Gvermi6732.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6732.t1
Unique NameGvermi6732.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length153
Homology
[Close]
BLAST of Gvermi6732.t1 vs. uniprot
Match: A0A2V3J3X7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3X7_9FLOR)

HSP 1 Score: 174 bits (441), Expect = 6.930e-52
Identity = 88/153 (57.52%), Postives = 119/153 (77.78%), Query Frame = 0 
Query:    1 MPVEDRAGDEEVTVWLVASKEKGGILLRGRATGFLKRSCDRCGSAFDEKSDGVFDVLLKSELEDVDESLYDDVKEVESDEIQVFGHVRDALYLGMQTRALCTEDCVGINPRN-EAGTMDDELSGNLRKEGTIGERAAGSVLLEMKKRLEQRGL 152
            MP EDRA DE+V VWLVA++ KGG+LLRGRA G+LKR CDRCG++F+E +DG FDVLL    E+VDESL++DV+ VESDEI++  HVRDALYLG+++RA+C E C G++ +N E  ++       +  E TIG+R+AG  L+EMK++LE+RGL
Sbjct:  101 MPKEDRADDEQVGVWLVATRAKGGLLLRGRAKGWLKRMCDRCGNSFEELADGTFDVLLNEGEEEVDESLFEDVQTVESDEIEMSRHVRDALYLGLKSRAICNEQCGGVSVQNGEQWSVFKSGDQRIDAEETIGDRSAGDRLMEMKRKLEERGL 253
The following BLAST results are available for this feature:
BLAST of Gvermi6732.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3X7_9FLOR6.930e-5257.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003772Large ribosomal RNA subunit accumulation protein YceDPFAMPF02620YceDcoord: 27..119
e-value: 1.2E-8
score: 35.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2113965..2114423 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6732.t1Gvermi6732.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2113965..2114423 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6732.t1 ID=Gvermi6732.t1|Name=Gvermi6732.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=153bp
MPVEDRAGDEEVTVWLVASKEKGGILLRGRATGFLKRSCDRCGSAFDEKS
DGVFDVLLKSELEDVDESLYDDVKEVESDEIQVFGHVRDALYLGMQTRAL
CTEDCVGINPRNEAGTMDDELSGNLRKEGTIGERAAGSVLLEMKKRLEQR
GL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003772YceD