Gvermi1852.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi1852.t1
Unique NameGvermi1852.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length423
Homology
BLAST of Gvermi1852.t1 vs. uniprot
Match: A0A2V3IDQ9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDQ9_9FLOR)

HSP 1 Score: 355 bits (910), Expect = 3.220e-116
Identity = 198/427 (46.37%), Postives = 269/427 (63.00%), Query Frame = 0
Query:    2 ISLLIFLGVLAISVEVRAQAPTCRDRGLFSHVRCESLWPNEECTAAAQFGCLVSGCDCVLNQTIADSNPCPNNERPID--ALSLSSPRSSVNFRMGVNLLDNRLNVLLLIDASPSMAAQFPTVLPELSALAHELIVNLSAIVAVAVYGGEQSFDTFDA-FQTLQSFTSNASAIQSALRTIPTLTLQNGPRLLLRAIEDSRSAN-IGWTGFNARRIIIVVGDTPGREPACATSDFQKVLNRSTLFDFLDLGFTKFSFIAASVGQPGLDAALPQLPQCPFRPLCLLVFCQRSEPALGVAVAPGQLSTLASRANGSFISNFSKTAVYEAVLDILQQP--KFQPIDGLLFRDTEDAITPVSMDTCGNRVVVERPSLPKVLPALSFLTIDFTVSLADRACDDGPFDCTLTIAESRNSTFVFELEMLSVKACF 422
            IS  + + V++I +      P CR+ GLF+HV CE L    +C  A Q GC+    +C L+  +A  NPCPNNE P++   LSLS+P   V+FRM VNLLD  L+VL L+DASPSM    P V+ E S LA  +   LSAI+AVAVY GE SF  +   +  LQS TSN SA+++AL+ IP+L ++  PR LL AI+ +R A  IGW G NARRI++V GDTPGR+P C  SD++    R ++F+     F++ + IAASVGQPGLD AL +LPQCPF P C  V+C    P  G  VA GQLS L +   G  ++    +A++ A L ++  P  +F+ IDG+L+R T +       DTCGNR+V++ PSLP  +PALS  T+DF+V+L++  CD GPF C L I ESR +  V +L+   V+ CF
Sbjct:    6 ISFYVVVVVVSILLPCCTAQPKCREAGLFAHVLCEGL-SETQCEPAKQHGCISLDGNCTLDPDLARINPCPNNEYPVNDFVLSLSNP---VSFRMSVNLLDASLSVLFLVDASPSMRDHLPKVITEFSTLATAMTKKLSAIIAVAVYAGEASFSRYGPPYLPLQSMTSNVSAVRNALQFIPSLQMKTVPRTLLNAIDKARYAQTIGWRGTNARRIVVVAGDTPGRDPTCTKSDYEPARTRFSIFN----EFSETALIAASVGQPGLDGALAKLPQCPFSPSCSPVYCTPLPPDEGEQVAAGQLSALVNATKGLLLTGVDASALFRAALRVVNSPGRRFKAIDGVLYRLTAE----YGYDTCGNRIVIQSPSLPLRVPALSVTTVDFSVALSENGCDGGPFVCHLGIGESRTNGSVLQLQRFLVRGCF 420          
BLAST of Gvermi1852.t1 vs. uniprot
Match: A0A2V3IME3_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME3_9FLOR)

HSP 1 Score: 152 bits (385), Expect = 2.920e-38
Identity = 129/430 (30.00%), Postives = 195/430 (45.35%), Query Frame = 0
Query:    5 LIFLGVLAISVEVRAQA-----PTCRDRGLFSHVRCES----LWPN--EECTAAAQFGCLVSGCD-----CVLNQTIADSNPCPNNERPIDALSLSSPRSSVNFRMGVNLLDNRLNVLLLIDASPSMAAQFPTVLPELSALAHELIVNLSAIVAVAVYGGEQSFDTFDAFQTLQSFTSNASAIQSALRTIPTLTLQNGPRLLLRAIEDSRSANIGWTGFNARRIIIVVGDTPGREPACATS-DFQKVLNRSTLFDFLDLGFTKFSFIAASVGQPGLDAALPQLPQCPFRPLCLLVFCQRSEPALGVAVAPGQLSTLASRANGSFISNFSKTAVYEAVLDILQQPKF---QP------IDGLLFRDTEDAITPVSM---DTCGNRVVVERPSLPKVLPALSFLTIDFTVSLADRACDDGPFDCTLTIAESR 405
            LI + +L +S+   AQA     P CR + +F  V CES     +PN    C+  AQFGC    C      C LN  +   NPCPN E P+ +++L+S    V+F + +NL     +V+LLID S S       +  ELS+   +L  N SA V VAVYG E+S+D       L + T        AL +IP     +G R  + A++   S+  G      +RII+++GD PGREP C    +   VL  ST+             I+ S+G  GL++ALP    C        +     +P+    +A GQ   + +R NG  +   +  ++  AV  + ++P +   +P      +    F       TP      + CGN+V +    LP  + A + +T    V+L    C  GPF C + + E R
Sbjct:    4 LISVIILVVSLTSGAQAIEYWGPQCRRKNVFPFVTCESKCFSYYPNFGSGCSQKAQFGCEYKKCSSSSYRCALNPAVEKDNPCPNGEVPVKSINLTS---FVDFNLAINLRGYSTDVVLLIDTSSSTRPHLKAIKNELSSFVRQL--NGSAKVGVAVYGSEESYDE-SGLSVLSAVTDYVDPALEALESIPETV--DGTRTTITALKTLSSSVAGLNLRGNKRIIVLIGDRPGREPDCRNGYNRDMVLPSSTM-------------ISVSLGSDGLNSALPAPSAC--------MNGSYYDPS---PIAVGQARDIVNRTNGEVVEIVTAASLLWAVDTVRRRPVYWYNRPPGSNIRVSSASFPLYRGPYTPPVQRYSNGCGNKVYLRTSGLPAFISAPAEVTASVHVALPKGVCIHGPFTCEIRVVEIR 401          
BLAST of Gvermi1852.t1 vs. uniprot
Match: A0A2V3IGI2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGI2_9FLOR)

HSP 1 Score: 129 bits (324), Expect = 1.000e-29
Identity = 120/421 (28.50%), Postives = 194/421 (46.08%), Query Frame = 0
Query:   18 RAQAPTCRDRGLFSHVR----CESLWPN---EECTAAAQFGCLVSGCD-----CVLNQTIADSNPCPNNERPIDALSLSSPRSSVNFRMGVNLLDNRLNVLLLIDASPSMAAQFPTVLPELSALAHELIVNLSAIVAVAVYGGEQSFDTFDAFQTLQSFTSN-ASAIQSALRTIPTLTLQNGPRLLLRAIEDSRSANIGWTGFNARRIIIVVGDTPGREPACATSDFQKVLNRSTLFDFLDLGFTKFSFIAASVGQPGLDAALPQLPQCPFRPLCLLVFCQRSEPALGVAVAPGQLSTLASRANGSFISNFSKTAVYEAVLDILQ-------QPKF------QPIDGLLFRDTEDAITPVSMD---TCGNRVVVERPSLPKVLPALSFLTIDFTVSLADRACDDGPFDCTLTIAESRNSTF 409
            R  +  CR    F H+     C   +      +C  A+Q+G   S C      C L + IA +N CPN E P+  + ++  R +    +G+N+    L+V+LL+DA  S   +   + P++ +   +L  +++  + ++V G E+SFD       LQ  T+N A A+QS         + +GPR  LR +  S +  +G+   + ++I+++VGDT GREP C    F +     T F     G  +FS +A S+G PGL+A LP   Q P         C R  P +  AV   Q ST+A+   G+F+  F    + + V+++ +       QP        QP     FR    ++    +    T GNR  +  P            T+  ++SLA+  C DGPF C +T++  RN+ F
Sbjct:   17 RLISAQCRQDFFFPHITSPFGCTGNFTGFQVSDCLVASQWGYEFSPCGEESFACSLKREIAANNSCPNAELPVSTVRVNLNRPTF-VSLGINVPRPTLDVILLLDAVSSTRERIIALKPQIVSFIRQL-EDVAENIHISVSGTEESFDQRGT-SVLQRTTNNFAEAVQSLDEFERLPPIPDGPRASLRFLLPSITNTVGFR--SEQQIVVLVGDTSGREPTCVFDRFDR-----TSFPSRFSG-GQFSVVAVSIGDPGLNAPLPT--QAP---------CTRFTPFVE-AVTANQASTIANLTQGAFVEGFDADTLLQTVMNVSRNAPGNFGQPTGFDISVPQPFSN--FRRPFPSVCDGRVQFNSTMGNRFFLAGPLET---------TVQLSISLANSGCMDGPFQCPVTVSAFRNNQF 403          
BLAST of Gvermi1852.t1 vs. uniprot
Match: A0A2V3IEV7_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV7_9FLOR)

HSP 1 Score: 86.3 bits (212), Expect = 5.280e-15
Identity = 85/361 (23.55%), Postives = 148/361 (41.00%), Query Frame = 0
Query:   90 VNFRMGVNLLDNRLNVLLLIDASPSMAAQFPTVLPELSALAHELIVNLSAIVAVAVYGGEQSFDTFDAFQTLQSFTSNASAIQSALRTIPTLTLQNGPRLLLRA---IEDSRSANIGWTGFNARRIIIVVGDTPGREPACATSDFQKVLNRSTLFDFLDLGFTKFSFIAASVGQPGLDAALPQLPQCPFRPLCLLVFCQRSEPALGVAVAPGQLSTLASRANGSFISNFSKTAVYEAVLDILQQPKFQPIDGLLFRDTEDAITP------------------VSMDTCGNRVVVERPSLPKVLPALSFLTIDFTVSLADRACDDGPFDCTLTIAESRNSTFVFE--------LEMLSVKAC 421
            ++  + +N+  +  ++++L+DAS S  A+   V  +L +    L       V+VA YGGE           L++ TS+ +    AL  IP +   +GPR  + A   I   +   I    F  RRII++VGDTPGREP C               D +     +   +  ++  PGL+AALP    C +                  A+  GQ + LA  + G  IS  + + + E++L +    +    +GL  + +  ++                    ++   C +RV++ + ++P        +T   ++SL    C  GPF C + + E R   F +           ++ VKAC
Sbjct:   13 IDISLDINVPGDTQDIVMLVDASQSTRAKLNNVKEQLKSFVRTL--GDVGNVSVAFYGGESDMGETGYSVALKA-TSDVNRAAEALDNIPIVA--DGPRTSITAMWSIMQHQDGTIPLGLFANRRIIVLVGDTPGREPEC---------RHGIKSDRMSFSSQRTRVMVVNLASPGLNAALPAPAACGY--------------ITSAAIPEGQGTRLADTSEGELISQVTSSKLRESILKL----RMNAANGLHGKGSHISVLSKTYTYTEYTCPSSFCARTITTKGCDDRVIIRKSNIPDFAHGPVQMTGKISLSLPAGICQRGPFYCEVEVKE-RLERFSYSHWSLPQRHTHLIGVKAC 340          
The following BLAST results are available for this feature:
BLAST of Gvermi1852.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IDQ9_9FLOR3.220e-11646.37Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IME3_9FLOR2.920e-3830.00VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGI2_9FLOR1.000e-2928.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEV7_9FLOR5.280e-1523.55VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 100..237
e-value: 6.8E-7
score: 31.4
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 102..220
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..422
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availableCDDcd00198vWFAcoord: 103..191
e-value: 0.00621334
score: 35.2342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1622contigScGOVlb_1622:227383..228651 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi1852.t1Gvermi1852.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1622 227383..228651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi1852.t1 ID=Gvermi1852.t1|Name=Gvermi1852.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=423bp
MISLLIFLGVLAISVEVRAQAPTCRDRGLFSHVRCESLWPNEECTAAAQF
GCLVSGCDCVLNQTIADSNPCPNNERPIDALSLSSPRSSVNFRMGVNLLD
NRLNVLLLIDASPSMAAQFPTVLPELSALAHELIVNLSAIVAVAVYGGEQ
SFDTFDAFQTLQSFTSNASAIQSALRTIPTLTLQNGPRLLLRAIEDSRSA
NIGWTGFNARRIIIVVGDTPGREPACATSDFQKVLNRSTLFDFLDLGFTK
FSFIAASVGQPGLDAALPQLPQCPFRPLCLLVFCQRSEPALGVAVAPGQL
STLASRANGSFISNFSKTAVYEAVLDILQQPKFQPIDGLLFRDTEDAITP
VSMDTCGNRVVVERPSLPKVLPALSFLTIDFTVSLADRACDDGPFDCTLT
IAESRNSTFVFELEMLSVKACF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf