Gvermi6798.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6798.t1
Unique NameGvermi6798.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length215
Homology
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BLAST of Gvermi6798.t1 vs. uniprot
Match: A0A2V3IFQ1_9FLOR (RNase NYN domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFQ1_9FLOR)

HSP 1 Score: 67.0 bits (162), Expect = 8.930e-10
Identity = 45/130 (34.62%), Postives = 73/130 (56.15%), Query Frame = 0 
Query:   34 SSSAKEKKKLFRHPAAIKARAEYDVVIDGLNVGKEYSVRRRFRTKGIERALEYFERQGKRPVAILPN---DFGG-----GDDPKRMRKLVDQGRVLMVGKKVKHEKFHDYNVILYGVRNNAAIISNNKYR 155
            S+ A EK    RH ++ K   +YD+VIDG NVG  +  +R FR+  + RAL+Y+ +QG +P+A +P    DF        DDP  ++ L + G V  +   V   +FH ++V+ Y  + +  ++SN KY+
Sbjct:  107 SAHASEK----RHTSSAKHADDYDIVIDGENVGNFHGSKR-FRSVNVVRALKYYHKQGLKPLAFVPRRCVDFRFQENRLADDPCVLKLLEEHGLVCFI---VDELEFH-WHVVEYAAQRDIPLVSNRKYK 227
The following BLAST results are available for this feature:
BLAST of Gvermi6798.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFQ1_9FLOR8.930e-1034.62RNase NYN domain-containing protein n=1 Tax=Gracil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..40
NoneNo IPR availableGENE3D3.40.50.11980coord: 56..199
e-value: 4.5E-18
score: 67.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
IPR021869Ribonuclease Zc3h12a-like, NYN domainPFAMPF11977RNase_Zc3h12acoord: 58..189
e-value: 8.4E-13
score: 48.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2330266..2330910 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6798.t1Gvermi6798.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2330266..2330910 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6798.t1 ID=Gvermi6798.t1|Name=Gvermi6798.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=215bp
MNFSGVAKLKSTDKNHETKKKNETKKKNETKRNSSSAKEKKKLFRHPAAI
KARAEYDVVIDGLNVGKEYSVRRRFRTKGIERALEYFERQGKRPVAILPN
DFGGGDDPKRMRKLVDQGRVLMVGKKVKHEKFHDYNVILYGVRNNAAIIS
NNKYRAAPYNKLKIEQYVLQDKFLVPCAFIKRQFIPNPDPAHLADVMKYT
TRTSHLKDVMGLHV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021869RNase_Zc3h12_NYN