Gvermi6752.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6752.t1
Unique NameGvermi6752.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length104
Homology
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BLAST of Gvermi6752.t1 vs. uniprot
Match: A0A2V3J3U1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3U1_9FLOR)

HSP 1 Score: 107 bits (267), Expect = 3.180e-28
Identity = 66/104 (63.46%), Postives = 75/104 (72.12%), Query Frame = 0 
Query:    3 SSSKAPSDADQ---PMSPLATFRVPFLSLNPALSSPPAMALTRARSLPVTPVCEPPSPAVRAPPPLHSPSASLSDLDVVSEPLTHTQRVARATREFRDAWIVME 103
            S+ K PS  D    PMSPL+ FRVP LSLNPALSSPP+ +L+R RSLP++P  EP     R P P     ASL+DLD+  E LTHTQRVARATREFRDAWIVME
Sbjct:    7 SAPKTPSSIDTDPTPMSPLSAFRVPMLSLNPALSSPPSFSLSRTRSLPISPSSEP-----RTPLPSPGLQASLTDLDL-PERLTHTQRVARATREFRDAWIVME 104
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BLAST of Gvermi6752.t1 vs. uniprot
Match: R7Q435_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q435_CHOCR)

HSP 1 Score: 53.5 bits (127), Expect = 2.830e-7
Identity = 36/87 (41.38%), Postives = 42/87 (48.28%), Query Frame = 0 
Query:   17 PLATFRVPFLSLNPALSSPPAMALTRARSLPVTPVCEPPSPAVRAPPPLHSPSASLSDLDVVSEPLTHTQRVARATREFRDAWIVME 103
            P +  R P L+LNP   S P ++L+       TP   PPSPA+  P                    TH QRVARATREFRD WIV E
Sbjct:   20 PSSLLRSPLLALNPVFPSSPRLSLSDR-----TPSTPPPSPALNRP--------------------THVQRVARATREFRDVWIVPE 81
The following BLAST results are available for this feature:
BLAST of Gvermi6752.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J3U1_9FLOR3.180e-2863.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q435_CHOCR2.830e-741.38Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2157819..2158130 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6752.t1Gvermi6752.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2157819..2158130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6752.t1 ID=Gvermi6752.t1|Name=Gvermi6752.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=104bp
MSSSSKAPSDADQPMSPLATFRVPFLSLNPALSSPPAMALTRARSLPVTP
VCEPPSPAVRAPPPLHSPSASLSDLDVVSEPLTHTQRVARATREFRDAWI
VME*
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