Gvermi6336.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6336.t1
Unique NameGvermi6336.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length406
Homology
BLAST of Gvermi6336.t1 vs. uniprot
Match: A0A2V3IF30_9FLOR (Ubiquinol oxidase 4, chloroplastic/chromoplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF30_9FLOR)

HSP 1 Score: 620 bits (1598), Expect = 1.030e-213
Identity = 309/406 (76.11%), Postives = 356/406 (87.68%), Query Frame = 0
Query:    1 LSSKSFRNRLGRGANKESLLTKAQELPEDEPNLPSIGTDRTEAARKKLE-----NGAEPQANIKSRKKGRRQHSSLFGKRSS-APAATASSDTSDSVEEEPKAPAVPAPLDILRTARISKKMFEGEIKHKYAPVQFTPFGQDWATDSFALVHNAIKAEVRDLQNMAYVMQKRKMLLTLNHIDIFYDWWADFNQFVEVAITIEEEVYYSWVGSKDYLRGPFKKSERMRVYGATRNAIQKVTEYKEKFLPYLPVGERLEGLLVLITGFDQLLQHYSDVAKSLPNYIHTLFNKKEKEANLKEIIAAFRNSDGYNRNLVLLAKWMPDRMMKRWALSHLRTKDLISFKGWRTMITREHCNVAAQFEDIITGEEDQTGEPVIGAAMAINEEMREHIDNNRSSVRAMANGNGV 400
            LSSKSFRNRLGRG+NKESLLTKA+E+ E  P LP +GTD+TEAARKKLE     + AE    +KSR+KG+RQHSSLFGKRSS + +A  SSDTSDSV E P  P  P PLDILRTARISKKMFEGEI HKYA VQ T +GQDWATDSFAL+HNA+KAE+R+L NMAYVMQ+RKMLLT+ H+++FY+WW+DF++F++VA+TIEEEVYY+WV SKDYLRG FK+SERMRVYGATR  IQ ++EYKEKFLPYLPVGERLEGLLVL+ GFDQLLQH+ +VA++LPNY+ TLFNKKEKEANLKEIIAAFRNSDGYNRNLVLL KWMPDRMMKRWALSHLRTK L+SFKGWR +IT+EHCN+A  FE++IT EE+  GEPVIGAAMAINEEMREHID NR+SVRA+ NGNGV
Sbjct:   75 LSSKSFRNRLGRGSNKESLLTKAKEVAESLPELPDVGTDKTEAARKKLEQSQKSSAAEGDKPLKSRRKGKRQHSSLFGKRSSTSSSANVSSDTSDSVNEAP--PPEPEPLDILRTARISKKMFEGEITHKYAQVQMTAYGQDWATDSFALLHNAMKAEIRELHNMAYVMQRRKMLLTMTHVEVFYEWWSDFHEFLDVALTIEEEVYYTWVSSKDYLRGAFKRSERMRVYGATRKCIQGISEYKEKFLPYLPVGERLEGLLVLMKGFDQLLQHHDEVARALPNYLQTLFNKKEKEANLKEIIAAFRNSDGYNRNLVLLVKWMPDRMMKRWALSHLRTKGLMSFKGWRNVITKEHCNLAKHFEEMITSEEENVGEPVIGAAMAINEEMREHIDKNRTSVRALPNGNGV 478          
BLAST of Gvermi6336.t1 vs. uniprot
Match: R7QDF4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDF4_CHOCR)

HSP 1 Score: 408 bits (1049), Expect = 2.640e-137
Identity = 219/416 (52.64%), Postives = 278/416 (66.83%), Query Frame = 0
Query:    1 LSSKSFRNRLGRGANKESLLTKAQELPEDEPNLPSIGTDRTEAARKKLENGAE-PQANIKSRKKGRR-------QHSSLFGKRSSAPAATASSDTSDSVEEEPKA-----------PAVPAPLDILRTARISKKMFEGEIKHKYAPVQFTPFGQDWATDSFALVHNAIKAEVRDLQNMAYVMQKRKMLLTLNHIDIFYDWWADFNQFVEVAITIEEEVYYSWVGSKDYLRGPFKKSERMRVYGATRNAIQKVTEYKEKFLPYLPVGERLEGLLVLITGFDQLLQHYSDVAKSLPNYIHTLFNKKEKEANLKEIIAAFRNSDGYNRNLVLLAKWMPDRMMKRWALSHLRTKDLISFKGWRTMITREHCNVAAQFEDIITGE-EDQTGEPVIGAAMAINEEMREHIDNNRSSVRAMAN 396
            LSSKSFRNR+     K  L  K  +LPE+   L              LE      +  ++  KK R        + S  F KR+++  A + SD SD  EEE              P   A +DILRTARISK     ++ +KY  V+ TP+G  WA DSFAL+HNAIKAE+RDL  +  VMQ+RK+LLT+ HI++FY+WWADF +F   A++IEE+V+Y+WV SKDYLRG FKK+ERMRV GATRN +  +++Y++KFLPYLPVGERL+GLLV    F  LL+HY  +A SLP YI TLF +KE++A +KE++A FR  DGYNRNLVLL +WMPDR M+RWALSHL+ KDLI FKGWR +I  EHC +A  FE+I+ G  E+  G PVIGAAMAINEEMREHI+ NR SVR++ N
Sbjct:   18 LSSKSFRNRI---TGKGDLFVKGPDLPEEVKELXXXXXXXXXXXXXXLEREEGLSKKELRKSKKARXXXXXKASRGSGRFSKRTNSKLAGSVSDISDGKEEEEDEGETMVTQLEPEPEPIAEMDILRTARISKTAVAMDLIYKYPEVKLTPYGSGWAMDSFALIHNAIKAEIRDLFEIGNVMQRRKLLLTMEHIEVFYEWWADFKEFTLEALSIEEDVFYTWVASKDYLRGAFKKTERMRVNGATRNLVTNISDYRDKFLPYLPVGERLDGLLVQFNEFKTLLEHYDAIAASLPAYIETLFKQKERDATVKELVAEFRRRDGYNRNLVLLVRWMPDRNMRRWALSHLKPKDLIHFKGWRRVIQEEHCRLALSFENIVMGPAEEDMGAPVIGAAMAINEEMREHINKNRVSVRSLPN 430          
BLAST of Gvermi6336.t1 vs. uniprot
Match: A0A1X6NIZ5_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIZ5_PORUM)

HSP 1 Score: 136 bits (342), Expect = 5.960e-34
Identity = 68/231 (29.44%), Postives = 120/231 (51.95%), Query Frame = 0
Query:  125 YAPVQFTPFGQDWATDSFALVHNAIKAEVRDLQNMAYVMQKRKMLLTLNHIDIFYDWWADFNQFVEVAITIEEEVYYSWVGSKDYLRGP-FKKSERMRVYGATRNAIQKVTEYKEKFLPYLPVGERLEGLLVLITGFDQLLQHYSDVAKSLPNYIHTLFNKKEKEANLKEIIAAFRNSDGYNRNLVLLAKWMPDRMMKRWALSHLRTKDLISFKGWRTMITREHCNVAAQF 354
            +  V   P+G +WA+D    +HNA++ E  DL  +  +MQ+++  LT + +D+F++WW DF  F   ++  E EV +  + ++  L     + S RM   G     ++KV++++  F P+LP GE L  L+ L+     +  +Y+    +LP  I   F K+ K +  + +    R +D Y+ NLVLL +W+      +W + +L+  + +SF GWR    R H  +   F
Sbjct:   16 FPKVSLAPYGTNWASDVVVFLHNAVRREFMDLYALLDLMQRKRRTLTHDLVDVFFEWWTDFETFCVASVNAETEVIFPPLTARTALTASAVRDSARMLANGKFVVGLRKVSDFRPSFTPHLPAGEVLPRLVALVAELSFIHGYYAAQEAALPPLIAAHFRKRNKASWERALTDHMRYADSYDMNLVLLTRWLRPSADTKWRVRNLKPAEHLSFGGWRRDAERNHLQIVDFF 246          
The following BLAST results are available for this feature:
BLAST of Gvermi6336.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IF30_9FLOR1.030e-21376.11Ubiquinol oxidase 4, chloroplastic/chromoplastic n... [more]
R7QDF4_CHOCR2.640e-13752.64Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NIZ5_PORUM5.960e-3429.44Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:126065..127282 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6336.t1Gvermi6336.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 126065..127282 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6336.t1 ID=Gvermi6336.t1|Name=Gvermi6336.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=406bp
LSSKSFRNRLGRGANKESLLTKAQELPEDEPNLPSIGTDRTEAARKKLEN
GAEPQANIKSRKKGRRQHSSLFGKRSSAPAATASSDTSDSVEEEPKAPAV
PAPLDILRTARISKKMFEGEIKHKYAPVQFTPFGQDWATDSFALVHNAIK
AEVRDLQNMAYVMQKRKMLLTLNHIDIFYDWWADFNQFVEVAITIEEEVY
YSWVGSKDYLRGPFKKSERMRVYGATRNAIQKVTEYKEKFLPYLPVGERL
EGLLVLITGFDQLLQHYSDVAKSLPNYIHTLFNKKEKEANLKEIIAAFRN
SDGYNRNLVLLAKWMPDRMMKRWALSHLRTKDLISFKGWRTMITREHCNV
AAQFEDIITGEEDQTGEPVIGAAMAINEEMREHIDNNRSSVRAMANGNGV
TAGKS*
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