P+  KDDLMIFDEMD+  N  EEQ
Sbjct:    1 MTEIITRCPDCSVSFRASPAQLQAANGRVRCGACLGVFDALTNEITPQKP-----DPIDPKDDLMIFDEMDVSPNQNEEQ 75          
BLAST of Gvermi7241.t1 vs. uniprot
Match: A0A7C1T7A1_9GAMM (DUF3426 domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7C1T7A1_9GAMM)

HSP 1 Score: 91.3 bits (225), Expect = 3.580e-19
Identity = 44/80 (55.00%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    1 MTDIITRCPSCSVSFRASPAQLQAANGQVRCGACLTIFDAYSNEVVEQNPLE---ETQKPLPEKDDLMIFDEMDINSAEE 77
            MT+IITRCP CS SFRASPA L+AANGQ +CG+CL IFDAY++++ E+ P +   E    L + DDL+I+D+MDI+  ++
Sbjct:    1 MTEIITRCPDCSASFRASPAHLEAANGQAKCGSCLLIFDAYAHQIEEEQPRDNPSENNLSL-DGDDLLIYDDMDISVLDD 79          
BLAST of Gvermi7241.t1 vs. uniprot
Match: A0A2E2W3T6_9GAMM (Znf/thioredoxin_put domain-containing protein (Fragment) n=1 Tax=Porticoccus sp. TaxID=2024853 RepID=A0A2E2W3T6_9GAMM)

HSP 1 Score: 73.6 bits (179), Expect = 1.710e-14
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 MTDIITRCPSCSVSFRASPAQLQAANGQVRCGACLTIFDAYSNEV 45
            M +IITRCPSCS+SFRA PA LQAANG VRCGACL +FDA  N V
Sbjct:    1 MNEIITRCPSCSLSFRAMPAHLQAANGLVRCGACLKVFDARENLV 45          
BLAST of Gvermi7241.t1 vs. uniprot
Match: A0A2G1Y3V2_9GAMM (Uncharacterized protein n=1 Tax=Porticoccus sp. TaxID=2024853 RepID=A0A2G1Y3V2_9GAMM)

HSP 1 Score: 73.6 bits (179), Expect = 7.760e-13
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 MTDIITRCPSCSVSFRASPAQLQAANGQVRCGACLTIFDAYSNEV 45
            M +IITRCPSCS+SFRA PA LQAANG VRCGACL +FDA  N V
Sbjct:    1 MNEIITRCPSCSLSFRAMPAHLQAANGLVRCGACLKVFDARENLV 45          
BLAST of Gvermi7241.t1 vs. uniprot
Match: UPI0006738DAD (zinc-ribbon domain-containing protein n=1 Tax=Gilvimarinus polysaccharolyticus TaxID=863921 RepID=UPI0006738DAD)

HSP 1 Score: 68.2 bits (165), Expect = 1.110e-10
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 MTDIITRCPSCSVSFRASPAQLQAANGQVRCGACLTIFDAYSNEVVEQNP 50
            MT ++TRCP CS SFR +PAQ+Q A G VRCG+CL IF+A  N +  +NP
Sbjct:    1 MTQLVTRCPQCSTSFRITPAQIQKARGAVRCGSCLHIFNAEQNLIEGRNP 50          
BLAST of Gvermi7241.t1 vs. uniprot
Match: UPI0005A15A84 (zinc-ribbon domain-containing protein n=1 Tax=Gilvimarinus agarilyticus TaxID=679259 RepID=UPI0005A15A84)

HSP 1 Score: 66.6 bits (161), Expect = 3.830e-10
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    1 MTDIITRCPSCSVSFRASPAQLQAANGQVRCGACLTIFDAYSNEVV--EQNPLEETQKP 57
            MT ++TRCP CS SFR +PAQ+Q A G VRCG+CL IF+A  N +      P+E   KP
Sbjct:    1 MTQLVTRCPQCSTSFRITPAQIQKARGAVRCGSCLHIFNAEHNLIDGGTPKPIESRSKP 59          
BLAST of Gvermi7241.t1 vs. uniprot
Match: A0A1D2X654_9GAMM (Znf/thioredoxin_put domain-containing protein n=1 Tax=Endozoicomonas sp. (ex Bugula neritina AB1) TaxID=1868284 RepID=A0A1D2X654_9GAMM)

HSP 1 Score: 65.5 bits (158), Expect = 6.790e-10
Identity = 33/84 (39.29%), Postives = 49/84 (58.33%), Query Frame = 0
Query:    5 ITRCPSCSVSFRASPAQLQAANGQVRCGACLTIFDAYSN-----------EVVEQNPLEETQKPLPEKDDLMIFDEMDINSAEE 77
            +T+CP CS SFR + AQ++AANG VRCG+CL +FDA  +            + EQ+P+ E  +P   K+    FDE  +  +E+
Sbjct:   11 VTQCPHCSTSFRVTQAQIEAANGAVRCGSCLQVFDARKHMENKEAASSEATIAEQSPVSENIQPKDPKNTPPSFDETTVIESEK 94          
BLAST of Gvermi7241.t1 vs. uniprot
Match: UPI001F2D97E7 (DUF3426 domain-containing protein n=1 Tax=Marinagarivorans sp. GE09 TaxID=2721545 RepID=UPI001F2D97E7)

HSP 1 Score: 65.1 bits (157), Expect = 1.270e-9
Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    1 MTDIITRCPSCSVSFRASPAQLQAANGQVRCGACLTIFDAYSNEVVEQNPLEETQKPL-PEKDDLMIFDEMDINSAEE 77
            MT +ITRCP CS +F  + A L  ANG VRCG+CL +F+   N     N L+++ + L  + DDL+I D+++++   +
Sbjct:    1 MTSLITRCPKCSTAFNVTDAHLNTANGAVRCGSCLNVFNGRENLT---NSLQKSSRALLDDDDDLLISDDLELDELRD 75          
BLAST of Gvermi7241.t1 vs. uniprot
Match: A0A367LUM4_PSEAI (DUF3426 domain-containing protein (Fragment) n=7 Tax=Pseudomonas aeruginosa TaxID=287 RepID=A0A367LUM4_PSEAI)

HSP 1 Score: 59.3 bits (142), Expect = 3.400e-9
Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    3 DIITRCPSCSVSFRASPAQLQAANGQVRCGACLTIFDAYSNEV 45
             +IT+CP CS SFR + AQL AANG VRCG CL +F+A  ++V
Sbjct:    4 SVITQCPHCSTSFRVNDAQLGAANGAVRCGTCLKVFNALQHQV 46          
BLAST of Gvermi7241.t1 vs. uniprot
Match: UPI001CA4A0DC (zinc-ribbon domain-containing protein n=2 Tax=Pseudomonas aeruginosa TaxID=287 RepID=UPI001CA4A0DC)

HSP 1 Score: 59.3 bits (142), Expect = 3.400e-9
Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    3 DIITRCPSCSVSFRASPAQLQAANGQVRCGACLTIFDAYSNEV 45
             +IT+CP CS SFR + AQL AANG VRCG CL +F+A  ++V
Sbjct:    4 SVITQCPHCSTSFRVNDAQLGAANGAVRCGTCLKVFNALQHQV 46          
The following BLAST results are available for this feature:
BLAST of Gvermi7241.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2A5GBS4_9GAMM2.520e-2568.75Znf/thioredoxin_put domain-containing protein n=2 ... [more]
A0A7C1T7A1_9GAMM3.580e-1955.00DUF3426 domain-containing protein n=2 Tax=root Tax... [more]
A0A2E2W3T6_9GAMM1.710e-1475.56Znf/thioredoxin_put domain-containing protein (Fra... [more]
A0A2G1Y3V2_9GAMM7.760e-1375.56Uncharacterized protein n=1 Tax=Porticoccus sp. Ta... [more]
UPI0006738DAD1.110e-1058.00zinc-ribbon domain-containing protein n=1 Tax=Gilv... [more]
UPI0005A15A843.830e-1052.54zinc-ribbon domain-containing protein n=1 Tax=Gilv... [more]
A0A1D2X654_9GAMM6.790e-1039.29Znf/thioredoxin_put domain-containing protein n=1 ... [more]
UPI001F2D97E71.270e-939.74DUF3426 domain-containing protein n=1 Tax=Marinaga... [more]
A0A367LUM4_PSEAI3.400e-958.14DUF3426 domain-containing protein (Fragment) n=7 T... [more]
UPI001CA4A0DC3.400e-958.14zinc-ribbon domain-containing protein n=2 Tax=Pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..138
IPR011723Zinc finger/thioredoxin putativeTIGRFAMTIGR02098TIGR02098coord: 5..41
e-value: 5.6E-11
score: 39.9
IPR011723Zinc finger/thioredoxin putativePFAMPF13719zinc_ribbon_5coord: 4..40
e-value: 1.6E-8
score: 34.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_970contigScGOVlb_970:1..414 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7241.t1Gvermi7241.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_970 1..414 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7241.t1 ID=Gvermi7241.t1|Name=Gvermi7241.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=138bp
MTDIITRCPSCSVSFRASPAQLQAANGQVRCGACLTIFDAYSNEVVEQNP
LEETQKPLPEKDDLMIFDEMDINSAEEQEQEQEQEQEQEQEQEQEQEQEQ
EQEQEQDNDDSTPIQSATAFTDPTTSDQEAESTFQDMV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011723Znf/thioredoxin_put