Gvermi13446.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13446.t1
Unique NameGvermi13446.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length93
Homology
[Close]
BLAST of Gvermi13446.t1 vs. uniprot
Match: A0A2V3J2S2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2S2_9FLOR)

HSP 1 Score: 107 bits (268), Expect = 5.430e-27
Identity = 58/93 (62.37%), Postives = 66/93 (70.97%), Query Frame = 0 
Query:    1 MPHGVGPAVAFVARNDALVSDIKTLHVNPRKRQRVDISDAFIRACRYDERPFVFAPDLAHTLQPHDAANNALPP-SALQGVPHNEPQSRKDAK 92
            MP    P VA+VAR+DALVSDIK LHVNPRKRQRVDISDAFIRAC  +E  FVF+PD  H LQ HD ++N L   +AL     N  QS+KD K
Sbjct:  114 MPTCDAPPVAYVARDDALVSDIKKLHVNPRKRQRVDISDAFIRACSGEENAFVFSPDHLHALQNHDNSSNPLSAQNALHATQQNTFQSKKDVK 206
The following BLAST results are available for this feature:
BLAST of Gvermi13446.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2S2_9FLOR5.430e-2762.37Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_9406contigScGOVlb_9406:1..277 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13446.t1Gvermi13446.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_9406 1..277 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13446.t1 ID=Gvermi13446.t1|Name=Gvermi13446.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=93bp
MPHGVGPAVAFVARNDALVSDIKTLHVNPRKRQRVDISDAFIRACRYDER
PFVFAPDLAHTLQPHDAANNALPPSALQGVPHNEPQSRKDAKX
back to top