Gvermi6716.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi6716.t1
Unique Name	Gvermi6716.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	258

Homology

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BLAST of Gvermi6716.t1 vs. uniprot
Match: A0A2V3J3S3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3S3_9FLOR)

HSP 1 Score: 382 bits (981), Expect = 4.860e-132
Identity = 175/259 (67.57%), Postives = 219/259 (84.56%), Query Frame = 0

Query:    1 MWAGNRANRASALVCALPR--YPASSRLVAARVDTEHSTGMGKFALTGRYASRNDSFGIDATYAIDDANTVYATYGVTDEKLLALGVETGFTAFSRHGTVDLTYNPPRDAAVLKAAVRQGKFRVSALLSFDKFKKDHVKNHAESYELEAKISSTENLKIAFNGKSRAAKIKLSHRLDAKNKLDAEYHHLVGGSKAIVFTLKHVYSKAHTFALGFNYGANKCKAEWDCRTDNGPWTITTSFPFNASPLSGDLSIKRRFDF 257
            MW  N+  + + ++CALP   +  + RLVAAR+DT+H TG GK A+TGRY S+ D+FGIDA YAIDDA+T+YA+YGVT+EKL+ALG+E+GFTAF +  T DLTYNPP+D+A LKAAVRQGK +++ + SFD  KKD VKNH+E YE++AKIS +E+LK++F+GKSRAAK+KLS +LD KNKLDAEYHH+  GSKA+V TLKH Y+KAHTF+LGFNYG  KCK EWDC+T+NGPWT+TT+FPFNASPLSGDLSIKRRFDF
Sbjct:    1 MWPWNQTTQLNPVICALPNPSFKGAGRLVAARIDTDHPTGKGKVAITGRYTSKKDAFGIDAAYAIDDAHTIYASYGVTEEKLVALGIESGFTAFGKRSTFDLTYNPPKDSATLKAAVRQGKLKLTGIFSFDSLKKDTVKNHSERYEVDAKISGSESLKMSFDGKSRAAKVKLSRKLDPKNKLDAEYHHISAGSKAVVLTLKHAYNKAHTFSLGFNYGGKKCKVEWDCKTENGPWTVTTNFPFNASPLSGDLSIKRRFDF 259

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BLAST of Gvermi6716.t1 vs. uniprot
Match: R7QSY7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSY7_CHOCR)

HSP 1 Score: 294 bits (753), Expect = 2.130e-97
Identity = 136/232 (58.62%), Postives = 181/232 (78.02%), Query Frame = 0

Query:   26 LVAARVDTEHSTGMGKFALTGRYASRNDSFGIDATYAIDDANTVYATYGVTDEKLLALGVETGFTAFSRHGTVDLTYNPPRDAAVLKAAVRQGKFRVSALLSFDKFKKDHVKNHAESYELEAKISSTENLKIAFNGKSRAAKIKLSHRLDAKNKLDAEYHHLVGGSKAIVFTLKHVYSKAHTFALGFNYGANKCKAEWDCRTDNGPWTITTSFPFNASPLSGDLSIKRRFDF 257
            LVAAR DT+H+TG G+ A+TGRY SR DSF +DA YAIDD NT YATYGVTDEKL+ LG+ETGFTA+ R  T+D+TYNPP+D+A +K AVRQGK +++A  +F   +   + +H+E YEL+AK+S  E+LK++F+GKS+A+K+K+S +LD KNKL+A Y++    S++   T KH YSK HT ++  +YG  K KAEWDC+TDNGPWT+TT+FPFNASP  G+  IKRRF+F
Sbjct:   26 LVAARADTDHTTGPGQVAITGRYDSRKDSFAVDAAYAIDDNNTAYATYGVTDEKLVDLGLETGFTAYGRRNTLDMTYNPPKDSASIKLAVRQGKTKITAASTFYNIQSSKLSDHSERYELDAKLSGVESLKMSFDGKSKASKVKVSRKLDPKNKLEAVYNYKDHTSRSASLTFKHQYSKIHTLSIATDYGDRKFKAEWDCKTDNGPWTVTTAFPFNASPHKGEWKIKRRFEF 257

The following BLAST results are available for this feature:

BLAST of Gvermi6716.t1 vs. uniprot

BLAST of Gvermi6716.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J3S3_9FLOR	4.860e-132	67.57	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QSY7_CHOCR	2.130e-97	58.62	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..29
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 10..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..9
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..29
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 30..257

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_88	contig	ScGOVlb_88:2082010..2082977 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi6716.t1	Gvermi6716.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_88 2082010..2082977 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi6716.t1 ID=Gvermi6716.t1|Name=Gvermi6716.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=258bp
MWAGNRANRASALVCALPRYPASSRLVAARVDTEHSTGMGKFALTGRYAS
RNDSFGIDATYAIDDANTVYATYGVTDEKLLALGVETGFTAFSRHGTVDL
TYNPPRDAAVLKAAVRQGKFRVSALLSFDKFKKDHVKNHAESYELEAKIS
STENLKIAFNGKSRAAKIKLSHRLDAKNKLDAEYHHLVGGSKAIVFTLKH
VYSKAHTFALGFNYGANKCKAEWDCRTDNGPWTITTSFPFNASPLSGDLS
IKRRFDF*