Gvermi6759.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6759.t1
Unique NameGvermi6759.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length356
Homology
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BLAST of Gvermi6759.t1 vs. uniprot
Match: A0A2V3J4M7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4M7_9FLOR)

HSP 1 Score: 307 bits (787), Expect = 3.610e-99
Identity = 185/334 (55.39%), Postives = 236/334 (70.66%), Query Frame = 0 
Query:   36 PSRAPHPPAHLIFEPHTSDVSDSASNDANQPPSHPDLVFIDDVPHIKFCNVGEEEEPLIPDASTPYCPTPAASLPNDSALHNLTAQNDRLAQENHALQRHNAALHAELDSVRTKSAALSAELATLTQEHNDARSKLSRRIRLLEAQLNAVNCASSS--------RPRASNP-PAPD--------PHSHPSSSR-AFARVQSLGSVSESSRRRSVRASAMAPPQAASLRRALEDDTHVASPASRARQGLIRRAFVAHIHAHRYRTARQAWVQFLGAERQQVTLNTFSTCVRNLAVASEATDRELQLLMQEICEVPVGHATAMTWNMFIRFYNSTK 351
            P + PH P + + + HTSDVSDS SN+    P   DL+FIDDVPHIK  NVGEEEEPLIPD ++ +   P +S  ++ + H + + NDRL QEN +LQ  N+ L +ELD+ R +++  SAEL +LT++  D RSKL+ RIR LE++L +  CA+S+        R RAS P P P         P S PS++  AF RVQS GSV+ES+RRRSVR SA    + +++RR ++ DT VASPA+RARQ LIRRAFVAHIHA +YRTARQAW+QFLGA RQ V L++F+ CVR LAVA+EA+DRELQLLMQEICEVPV   T MTW MF RFY+ST+
Sbjct:   53 PQKLPHNPTNPLLDAHTSDVSDSTSNEPTSSPDA-DLLFIDDVPHIKISNVGEEEEPLIPDNASSFN-VPLSSEQSNLSQHAMRSHNDRLLQENRSLQTQNSQLQSELDAHRARASTTSAELLSLTRQLADTRSKLNNRIRQLESELASATCATSTCTHHSRTARTRASVPSPVPTSPRTPNELPPSQPSTNHLAFNRVQSTGSVAESTRRRSVRHSASL--RNSTVRRVMDADTSVASPATRARQSLIRRAFVAHIHAQKYRTARQAWIQFLGAHRQAVELSSFAACVRGLAVAAEASDRELQLLMQEICEVPVSQHTVMTWAMFSRFYDSTR 382
The following BLAST results are available for this feature:
BLAST of Gvermi6759.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4M7_9FLOR3.610e-9955.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..188
NoneNo IPR availableGENE3D6.10.250.3110coord: 112..188
e-value: 1.2E-5
score: 27.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2169526..2170593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6759.t1Gvermi6759.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2169526..2170593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6759.t1 ID=Gvermi6759.t1|Name=Gvermi6759.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=356bp
MTLPPPTRRRFLSRSSSSRPPRRVFRRLSQRRTPSPSRAPHPPAHLIFEP
HTSDVSDSASNDANQPPSHPDLVFIDDVPHIKFCNVGEEEEPLIPDASTP
YCPTPAASLPNDSALHNLTAQNDRLAQENHALQRHNAALHAELDSVRTKS
AALSAELATLTQEHNDARSKLSRRIRLLEAQLNAVNCASSSRPRASNPPA
PDPHSHPSSSRAFARVQSLGSVSESSRRRSVRASAMAPPQAASLRRALED
DTHVASPASRARQGLIRRAFVAHIHAHRYRTARQAWVQFLGAERQQVTLN
TFSTCVRNLAVASEATDRELQLLMQEICEVPVGHATAMTWNMFIRFYNST
KSAST*
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