Gvermi6757.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6757.t1
Unique NameGvermi6757.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length242
Homology
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BLAST of Gvermi6757.t1 vs. uniprot
Match: A0A2V3J3W8_9FLOR (Glycolipid transfer protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3W8_9FLOR)

HSP 1 Score: 328 bits (842), Expect = 2.190e-111
Identity = 161/229 (70.31%), Postives = 189/229 (82.53%), Query Frame = 0 
Query:   13 TSSTITVNTEAIHTPFSCITQPFYHAIHDADDKNLCFPKGDINVELFNRAVSGFLTIFDALGCPIITEIVRRDFRGKTNGLRNSSRRLRAQTLRELVRNEIKSPPRFWAASGIECLQWCQRILSFIEQLVQHLADDERMELKEACIRAYRDTLALRHPNVTKAIFERALQLVPPRKQFVSNLCQSEQEANDEQVALCLVGMKDFLKAVRPHINALQTLFEIEDIDDMRR 241
            T+ST+TV T+AIHTPFSCI  PFYHAIH+A      F KGDINV+++N A++ FLTIFDALG PIITEIVRRDFR KTNGLRNS+RRLRA TLR+LV NE+KSPPRFWA SGI+ L W QRIL FI+++VQ L DD + ELKEACI AYR+TLALRHP++TK IFERALQLVPPRKQF++NLC SE   +DE + LCLVGM+DFL A RPH +AL TLFE+E I+D  R
Sbjct:   17 TTSTLTVTTDAIHTPFSCINHPFYHAIHEAHSNQRSFQKGDINVDIYNTAITAFLTIFDALGSPIITEIVRRDFRAKTNGLRNSARRLRAHTLRQLVVNELKSPPRFWAPSGIQSLLWSQRILHFIQRMVQLLVDDAQRELKEACIMAYRETLALRHPHMTKVIFERALQLVPPRKQFLTNLCDSEC-LSDEDIKLCLVGMEDFLNATRPHTSALATLFEMEQIEDPPR 244
The following BLAST results are available for this feature:
BLAST of Gvermi6757.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3W8_9FLOR2.190e-11170.31Glycolipid transfer protein n=1 Tax=Gracilariopsis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014830Glycolipid transfer protein domainPFAMPF08718GLTPcoord: 54..196
e-value: 1.2E-23
score: 83.9
IPR036497Glycolipid transfer protein superfamilyGENE3D1.10.3520.10Glycolipid transfer proteincoord: 34..240
e-value: 3.0E-35
score: 123.7
IPR036497Glycolipid transfer protein superfamilySUPERFAMILY110004Glycolipid transfer protein, GLTPcoord: 47..239
NoneNo IPR availablePANTHERPTHR10219GLYCOLIPID TRANSFER PROTEIN-RELATEDcoord: 48..225
NoneNo IPR availablePANTHERPTHR10219:SF25GLYCOLIPID TRANSFER PROTEINcoord: 48..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2166921..2167646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6757.t1Gvermi6757.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2166921..2167646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6757.t1 ID=Gvermi6757.t1|Name=Gvermi6757.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=242bp
MNHTPVKQLTAVTSSTITVNTEAIHTPFSCITQPFYHAIHDADDKNLCFP
KGDINVELFNRAVSGFLTIFDALGCPIITEIVRRDFRGKTNGLRNSSRRL
RAQTLRELVRNEIKSPPRFWAASGIECLQWCQRILSFIEQLVQHLADDER
MELKEACIRAYRDTLALRHPNVTKAIFERALQLVPPRKQFVSNLCQSEQE
ANDEQVALCLVGMKDFLKAVRPHINALQTLFEIEDIDDMRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014830Glycolipid_transfer_prot_dom
IPR036497GLTP_sf