Gvermi6662.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi6662.t1 vs. uniprot
Match: A0A2V3J090_9FLOR (BHLH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J090_9FLOR) HSP 1 Score: 364 bits (935), Expect = 3.630e-121 Identity = 202/378 (53.44%), Postives = 242/378 (64.02%), Query Frame = 0
Query: 10 DFPAHMVVFGDDSLPVEHQPDALQLPEMHASAVHLALEH--HQISALQPQAAKFHSQACVLPYHPILSTAHAELTSASANTLTDLNALSGTSIYGDCHSVDDSSA-----------HKAPVVQSAPDEPPPCNAAVRRNVSHTRRCRAKVNSKFESLLQVLPEPPPGTEVRHKAQILQHAIDCYRRVVCKNRQLEMKLALRSPAAMHRWVQSVVSTAPILKDALKSFMAMICLTNNWKYAELWRPQTRAGTSSVVLQYVTGALPPTVGGETLQRLRTYRQHSRKYRFAPRSGVPGRVFLTRRPEWLPLLSDPVAFLRAPHAVRNGVQVTFAVPVIVNGSVQMVVEFFDTDRRDYDHAALNVANEMASVFGKAFSQLQT 374
DFP + D P Q + L + + + L L + + L + K H Q +P + H+E S LT DC SVDDSS +R NVSHTRRCRAK+N+ F+ LLQVLP+PPPG EV+HKAQILQ+AID YR V CKN +LEM LAL S + MHRWVQSVV T+P L+D+LKSFMAMICLT NWKYAELW P T +SSV L Y +GALPPTV GE L RL+ YR SRKY FAPRSGVPGRVFLT RPEWLPLL+DPVAF RAPHAVRN V+VTFAVPV+VNGSV+MVV+F+DT RRDY+ A LN+ NE+A++FGKAF+ + +
Sbjct: 10 DFPKDIPPRDDHMFPTVQQATDIPLDQFASPPIDLTLSDTDNPTNTLYYHS-KLHPQPFFIPPQAAIEILHSEFASPLPFDLTLPEP--------DCQSVDDSSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRPNVSHTRRCRAKLNTNFDRLLQVLPKPPPGVEVKHKAQILQYAIDHYRHVRCKNVKLEMTLALSSRSHMHRWVQSVVHTSPNLRDSLKSFMAMICLTKNWKYAELWSPHTPTDSSSVALTYASGALPPTVEGEELHRLKAYRVKSRKYTFAPRSGVPGRVFLTMRPEWLPLLNDPVAFPRAPHAVRNRVEVTFAVPVVVNGSVKMVVQFYDTYRRDYEPATLNMTNEIAAMFGKAFTAINS 378
BLAST of Gvermi6662.t1 vs. uniprot
Match: R7QJ09_CHOCR (BHLH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ09_CHOCR) HSP 1 Score: 181 bits (460), Expect = 9.130e-51 Identity = 104/262 (39.69%), Postives = 145/262 (55.34%), Query Frame = 0
Query: 137 SHTRRCRAKVNSKFESLLQVLPEPPPGTEVRHKAQILQHAIDCYRRVVCKNRQLEMKLALRSPAAMHRWVQSVVSTAPILKDALKSFMAMICLTNNWKYAELWRPQTRAGTSSVV---LQYVTG---ALPPT--VGGETLQ---------------------RLRTYRQHSRKYRFAPRSGVPGRVFLTRRPEWLPLLSDPVAFLRAPHAVRNGVQVTFAVPVIVNGSVQMVVEFFDTDRRDYDHAALNVANEMASVFGKAF 369
SHTRRCRAKVN KF+ LL +LP PPP T ++HKAQIL +AI YR + + LE +LAL S + ++ WV +V + L+DAL ++++IC WKY+E W P + S V ++ V+G L PT + G T + +L +R SR Y+ R +PGRV T RPEWLP L+D AF RA A + V F VPV + G + V FFDTD+R YD +++A+ ++ + G AF
Sbjct: 46 SHTRRCRAKVNLKFQELLSILPTPPPKTGIKHKAQILDYAIRVYRDIHARKTLLEAELALSSRSQLNAWVDGIVLRSISLQDALAPYLSLICTKGGWKYSEAWIPAQQPIPSQPVRGKVEAVSGESNVLTPTTLLSGPTARLRLGLAVIPSLGNTDDPDLQTKLERFRDKSRAYQCKARVDLPGRVMCTMRPEWLPSLNDQEAFQRAHLAHNANLVVCFGVPVFICGHIAAVAVFFDTDQRAYDAKCVDLADNISGLLGNAF 307
BLAST of Gvermi6662.t1 vs. uniprot
Match: A0A2V3ILC3_9FLOR (BHLH domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILC3_9FLOR) HSP 1 Score: 178 bits (451), Expect = 4.420e-48 Identity = 98/260 (37.69%), Postives = 142/260 (54.62%), Query Frame = 0
Query: 139 TRRCRAKVNSKFESLLQVLPEPPPGTEVRHKAQILQHAIDCYRRVVCKNRQLEMKLALRSPAAMHRWVQSVVSTAPILKDALKSFMAMICLTNNWKYAELWRPQTRAG---TSSVVLQYVTG----------------------ALPPTVGG----ETLQRLRTYRQHSRKYRFAPRSGVPGRVFLTRRPEWLPLLSDPVAFLRAPHAVRNGVQVTFAVPVIVNGSVQMVVEFFDTDRRDYDHAALNVANEMASVFGKAF 369
TR+CRAKVNSKF+ LL +LP PP T ++HKAQIL++ I YR + + LE +LAL SP+ ++ W+ ++VS + L+DAL ++++IC WKY+E W P T+ L+ +TG A+ P++G + +L +R SR Y PR +PGR+ T RPEWLP L D AF RA A + V F VP+ + V V F+DTD+R YD L++A +A + G A+
Sbjct: 175 TRKCRAKVNSKFKELLGILPAPPANTGIKHKAQILEYTIRVYRDIHARKTLLEAELALSSPSQLNAWISNIVSRSRSLQDALAPYLSLICTKGAWKYSEAWVPLQEPESNTTNDSQLRAITGESRFLTPANMLLGPNARLRLGLAVIPSLGNTDDPDLQPKLERFRDRSRPYTCKPRVDLPGRIMCTMRPEWLPSLEDHEAFQRAKLARDASLVVCFGVPIFIGDHVAAVAVFYDTDQRTYDAKCLDLAVRVARMLGSAY 434
BLAST of Gvermi6662.t1 vs. uniprot
Match: A0A1X6PIG4_PORUM (BHLH domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIG4_PORUM) HSP 1 Score: 170 bits (430), Expect = 1.270e-43 Identity = 102/305 (33.44%), Postives = 155/305 (50.82%), Query Frame = 0
Query: 137 SHTRRCRAKVNSKFESLLQVLPEPPPGTEVRHKAQILQHAIDCYRRVVCKNRQLEMKLALRSPAAMHRWVQSVVSTAPILKDALKSFMAMICLTNNWKYAELWRPQ-TRA-------------------GTSSVVLQYVTGALP---PTVGG-------------------------------------------------ETLQRLRTYRQHSRKYRFAPRSGVPGRVFLTRRPEWLPLLSDPVAFLRAPHAVRNGVQVTFAVPVIVNGSVQMVVEFFDTDRRDYDHAALNVANEMASVFGKAF 369
SHTR+CRAKVN+KF+ LL +LP P +V+HKAQIL + I Y+R+ + QLE +LAL + A + WV +VV+++ L +AL+ ++ +I + ++YAELW PQ T+A G S V+ + + LP PT G T + + +R + PR G+PGRV+ + RPEWLP+LSDP AF+RA +A + + + AVPV++ G V V FFDT +R YD + + +A+++A++ G AF
Sbjct: 345 SHTRKCRAKVNTKFDELLTLLPPHPDSFQVKHKAQILDYTIHMYKRIQARKNQLEAELALSTRANLAAWVDTVVASSRTLPEALRPYLHLIAVQKRFRYAELWLPQPTKAEGMAAAKKAGANASLSLPSGDSIVLTRSMALVLPAPVPTAGQTDELSVGLGAPTGGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEENTTRAIEAFRDATASCVVPPRVGMPGRVYCSMRPEWLPMLSDPHAFIRAEYAANSKLSMCLAVPVLLCGRVAAVAAFFDTGKRPYDASVVGLAHDVANLVGNAF 649
BLAST of Gvermi6662.t1 vs. uniprot
Match: A0A7S1TET1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TET1_9RHOD) HSP 1 Score: 165 bits (418), Expect = 1.330e-42 Identity = 94/244 (38.52%), Postives = 137/244 (56.15%), Query Frame = 0
Query: 137 SHTRRCRAKVNSKFESLLQVLPEPPPGTEVRHKAQILQHAIDCYRRVVCKNRQLEMKLALRSPAAMHRWVQSVVSTAPILKDALKSFMAMICLTNNWKYAELWRP-QTRAGTSSVVLQYVTGALPPTVGG---ETLQ-------RLRTYRQHSRKYRFAPRSGVPGRVFLTRRPEWLPLLSDPVAFLRAPHAVRNGVQVTFAVPVIVNGSVQMVVEFFDTDRRDYDHAALNVANEMASVFGKAF 369
SHTRRCR KVN KF++L+ LP PP GTE++HKAQIL ++I + + + LE +LAL + + WV VV+ A DA+ F+ M+C WK AELW P + R S + Q T + E L+ R+ + SR+++F P G PGRV+ T RPEWL LSD F RA A + G+ ++P ++NG V+ VV +D ++R+ D L++A ++A + G AF
Sbjct: 269 SHTRRCREKVNEKFQTLMNELPPPPTGTEIKHKAQILDYSIRVLKDLASRKAALESELALSNRRNLLGWVDRVVNDAEDFPDAINPFLKMMCSKKAWKCAELWVPVEERVMVSCPLPQSETPTRLKLLRASFHENLEQDPPRHHRIHEFIDESRRFKFTPTCGSPGRVYSTMRPEWLHDLSDEQVFPRAELASKAGLVTCLSIPFLINGRVRGVVCLYDDEKRECDMGDLDLAFDIAILIGNAF 512
BLAST of Gvermi6662.t1 vs. uniprot
Match: A0A2V3J1B9_9FLOR (GAF domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1B9_9FLOR) HSP 1 Score: 130 bits (327), Expect = 8.890e-30 Identity = 93/282 (32.98%), Postives = 125/282 (44.33%), Query Frame = 0
Query: 106 SVDDSSAHKAPVVQSAPDEPPPCNAAVRRNVSHTRRCRAKVNSKFESLLQVLPEPPPGTEVRHKAQILQHAIDCYRRVVCKNRQLEMKLALRSPAAMHRWVQSVVSTA------------PILKDALKSFMAMICLTNNWKYAELW--RPQTR-AGTSSVVLQYVTGALPPTVGGETLQRLRTYRQHSRKYRFAPRSGVPGRVFLTRRPEWL-PLLSDPVAFLRAPHAVRNGVQVTFAVPVIVNGSVQMVVEFFDTDRRDYDHAALNVANEMASVFGKAFSQ 371
S + SS H AP P EPP SHTRRCR KV +FE LL+VLP P G EVRHKAQIL + I+ +R ++ + L +AL S + +W S + A P + L FM C+ N+W YAE W P T+ A S + + + Y S SGV R T+RPEWL + D F RA A ++ VQ+ AVPV+ V+ F T R + A ++ A + G+ F Q
Sbjct: 205 SQNSSSIHVAPNSPGTPAEPPK---------SHTRRCREKVTRQFEHLLEVLPPPSRGVEVRHKAQILDYTINVFRSLLARRTFLHTHIALASNHTLRQWANSTLLRASAAVKSDSFAQSPSIASLLHPFMRFYCVKNSWSYAETWILTPDTKHAALHSCFVNSDDSNVSKNLDAFATASKARYGAASEIV-----SGVVSRARQTKRPEWLVDIADDQCVFDRAALAAQHDVQIALAVPVVAENMCLAVIVFAHTTPRTFSAAEVDQLFGFAFILGQRFVQ 472
BLAST of Gvermi6662.t1 vs. uniprot
Match: A0A2V3IQR8_9FLOR (BHLH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR8_9FLOR) HSP 1 Score: 122 bits (305), Expect = 1.270e-27 Identity = 85/242 (35.12%), Postives = 120/242 (49.59%), Query Frame = 0
Query: 137 SHTRRCRAKVNSKFESLLQVLPEPPPGTEVRHKAQILQHAIDCYRRVVCKNRQLEMKLALRSPAAMHRWVQSVVSTAPILKDALKSFMAMICLTNNWKYAELWRPQTRAGTSSVVLQYVTGALPPTVGGETLQRLRTYRQHSRKYRFAPRSGVPGRVFLTRRPEWL--PLLSDPVAFLRAPHAVRNGVQVTFAVPVIVNGSVQMVVEFFDTDRRDYDHAALNVANEMASVFGKAFSQLQTYA 376
+HTRRCRA++N +F++L +LP P EV+HK IL HAI + + +N L++ LALRS + +WV S V TA ++ AL F++++C T W YAE+W Q + L + T T+ L L + FA G+ F TR P W P+ VA RA +Q FAVP+ V G V VV FFD +R+ D + A A G A++ Q A
Sbjct: 153 THTRRCRARLNGRFDTLNNILPRSPT-VEVKHKVHILDHAITALQEMHQQNANLQLLLALRSRPRLVKWVDSFVPTASSIQQALDPFISLVCHTAAWPYAEVWHAQP----PHINLIH-TSPRATTMHFPALNHLAHVSAAQTQLCFA--DDFVGKCFETRVPRWSCSPVQQCQVA-QRAQLLAAARIQCAFAVPIPVAGDVSHVVAFFDVRQRERDTTQVQFAAFAAVCVGNAWAAKQASA 385
BLAST of Gvermi6662.t1 vs. uniprot
Match: UPI001683F77F (diguanylate cyclase n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI001683F77F) HSP 1 Score: 81.6 bits (200), Expect = 3.280e-13 Identity = 51/204 (25.00%), Postives = 97/204 (47.55%), Query Frame = 0
Query: 180 YRRVVCKNRQLEMKLALRSPAAMHR----WVQSVVSTAPILKDALKSFMAMICLTNNWKYAELWRPQTRAGTSSVVLQYVTGALPPTVGG-ETLQRLRTYRQHSRKYRFAPRSGVPGRVFLTRRPEWLPLLS--DPVAFLRAPHAVRNGVQVTFAVPVIVNGSVQMVVEFFDTDRRDYDHAALNVANEMASVFGKAFSQLQTYA 376
Y ++ +N L+ ++ R A + +S + L AL+ + +C T +W + E W P G L + G T + L+ +R +S K F P +G+PGRV+++++PEW+ +S FLR+ A+ G++ VP++++ V V+ FF T++R + + + N +A+ G + + A
Sbjct: 134 YNQLATQNAVLQQQIQERQRAEAETNLLLQITQAISKSSDLDSALEVTLQQVCETISWNFGEAWIPND------------DGFLECSCGWYATTESLQEFRYYSEKLTFTPHTGLPGRVWMSQKPEWIENVSLEQNQLFLRSDIALEAGLKTALGVPLVLDDQVLAVLVFFKTEQRKPEERLIELVNAVATQLGSLIQRKKAEA 325
BLAST of Gvermi6662.t1 vs. uniprot
Match: A0A7V5V8N0_9DELT (Histidine kinase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V5V8N0_9DELT) HSP 1 Score: 82.0 bits (201), Expect = 3.340e-13 Identity = 59/232 (25.43%), Postives = 101/232 (43.53%), Query Frame = 0
Query: 139 TRRCRAKV-NSKFESLLQVLPEPPPGTEVRHKAQILQHAIDCYRRVVCKNRQLEMKLALRSPAAMHRWVQSVVSTAPILKDALKSFMAMICLTNNWKYAELWRPQTRAGTSSVVLQYVTGALPPTVGGETLQR-LRTYRQHSRKYRFAPRSGVPGRVFLTRRPEWLPLLS--DPVAFLRAPHAVRNGVQVTFAVPVIVNGSVQMVVEFFDTDRRDYDHAALNVANEMASVFG 366
TRR A +S L++ L G ++ + ++ R VV R + + + + + +S A +AL + M+ +W Y E W R TGAL + T L +R+ S ++RF P G+PGRV+ + RPEW+P +S FLR A+ G++ +P++ +G V V+ FF R+ D + + + +A+ G
Sbjct: 184 TRRAMAAAADSGGSFLVETLWTTKAGARIQVEVSGRAVSVGGERVVVLTGRDITGRKRAEDEMRLLQRMTRAISEADDFDEALGVALRMVSDATSWHYGEAWTMNAR-----------TGALELSPAWYTCHTSLHAFRKESERFRFEPHVGLPGRVWASGRPEWIPDVSATSEKVFLRTSLALETGLKAALGIPIVASGEVLAVLVFFMFQSREEDRRLIELVSTVAAQLG 404
BLAST of Gvermi6662.t1 vs. uniprot
Match: A0A1F2R4Y1_9BACT (PAS domain-containing protein n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15 TaxID=1797181 RepID=A0A1F2R4Y1_9BACT) HSP 1 Score: 78.2 bits (191), Expect = 7.970e-13 Identity = 52/159 (32.70%), Postives = 75/159 (47.17%), Query Frame = 0
Query: 209 VVSTAPILKDALKSFMAMICLTNNWKYAELWRPQTRAGTSSVVLQYVTGALPPTVGGETLQRLRTYRQHSRKYRFAPRSGVPGRVFLTRRPEWLPLLSDPVAFLRAPHAVRNGVQVTFAVPVIVNGSVQMVVEFFDTDRRDYDHAALNVANEMASVFGK 367
V++TA L DA + IC T NW++A +WR +A VL+ V P V R + SR FAP G+PG V+ + RP W+P + F RAP A G F P+++ V V+EFF + R+ D A L + + G+
Sbjct: 27 VLATAAHLSDATPRILEAICTTLNWEHATVWRVDRQAS----VLRCVEIWHQPDV------RFAKFEALSRGMTFAPGIGLPGSVWSSGRPLWIPDVVHHDNFPRAPIAAAEGPHAAFGFPIMLGPEVLGVMEFFSREIREPDEALLAMLGTIGHQIGQ 175 The following BLAST results are available for this feature:
BLAST of Gvermi6662.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6662.t1 ID=Gvermi6662.t1|Name=Gvermi6662.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=380bpback to top |