Gvermi6418.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6418.t1
Unique NameGvermi6418.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length117
Homology
BLAST of Gvermi6418.t1 vs. uniprot
Match: A0A2V3IWW2_9FLOR (Protein BOBBER 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWW2_9FLOR)

HSP 1 Score: 183 bits (464), Expect = 6.110e-57
Identity = 84/115 (73.04%), Postives = 101/115 (87.83%), Query Frame = 0
Query:    2 LEGRLQHAVRADESFWQLDRQDLTLSLHLEKADALNWWSCVVDGHPAIDVSRIQPDSSRLDDLDGETRSMVEKMMYDQRQKAAGLPTSDEQQKLKLFENFKKQHPEMDFSQAKLQ 116
            +EG L +AVRADE +WQ+DRQD T+S+HLEK D +NWW CVV GH  +D+S+I+PD+SRLD+LD ETR MVEKMMYDQRQKAAGLPTSDEQQK++LFE FK++HPEMDFS AKLQ
Sbjct:   67 IEGHLSNAVRADECYWQIDRQDATVSIHLEKQDRMNWWPCVVQGHSCVDLSKIEPDNSRLDELDSETRGMVEKMMYDQRQKAAGLPTSDEQQKMQLFEKFKREHPEMDFSNAKLQ 181          
BLAST of Gvermi6418.t1 vs. uniprot
Match: UPI001E1D66F2 (protein BOBBER 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D66F2)

HSP 1 Score: 158 bits (400), Expect = 2.790e-47
Identity = 72/114 (63.16%), Postives = 96/114 (84.21%), Query Frame = 0
Query:    1 LLEGRLQHAVRADESFWQLDRQDLTLSLHLEKADALNWWSCVVDGHPAIDVSRIQPDSSRLDDLDGETRSMVEKMMYDQRQKAAGLPTSDEQQKLKLFENFKKQHPEMDFSQAK 114
            +L+G+L   V+AD+S WQ+DR+D T+ +HLEK D ++WW+CVV+G P IDVS+I+PD+S+L DLDGETR MVEKMMYDQR+KAAGLPTSDEQ++  + + F++QHPEMDF  AK
Sbjct:   59 ILDGKLGGTVKADDSMWQIDREDGTIIVHLEKKDRMSWWNCVVEGEPVIDVSKIEPDNSKLSDLDGETRGMVEKMMYDQRRKAAGLPTSDEQRQHDMLKKFQQQHPEMDFRNAK 172          
BLAST of Gvermi6418.t1 vs. uniprot
Match: A0A6T6N0E7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6N0E7_9RHOD)

HSP 1 Score: 150 bits (379), Expect = 4.860e-44
Identity = 71/114 (62.28%), Postives = 88/114 (77.19%), Query Frame = 0
Query:    1 LLEGRLQHAVRADESFWQLDRQDLTLSLHLEKADALNWWSCVVDGHPAIDVSRIQPDSSRLDDLDGETRSMVEKMMYDQRQKAAGLPTSDEQQKLKLFENFKKQHPEMDFSQAK 114
            +L G L   V ADESFWQLDR + TL L+LEK + + WW  VV G P +D ++++P++S+L DLDGETR MVEKMM+DQRQKA+GLPTSDE QK ++FE FK QHPEMDFS  K
Sbjct:   65 ILSGELFAKVNADESFWQLDRDESTLELYLEKQNKMEWWKSVVKGEPELDTTKVEPENSKLSDLDGETRGMVEKMMFDQRQKASGLPTSDELQKEQMFEKFKSQHPEMDFSNVK 178          
BLAST of Gvermi6418.t1 vs. uniprot
Match: A0A2S4L607_9HYPO (Nuclear movement protein nudC n=1 Tax=Tolypocladium paradoxum TaxID=94208 RepID=A0A2S4L607_9HYPO)

HSP 1 Score: 145 bits (366), Expect = 1.330e-41
Identity = 72/116 (62.07%), Postives = 90/116 (77.59%), Query Frame = 0
Query:    3 EGRLQHAVRADESFWQLDRQ---DLTLSLHLEKADALNWWSCVVDGHPAIDVSRIQPDSSRLDDLDGETRSMVEKMMYDQRQKAAGLPTSDEQQKLKLFENFKKQHPEMDFSQAKL 115
            +G L HAVR DES W L        T+ +HL+KA+ + WW+ VV   PAIDV++IQPDSS+L DLDGETR MVEKMM+DQRQK AGLPTSDEQQK+ + + F++QHPEMDFS+AK+
Sbjct:  101 QGDLPHAVRVDESTWTLSANADGTKTVEIHLDKANKMEWWAHVVTSAPAIDVTKIQPDSSKLSDLDGETRGMVEKMMFDQRQKEAGLPTSDEQQKMDILKKFQQQHPEMDFSKAKI 216          
BLAST of Gvermi6418.t1 vs. uniprot
Match: A0A2K3QGK0_9HYPO (Nuclear movement protein nudC n=1 Tax=Tolypocladium capitatum TaxID=45235 RepID=A0A2K3QGK0_9HYPO)

HSP 1 Score: 142 bits (357), Expect = 1.380e-40
Identity = 69/118 (58.47%), Postives = 91/118 (77.12%), Query Frame = 0
Query:    1 LLEGRLQHAVRADESFWQLDRQ---DLTLSLHLEKADALNWWSCVVDGHPAIDVSRIQPDSSRLDDLDGETRSMVEKMMYDQRQKAAGLPTSDEQQKLKLFENFKKQHPEMDFSQAKL 115
            ++EG L HAV  D+S W +        T+ +HL+KA+ + WW+ VV   PAIDV++IQP+SS+L DLDGETR MVEKMM+DQRQK AGLPTSDEQQK+ + + F++QHPEMDFS+AK+
Sbjct:   71 VVEGDLPHAVHVDDSTWTISANADGTKTVEIHLDKANKMEWWAHVVTSAPAIDVTKIQPESSKLSDLDGETRGMVEKMMFDQRQKEAGLPTSDEQQKMDILKKFQQQHPEMDFSKAKI 188          
BLAST of Gvermi6418.t1 vs. uniprot
Match: A0A0L0N3J6_TOLOC (Nuclear movement protein nudC n=1 Tax=Tolypocladium ophioglossoides (strain CBS 100239) TaxID=1163406 RepID=A0A0L0N3J6_TOLOC)

HSP 1 Score: 140 bits (352), Expect = 1.020e-39
Identity = 69/118 (58.47%), Postives = 90/118 (76.27%), Query Frame = 0
Query:    1 LLEGRLQHAVRADESFWQLDRQ---DLTLSLHLEKADALNWWSCVVDGHPAIDVSRIQPDSSRLDDLDGETRSMVEKMMYDQRQKAAGLPTSDEQQKLKLFENFKKQHPEMDFSQAKL 115
            +++G L HAV  D+S W L        T+ +HL+K + + WW+ VV   PAIDV++I+PDSS+L DLDGETR MVEKMM+DQRQK AGLPTSDEQQKL + + F++QHPEMDFS+AK+
Sbjct:   80 VIKGDLPHAVLVDDSTWTLSANADGTKTVEIHLDKTNKMEWWAHVVTSAPAIDVTKIRPDSSKLSDLDGETRGMVEKMMFDQRQKEAGLPTSDEQQKLDILKKFQQQHPEMDFSKAKI 197          
BLAST of Gvermi6418.t1 vs. uniprot
Match: A0A1Y1YIK1_9FUNG (Putative nudC protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YIK1_9FUNG)

HSP 1 Score: 139 bits (351), Expect = 1.250e-39
Identity = 68/116 (58.62%), Postives = 93/116 (80.17%), Query Frame = 0
Query:    1 LLEGRLQHAVRADESFWQL-DRQDLTLSLHLEKADALNWWSCVVDGHPAIDVSRIQPDSSRLDDLDGETRSMVEKMMYDQRQKAAGLPTSDEQQKLKLFENFKKQHPEMDFSQAKL 115
            ++EG L  AV+ D+S W L DR+++   +HLEK + + WW  VV  HP ID ++IQP++S+L+DLDGETR+MVEKMM+DQRQKA GLP+S+E +K+++FE FK+QHPEMDFSQ KL
Sbjct:   79 IVEGELCKAVKLDDSTWTLEDRKEV--QIHLEKVNGMEWWENVVTHHPKIDTTKIQPENSKLEDLDGETRTMVEKMMFDQRQKAMGLPSSEELKKMEMFEKFKQQHPEMDFSQVKL 192          
BLAST of Gvermi6418.t1 vs. uniprot
Match: A0A6G1IA31_9PEZI (CS-domain-containing protein n=1 Tax=Trichodelitschia bisporula TaxID=703511 RepID=A0A6G1IA31_9PEZI)

HSP 1 Score: 139 bits (350), Expect = 1.630e-39
Identity = 69/116 (59.48%), Postives = 88/116 (75.86%), Query Frame = 0
Query:    2 LEGRLQHAVRADESFWQLD--RQDLTLSLHLEKADALNWWSCVVDGHPAIDVSRIQPDSSRLDDLDGETRSMVEKMMYDQRQKAAGLPTSDEQQKLKLFENFKKQHPEMDFSQAKL 115
            ++G L   VR DE  W L+  + D  +S+HLEKA+ + WW+ VV   PAIDVS+IQP++S L DLDGETR MVEKMM+DQRQK  G PTSDEQ+KL + + F++QHPEMDFSQAK+
Sbjct:   74 IDGELPKPVRVDECTWTLEPVKDDKEISIHLEKANQMEWWAHVVTSAPAIDVSKIQPENSSLSDLDGETRQMVEKMMFDQRQKEMGKPTSDEQKKLDILKKFQEQHPEMDFSQAKI 189          
BLAST of Gvermi6418.t1 vs. uniprot
Match: E4ZST5_LEPMJ (Similar to nuclear movement protein nudC n=2 Tax=Leptosphaeriaceae TaxID=34374 RepID=E4ZST5_LEPMJ)

HSP 1 Score: 139 bits (350), Expect = 1.880e-39
Identity = 70/120 (58.33%), Postives = 86/120 (71.67%), Query Frame = 0
Query:    1 LLEGRLQHAVRADESFWQLDRQDLT-----LSLHLEKADALNWWSCVVDGHPAIDVSRIQPDSSRLDDLDGETRSMVEKMMYDQRQKAAGLPTSDEQQKLKLFENFKKQHPEMDFSQAKL 115
            L++G L HA+  D+S W L     +     +S+HL+K + L WW  VV   P IDV++I P++S+L DLDGETR MVEKMMYDQRQK AG PTSDEQ+KL L E FKKQHPEMDFS AK+
Sbjct:   75 LIDGELPHAIHVDDSTWTLTTLSTSPPQKEISIHLDKVNKLEWWPHVVTSAPKIDVTKITPENSKLSDLDGETRGMVEKMMYDQRQKEAGKPTSDEQKKLDLLEQFKKQHPEMDFSNAKM 194          
BLAST of Gvermi6418.t1 vs. uniprot
Match: A0A6A5QDD7_AMPQU (HSP20-like chaperone n=1 Tax=Ampelomyces quisqualis TaxID=50730 RepID=A0A6A5QDD7_AMPQU)

HSP 1 Score: 139 bits (349), Expect = 2.310e-39
Identity = 68/117 (58.12%), Postives = 86/117 (73.50%), Query Frame = 0
Query:    1 LLEGRLQHAVRADESFWQLD--RQDLTLSLHLEKADALNWWSCVVDGHPAIDVSRIQPDSSRLDDLDGETRSMVEKMMYDQRQKAAGLPTSDEQQKLKLFENFKKQHPEMDFSQAKL 115
            +++G+L HA+R DES W L        + +HL+K + L WW  V+   P ID S+IQP++S+L DLDGETR MVEKMM+DQRQK AG PTSDEQ+KL + E FKKQHPEMDFS AK+
Sbjct:   73 VIDGQLPHAIRVDESTWTLSPTAAGKDIEIHLDKQNQLEWWPHVITSAPKIDTSKIQPETSKLGDLDGETRGMVEKMMFDQRQKEAGKPTSDEQKKLDILEQFKKQHPEMDFSNAKM 189          
The following BLAST results are available for this feature:
BLAST of Gvermi6418.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWW2_9FLOR6.110e-5773.04Protein BOBBER 1 n=1 Tax=Gracilariopsis chorda Tax... [more]
UPI001E1D66F22.790e-4763.16protein BOBBER 1-like n=1 Tax=Mercenaria mercenari... [more]
A0A6T6N0E7_9RHOD4.860e-4462.28Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A2S4L607_9HYPO1.330e-4162.07Nuclear movement protein nudC n=1 Tax=Tolypocladiu... [more]
A0A2K3QGK0_9HYPO1.380e-4058.47Nuclear movement protein nudC n=1 Tax=Tolypocladiu... [more]
A0A0L0N3J6_TOLOC1.020e-3958.47Nuclear movement protein nudC n=1 Tax=Tolypocladiu... [more]
A0A1Y1YIK1_9FUNG1.250e-3958.62Putative nudC protein n=1 Tax=Basidiobolus meristo... [more]
A0A6G1IA31_9PEZI1.630e-3959.48CS-domain-containing protein n=1 Tax=Trichodelitsc... [more]
E4ZST5_LEPMJ1.880e-3958.33Similar to nuclear movement protein nudC n=2 Tax=L... [more]
A0A6A5QDD7_AMPQU2.310e-3958.12HSP20-like chaperone n=1 Tax=Ampelomyces quisquali... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 1..77
e-value: 5.8E-19
score: 70.4
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 2..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..98
NoneNo IPR availablePANTHERPTHR12356:SF3NUCLEAR MIGRATION PROTEIN NUDCcoord: 2..115
IPR037898NudC familyPANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 2..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:610570..610920 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6418.t1Gvermi6418.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 610570..610920 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6418.t1 ID=Gvermi6418.t1|Name=Gvermi6418.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=117bp
LLEGRLQHAVRADESFWQLDRQDLTLSLHLEKADALNWWSCVVDGHPAID
VSRIQPDSSRLDDLDGETRSMVEKMMYDQRQKAAGLPTSDEQQKLKLFEN
FKKQHPEMDFSQAKLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR037898NudC_fam